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| Workflow name (+link) | Creation time | Last updated | License | EDAM topic(s) | EDAM operation(s) | Tag(s) | DOI | Source |
|---|---|---|---|---|---|---|---|---|
| 2023-01-09 | 2023-01-09 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2018-04-03 | 2018-04-08 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2024-08-30 | 2024-08-31 | Statistical calculation Sequence composition calculation Primer removal Validation Sequence trimming Box-Whisker plot plotting Sequencing quality control Read pre-processing Scatter plot plotting | https://usegalaxy.org.au | |||||
| 2023-07-24 | 2023-07-24 | Classification Visualisation Taxonomic classification | https://usegalaxy.eu | |||||
| 2015-04-11 | 2015-04-11 | https://usegalaxy.org | ||||||
| 2020-04-22 | 2020-04-22 | Statistical calculation Data handling Genome indexing Sequence composition calculation Read mapping Generation Sequence file editing Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2024-04-01 | 2024-04-01 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2024-03-23 | 2024-04-07 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2021-04-22 | 2024-06-30 | Read mapping Nucleic acid sequence analysis Sequencing quality control | https://usegalaxy.eu | |||||
| 2022-04-30 | 2022-05-03 | Statistical calculation RNA-Seq quantification Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming Read summarisation RNA-Seq analysis Read pre-processing Sequence alignment Sequencing quality control | https://usegalaxy.org.au | |||||
| 2023-01-09 | 2023-01-09 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2021-11-10 | 2023-12-07 | Validation RNA-Seq quantification Read mapping Read summarisation Sequencing quality control | metagenomics metatranscriptomics name:microGalaxy | https://usegalaxy.eu | ||||
| 2022-06-23 | 2022-06-28 | Statistical calculation Genome alignment Sequence composition calculation Genome indexing Read mapping Variant calling Validation Copy number estimation Generation Sequencing quality control Sequence alignment Sequence visualisation | MIRACUM | https://usegalaxy.eu | ||||
| 2020-05-19 | 2020-05-19 | https://usegalaxy.eu | ||||||
| 2022-05-20 | 2022-05-20 | Mapping | https://usegalaxy.org | |||||
| 2022-10-06 | 2022-10-06 | https://usegalaxy.org | ||||||
| 2023-04-25 | 2023-04-25 | Mapping Peak calling Enrichment analysis Gene regulatory network analysis | https://usegalaxy.org | |||||
| 2020-05-19 | 2020-05-19 | https://usegalaxy.eu | ||||||
| 2022-05-13 | 2022-05-20 | Genome visualisation Read mapping | https://usegalaxy.org | |||||
| 2021-01-03 | 2021-01-03 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2023-06-30 | 2023-07-06 | MIT | Taxonomic classification Phylogenetic inference Phylogenetic tree visualisation Visualisation Conversion Phylogenetic tree analysis Nucleic acid sequence analysis Phylogenetic tree editing | name:microGalaxy name:metatranscriptomics name:AdaptedASiam name:communityProfiling | https://usegalaxy.eu | |||
| 2023-06-30 | 2023-07-06 | MIT | Statistical calculation Sequence alignment analysis Sequence composition calculation Sequence comparison Primer removal Validation Sequence trimming Read pre-processing Sequence similarity search Sequencing quality control | name:microGalaxy name:AdaptedASiam name:metatranscriptomics name:preprocessing | https://usegalaxy.eu | |||
| 2024-02-02 | 2024-02-03 | Genome assembly De-novo assembly Aggregation Pairwise sequence alignment Sequence analysis Box-Whisker plot plotting Mapping assembly Sequence assembly visualisation Scatter plot plotting | https://usegalaxy.org.au | |||||
| 2022-11-30 | 2022-11-30 | Statistical calculation Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.org | |||||
| 2019-05-07 | 2019-05-08 | Statistical calculation Data handling Sequence composition calculation Primer removal Sequence trimming RNA-Seq analysis Read pre-processing Sequence alignment Nucleic acid sequence analysis Sequencing quality control | https://usegalaxy.org | |||||
| 2021-09-14 | 2021-09-21 | Differential gene expression analysis | scRNAseq single-cell transcriptomics | https://usegalaxy.org.au | ||||
| 2020-03-21 | 2020-03-21 | https://usegalaxy.org | ||||||
| 2020-03-22 | 2020-03-22 | https://usegalaxy.org | ||||||
| 2015-06-20 | 2015-06-20 | Genome indexing Generation Read mapping Sequence alignment | https://usegalaxy.org | |||||
| 2023-05-02 | 2023-05-02 | Statistical calculation Formatting RNA-Seq quantification Sequence alignment Data handling Gene functional annotation Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2024-01-13 | 2024-01-13 | Validation Statistical calculation Sequence composition calculation Read mapping Sequencing quality control | https://usegalaxy.org | |||||
| 2022-05-22 | 2022-05-23 | Statistical calculation Formatting De-novo assembly Sequence composition calculation Validation Visualisation Sequence assembly validation Sequencing quality control | https://usegalaxy.org | |||||
| 2024-08-31 | 2024-08-31 | Box-Whisker plot plotting Scatter plot plotting | https://usegalaxy.org.au | |||||
| 2024-08-31 | 2024-08-31 | Statistical calculation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2016-11-09 | 2016-11-11 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2022-08-21 | 2022-08-21 | https://usegalaxy.org | ||||||
| 2023-01-02 | 2023-01-06 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2019-03-29 | 2019-04-02 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2023-01-08 | 2023-01-08 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2016-05-30 | 2016-05-31 | Variant calling Formatting Read mapping Statistical calculation | https://usegalaxy.org | |||||
| 2015-12-22 | 2015-12-22 | Variant calling Formatting Read mapping Statistical calculation | https://usegalaxy.org | |||||
| 2019-05-22 | 2019-05-22 | https://usegalaxy.org | ||||||
| 2019-05-22 | 2019-05-22 | https://usegalaxy.org | ||||||
| 2024-05-18 | 2024-05-18 | Validation Statistical calculation Sequence trimming Sequence composition calculation Read pre-processing Primer removal Sequencing quality control | https://usegalaxy.eu | |||||
| 2017-02-10 | 2017-02-10 | https://usegalaxy.org | ||||||
| 2017-02-27 | 2017-02-27 | https://usegalaxy.org | ||||||
| 2024-01-13 | 2024-01-13 | Validation Variant calling Statistical calculation Sequence composition calculation Read mapping Sequencing quality control | https://usegalaxy.org | |||||
| 2021-12-29 | 2021-12-29 | https://usegalaxy.eu | ||||||
| 2018-10-17 | 2019-08-28 | https://usegalaxy.org | ||||||
| 2022-05-13 | 2022-05-20 | Statistical calculation Sequence trimming Sequence composition calculation Read pre-processing Primer removal Sequencing quality control | https://usegalaxy.org | |||||
| 2017-05-04 | 2018-03-01 | Formatting Genome indexing Generation Read mapping Sequence alignment | bwa-mem cleansam fixmate hg19 markduplicate filtersam | https://usegalaxy.org | ||||
| 2022-03-27 | 2022-03-27 | Visualisation Taxonomic classification Box-Whisker plot plotting Scatter plot plotting | https://usegalaxy.eu | |||||
| 2022-03-27 | 2022-03-28 | MIT | Sequencing quality control Base-calling Genome assembly De-novo assembly Filtering Variant calling Box-Whisker plot plotting Cross-assembly Mapping assembly Sequence assembly Sequence assembly visualisation Scatter plot plotting | https://usegalaxy.eu | ||||
| 2022-03-27 | 2022-03-28 | MIT | Genome assembly Coding region prediction Scaffolding Differential gene expression analysis Genome annotation Transcriptome assembly Sequence clustering Antimicrobial resistance prediction Gene prediction Sequence assembly validation | https://usegalaxy.eu | ||||
| 2017-05-02 | 2017-05-04 | https://usegalaxy.org | ||||||
| 2021-05-04 | 2022-01-24 | Filtering Formatting | https://usegalaxy.eu | |||||
| 2021-02-04 | 2023-02-13 | Apache-2.0 | Sequence database search Formatting Sequence profile generation Statistical calculation Format validation Variant calling Pairwise sequence alignment Sequence assembly Data retrieval Sequencing quality control Taxonomic classification Genome assembly Database search Sequence merging Sequence contamination filtering Visualisation Conversion Probabilistic sequence generation Sequence generation Multiple sequence alignment Read pre-processing | Virus exploration identification | WorkflowHub | |||
| 2020-06-24 | 2020-06-24 | Statistical calculation Aggregation Coding region prediction Pairwise sequence alignment Genome annotation Box-Whisker plot plotting Filtering Sequence assembly visualisation Sequence assembly validation Sequencing quality control Genome assembly Sequence composition calculation Mapping Validation Sequence contamination filtering Visualisation Gene prediction Scatter plot plotting | Hybrid Assembly ONT Unicycler StarAMR Bacterial Prokka | https://usegalaxy.eu | ||||
| 2020-06-24 | 2020-06-24 | Sequencing quality control Genome assembly Mapping Aggregation Coding region prediction Pairwise sequence alignment Genome annotation Visualisation Box-Whisker plot plotting Gene prediction Filtering Sequence assembly visualisation Sequence assembly validation Scatter plot plotting | Assembly ONT Unicycler StarAMR Bacterial Prokka Coverage | https://usegalaxy.eu | ||||
| 2020-06-24 | 2020-06-24 | Statistical calculation Genome assembly Sequence composition calculation Aggregation Coding region prediction Validation Sequence contamination filtering Genome annotation Visualisation Gene prediction Sequence assembly visualisation Sequence assembly validation Sequencing quality control | Assembly Unicycler StarAMR Bacterial Prokka Short-Read Illumina | https://usegalaxy.eu | ||||
| 2024-08-31 | 2024-08-31 | Validation Statistical calculation Sequence trimming Sequence composition calculation Read pre-processing Primer removal Sequencing quality control | https://usegalaxy.org.au | |||||
| 2024-08-31 | 2024-08-31 | Validation Statistical calculation Sequence trimming Sequence composition calculation Read pre-processing Primer removal Sequencing quality control | https://usegalaxy.org.au | |||||
| 2012-04-06 | 2013-07-04 | https://usegalaxy.org | ||||||
| 2021-01-24 | 2021-01-24 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.eu | |||||
| 2022-09-02 | 2023-12-12 | Read mapping | https://usegalaxy.eu | |||||
| 2022-01-12 | 2022-03-09 | Sequence analysis Sequence alignment analysis Sequence alignment Local alignment Global alignment | https://usegalaxy.org | |||||
| 2022-03-30 | 2022-06-06 | Validation Statistical calculation Sequence trimming Sequence composition calculation Read pre-processing Primer removal Sequencing quality control | https://usegalaxy.eu | |||||
| 2016-07-12 | 2021-05-24 | https://usegalaxy.eu | ||||||
| 2020-05-24 | 2020-08-22 | Community profiling Sequence alignment Loading | transcriptomics single-cell | https://usegalaxy.eu | ||||
| 2019-08-30 | 2019-08-30 | Community profiling Sequence alignment Loading | https://usegalaxy.eu | |||||
| 2018-09-22 | 2018-09-22 | Phylogenetic tree generation (maximum likelihood and Bayesian methods) Sequence read processing Phylogenetic analysis Taxonomic classification Phylogenetic tree generation (from molecular sequences) Visualisation Sequence clustering DNA barcoding Sequencing quality control | Metagenomics Mothur 16S | https://usegalaxy.eu | ||||
| 2021-08-09 | 2022-07-29 | Sequence read processing Phylogenetic analysis Taxonomic classification Visualisation Sequence clustering DNA barcoding Sequencing quality control | 16S mothur microbial microbiome OTU Cluster Rarefaction | https://usegalaxy.eu | ||||
| 2022-05-26 | 2022-05-29 | Sequence read processing Phylogenetic analysis Taxonomic classification Data handling Visualisation Sequence clustering DNA barcoding Sequencing quality control | https://usegalaxy.eu | |||||
| 2022-05-13 | 2022-05-29 | Sequence read processing Phylogenetic analysis Taxonomic classification Data handling Visualisation Sequence clustering DNA barcoding Sequencing quality control | https://usegalaxy.eu | |||||
| 2018-08-08 | 2018-08-08 | Sequence read processing Phylogenetic analysis Taxonomic classification Visualisation Sequence clustering DNA barcoding Sequencing quality control | https://usegalaxy.org | |||||
| 2021-08-11 | 2024-04-17 | GPL-3.0 | Metagenomics | Formatting | MetaDEGalaxy | WorkflowHub | ||
| 2019-03-21 | 2021-04-01 | Formatting | MetaDEGalaxy | https://usegalaxy.org.au | ||||
| 2021-11-10 | 2024-04-17 | GPL-3.0 | Metagenomics | Statistical calculation Formatting Genome indexing Sequence composition calculation Read mapping Chimera detection Generation DNA mapping Sequence alignment Sequencing quality control | MetaDEGalaxy | WorkflowHub | ||
| 2019-03-21 | 2021-04-01 | Statistical calculation Formatting Genome indexing Sequence composition calculation Read mapping Chimera detection Generation DNA mapping Sequence alignment Sequencing quality control | MetaDEGalaxy | https://usegalaxy.org.au | ||||
| 2021-11-10 | 2024-04-17 | GPL-3.0 | Metagenomics | Statistical calculation Formatting Genome indexing Sequence composition calculation Read mapping Sequence merging Chimera detection Generation DNA mapping Sequence alignment Sequencing quality control | MetaDEGalaxy | WorkflowHub | ||
| 2019-03-21 | 2021-04-01 | Statistical calculation Formatting Genome indexing Sequence composition calculation Read mapping Sequence merging Chimera detection Generation DNA mapping Sequence alignment Sequencing quality control | MetaDEGalaxy | https://usegalaxy.org.au | ||||
| 2019-08-07 | 2019-08-07 | Sequence read processing Phylogenetic analysis Taxonomic classification Primer removal Sequence trimming Visualisation Sequence clustering DNA barcoding Read pre-processing Sequencing quality control | https://usegalaxy.eu | |||||
| 2019-08-05 | 2019-08-05 | Sequence read processing Phylogenetic analysis Taxonomic classification Primer removal Sequence trimming Visualisation Sequence clustering DNA barcoding Read pre-processing Sequencing quality control | https://usegalaxy.eu | |||||
| 2021-02-04 | 2023-02-13 | Apache-2.0 | Visualisation Taxonomic classification | Virology kraken | WorkflowHub | |||
| 2021-06-17 | 2023-02-13 | Apache-2.0 | Visualisation Taxonomic classification | Virology kraken | WorkflowHub | |||
| 2018-08-16 | 2020-02-24 | Statistical calculation Formatting Sequence composition calculation Mapping Primer removal Validation Sequence trimming Read pre-processing Sequence alignment Nucleic acid sequence analysis Sequencing quality control | CLIP-Explorer | https://usegalaxy.eu | ||||
| 2018-08-16 | 2018-12-17 | Validation Sequence trimming Read pre-processing Primer removal Sequencing quality control | CLIP-Explorer | https://usegalaxy.eu | ||||
| 2023-07-13 | 2023-07-13 | https://usegalaxy.eu | ||||||
| 2022-12-05 | 2022-12-06 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Sequence trimming Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2024-09-05 | 2024-09-05 | Validation Statistical calculation Sequence trimming Sequence composition calculation Read pre-processing Primer removal Sequencing quality control | https://usegalaxy.org.au | |||||
| 2024-08-31 | 2024-08-31 | Box-Whisker plot plotting Scatter plot plotting | https://usegalaxy.org.au | |||||
| 2024-08-31 | 2024-08-31 | Box-Whisker plot plotting Scatter plot plotting | https://usegalaxy.org.au | |||||
| 2012-04-06 | 2013-07-04 | https://usegalaxy.org | ||||||
| 2022-03-30 | 2022-06-06 | Taxonomic classification Phylogenetic inference Phylogenetic tree visualisation Visualisation Conversion Phylogenetic tree analysis Nucleic acid sequence analysis Phylogenetic tree editing | https://usegalaxy.eu | |||||
| 2019-02-22 | 2019-02-22 | Statistical calculation Formatting Sequence alignment analysis Phylogenetic inference Primer removal Sequencing quality control Taxonomic classification Sequence composition calculation Sequence comparison Phylogenetic tree visualisation Sequence trimming Visualisation Conversion Read pre-processing Sequence similarity search Phylogenetic tree editing | https://usegalaxy.eu | |||||
| 2014-08-11 | 2015-05-20 | https://usegalaxy.org | ||||||
| 2015-07-01 | 2015-07-07 | Variant calling Statistical calculation Genome indexing Generation Read mapping Sequence alignment | https://usegalaxy.org | |||||
| 2014-02-08 | 2014-03-05 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org | |||||
| 2021-07-21 | 2021-07-21 | Validation Statistical calculation Genome assembly Sequence composition calculation Read mapping Sequencing quality control | https://usegalaxy.eu | |||||
| 2021-08-09 | 2021-09-02 | Read summarisation Sequence alignment RNA-Seq quantification | https://usegalaxy.org | |||||
| 2021-09-29 | 2024-06-30 | Read mapping Nucleic acid sequence analysis | https://usegalaxy.eu | |||||
| 2023-01-07 | 2023-01-07 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2010-10-22 | 2010-10-23 | https://usegalaxy.org | ||||||
| 2022-03-21 | 2022-03-25 | MIT | De-novo assembly Genome alignment Coding region prediction Variant calling Differential gene expression analysis Genome annotation Antimicrobial resistance prediction Box-Whisker plot plotting Sequence clustering Filtering Sequence assembly Sequence assembly visualisation Sequence assembly validation Sequencing quality control Base-calling Genome assembly Scaffolding Transcriptome assembly Cross-assembly Mapping assembly Gene prediction Sequence similarity search Scatter plot plotting | https://usegalaxy.eu | ||||
| 2021-02-04 | 2023-02-13 | Apache-2.0 | Variant calling Sequence contamination filtering Formatting Pairwise sequence alignment Genome assembly Read pre-processing Sequencing quality control | Assembly Virology blast mapping reads_selection | WorkflowHub | |||
| 2018-08-15 | 2020-02-24 | Statistical calculation Formatting Sequence composition calculation Mapping Primer removal Validation Sequence trimming Read pre-processing Sequence alignment Nucleic acid sequence analysis Sequencing quality control | CLIP-Explorer | https://usegalaxy.eu | ||||
| 2018-08-16 | 2020-02-24 | Statistical calculation Formatting Sequence composition calculation Mapping Primer removal Validation Variant calling Sequence trimming Sequence contamination filtering Read pre-processing Sequence alignment Nucleic acid sequence analysis Sequencing quality control | CLIP-Explorer | https://usegalaxy.eu | ||||
| 2023-06-22 | 2023-07-13 | Target-Decoy de Novo sequencing Tag-based peptide identification Expression analysis Protein identification | https://usegalaxy.eu | |||||
| 2018-08-16 | 2018-12-17 | Validation Sequence trimming Read pre-processing Primer removal Sequencing quality control | CLIP-Explorer | https://usegalaxy.eu | ||||
| 2022-12-06 | 2022-12-07 | RNA-Seq analysis | https://usegalaxy.eu | |||||
| 2024-09-05 | 2024-09-05 | Box-Whisker plot plotting Scatter plot plotting | https://usegalaxy.org.au | |||||
| 2018-02-27 | 2018-02-27 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2013-07-23 | 2013-07-23 | Formatting | RNAseq Illumina Tophat Cuffdiff | https://usegalaxy.org | ||||
| 2024-08-31 | 2024-08-31 | Statistical calculation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2024-08-31 | 2024-08-31 | Statistical calculation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2012-04-06 | 2013-07-04 | https://usegalaxy.org | ||||||
| 2012-04-06 | 2013-07-04 | https://usegalaxy.org | ||||||
| 2022-03-30 | 2022-06-06 | Sequence comparison Sequence alignment analysis Sequence similarity search | 3.24 | https://usegalaxy.eu | ||||
| 2021-02-04 | 2023-02-13 | Apache-2.0 | Sequence contamination filtering Genome assembly Sequencing quality control | DE_NOVO Virology exploration | WorkflowHub | |||
| 2018-08-16 | 2020-02-24 | Statistical calculation Formatting Sequence composition calculation Mapping Primer removal Validation Variant calling Sequence trimming Sequence contamination filtering Read pre-processing Sequence alignment Nucleic acid sequence analysis Sequencing quality control | CLIP-Explorer | https://usegalaxy.eu | ||||
| 2018-08-15 | 2020-02-24 | Statistical calculation Formatting Sequence composition calculation Mapping Primer removal Validation Variant calling Sequence trimming Sequence contamination filtering Read pre-processing Sequence alignment Nucleic acid sequence analysis Sequencing quality control | CLIP-Explorer | https://usegalaxy.eu | ||||
| 2021-07-15 | 2023-10-31 | https://usegalaxy.eu | ||||||
| 2024-09-05 | 2024-09-05 | Statistical calculation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2020-02-24 | 2020-03-02 | Variant calling Formatting Statistical calculation | VCF variant | https://usegalaxy.org | ||||
| 2022-05-10 | 2022-05-24 | Phylogenetic analysis Taxonomic classification Species frequency estimation | https://usegalaxy.eu | |||||
| 2012-04-06 | 2013-07-04 | https://usegalaxy.org | ||||||
| 2018-03-20 | 2018-03-29 | Sequence composition calculation Statistical calculation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2023-07-10 | 2023-07-11 | Pairwise sequence alignment Sequence analysis Sequence alignment analysis Sequence alignment Local alignment Global alignment | https://usegalaxy.eu | |||||
| 2023-06-27 | 2023-07-10 | Pairwise sequence alignment Sequence analysis Sequence alignment analysis Sequence alignment Local alignment Global alignment | https://usegalaxy.org | |||||
| 2024-04-11 | 2024-04-11 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2018-08-15 | 2020-02-24 | Statistical calculation Formatting Sequence composition calculation Mapping Primer removal Validation Variant calling Sequence trimming Sequence contamination filtering Read pre-processing Sequence alignment Nucleic acid sequence analysis Sequencing quality control | CLIP-Explorer | https://usegalaxy.eu | ||||
| 2012-04-06 | 2013-07-04 | https://usegalaxy.org | ||||||
| 2012-04-06 | 2013-07-04 | https://usegalaxy.org | ||||||
| 2022-05-10 | 2022-05-24 | Taxonomic classification Phylogenetic inference Phylogenetic tree visualisation Conversion Phylogenetic tree editing | https://usegalaxy.eu | |||||
| 2015-10-21 | 2015-10-21 | https://usegalaxy.org | ||||||
| 2022-09-01 | 2024-07-12 | Peak calling Read mapping Enrichment analysis Gene regulatory network analysis | https://usegalaxy.org | |||||
| 2022-03-30 | 2022-05-24 | Phylogenetic analysis Taxonomic classification Phylogenetic tree analysis Nucleic acid sequence analysis Species frequency estimation | https://usegalaxy.eu | |||||
| 2024-02-23 | 2024-03-14 | Statistical calculation Formatting Genome indexing Sequence composition calculation Read mapping Primer removal Sequence trimming Generation Read pre-processing Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2024-08-02 | 2024-08-02 | AGPL-3.0-or-later | Taxonomic classification Genome assembly Phylogenetic tree generation Multilocus sequence typing Aggregation Phylogenetic tree visualisation Sequence contamination filtering Variant calling Visualisation Genome annotation Antimicrobial resistance prediction Validation Sequence assembly validation Sequencing quality control | Brucella VETLAB | https://usegalaxy.eu | |||
| 2024-07-31 | 2024-08-02 | AGPL-3.0-or-later | Taxonomic classification Genome assembly Phylogenetic tree generation Genome indexing Multilocus sequence typing Genome alignment Aggregation Phylogenetic tree visualisation Sequence contamination filtering Variant calling Visualisation Genome annotation Antimicrobial resistance prediction Validation Sequence assembly validation Sequencing quality control | Salmonella VETLAB | https://usegalaxy.eu | |||
| 2024-03-28 | 2024-03-28 | CC-BY-4.0 | WorkflowHub | |||||
| 2024-03-28 | 2024-03-28 | https://usegalaxy.eu | ||||||
| 2016-03-07 | 2016-03-07 | https://usegalaxy.org | ||||||
| 2022-11-21 | 2024-05-27 | Mapping | https://usegalaxy.fr | |||||
| 2021-03-19 | 2021-03-19 | ecology galaxy-training-network | https://usegalaxy.org.au | |||||
| 2015-07-30 | 2018-08-15 | https://usegalaxy.org | ||||||
| 2015-07-31 | 2024-06-14 | https://usegalaxy.org | ||||||
| 2015-08-03 | 2016-04-14 | aptamer SELEX | https://usegalaxy.org | |||||
| 2013-08-03 | 2013-08-03 | https://usegalaxy.org | ||||||
| 2020-05-19 | 2020-05-19 | https://usegalaxy.eu | ||||||
| 2019-05-14 | 2020-05-19 | https://usegalaxy.eu | ||||||
| 2019-05-14 | 2020-05-19 | https://usegalaxy.eu | ||||||
| 2020-05-19 | 2020-05-19 | https://usegalaxy.eu | ||||||
| 2014-09-10 | 2014-09-22 | https://usegalaxy.eu | ||||||
| 2016-02-24 | 2016-02-24 | https://usegalaxy.eu | ||||||
| 2015-04-07 | 2015-04-21 | https://usegalaxy.org | ||||||
| 2019-09-16 | 2019-09-16 | https://usegalaxy.eu | ||||||
| 2020-04-09 | 2020-04-09 | statistics galaxy-training-network | https://usegalaxy.org.au | |||||
| 2020-01-09 | 2020-01-10 | ml | https://usegalaxy.eu | |||||
| 2020-01-09 | 2020-01-10 | ml | https://usegalaxy.eu | |||||
| 2020-04-09 | 2020-04-09 | statistics galaxy-training-network | https://usegalaxy.org.au | |||||
| 2011-11-13 | 2011-11-13 | https://usegalaxy.org | ||||||
| 2024-09-12 | 2024-10-01 | Sequence read processing Phylogenetic analysis Formatting Taxonomic classification Data handling Sequence file editing Demultiplexing Visualisation Sequence clustering DNA barcoding Sequencing quality control | https://usegalaxy.eu | |||||
| 2024-09-06 | 2024-10-01 | Sequence read processing Phylogenetic analysis Formatting Taxonomic classification Data handling Sequence file editing Demultiplexing Visualisation Sequence clustering DNA barcoding Sequencing quality control | https://usegalaxy.eu | |||||
| 2022-07-29 | 2023-01-16 | CC-BY-4.0 | WorkflowHub | |||||
| 2019-01-24 | 2019-03-04 | Sequence alignment | https://usegalaxy.org | |||||
| 2023-03-24 | 2023-03-24 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2020-12-04 | 2020-12-15 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2023-11-28 | 2023-11-28 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2022-01-08 | 2022-01-08 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2019-03-05 | 2019-03-05 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2018-02-28 | 2018-04-04 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2018-02-23 | 2018-02-26 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2023-11-27 | 2023-11-27 | https://usegalaxy.org | ||||||
| 2019-03-04 | 2019-03-04 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2021-01-07 | 2021-01-07 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2022-11-25 | 2022-11-25 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2023-04-12 | 2024-06-24 | MIT | Variant calling Pairwise sequence alignment | name:Collection name:microGalaxy name:PathoGFAIR name:IWC | https://usegalaxy.eu | |||
| 2024-06-25 | 2024-06-25 | MIT | Variant calling Pairwise sequence alignment | name:Collection name:microGalaxy name:PathoGFAIR name:IWC | https://usegalaxy.org | |||
| 2024-06-25 | 2024-06-25 | MIT | Variant calling Pairwise sequence alignment | name:Collection name:microGalaxy name:PathoGFAIR name:IWC | https://usegalaxy.org.au | |||
| 2024-09-19 | 2024-09-19 | MIT | Variant calling Pairwise sequence alignment | name:Collection name:microGalaxy name:PathoGFAIR name:IWC | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | MIT | Variant calling Pairwise sequence alignment | name:Collection name:microGalaxy name:PathoGFAIR name:IWC | https://usegalaxy.eu | |||
| 2024-07-04 | 2024-07-15 | MIT | Variant calling Pairwise sequence alignment | WorkflowHub | ||||
| 2024-04-30 | 2024-05-08 | Variant calling Sequence contamination filtering Formatting Statistical calculation Sequence alignment Sequencing quality control | https://usegalaxy.eu | |||||
| 2024-07-19 | 2024-07-19 | https://usegalaxy.eu | ||||||
| 2023-03-24 | 2023-03-24 | Variant calling Statistical calculation Formatting Sequence composition calculation Mapping Read mapping Sequencing quality control | https://usegalaxy.org | |||||
| 2024-01-10 | 2024-01-10 | Variant calling Statistical calculation Formatting Sequence composition calculation Mapping Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2020-11-22 | 2021-12-02 | Taxonomic classification Antimicrobial resistance prediction Genome assembly Multilocus sequence typing | https://usegalaxy.eu | |||||
| 2023-12-14 | 2023-12-14 | Sequence read processing Phylogenetic analysis Taxonomic classification Visualisation Sequence clustering DNA barcoding Sequencing quality control | metagenomics name:microGalaxy | https://usegalaxy.eu | ||||
| 2021-03-19 | 2021-03-19 | Sequence read processing Phylogenetic analysis Taxonomic classification Visualisation Sequence clustering DNA barcoding Sequencing quality control | metagenomics galaxy-training-network | https://usegalaxy.org.au | ||||
| 2024-09-19 | 2024-09-19 | GPL-3.0-or-later | Parsing Data handling Antimicrobial resistance prediction | fasta Genomics ABRomics antibiotic-resistance antimicrobial-resistance-genes antimicrobialresistance bacterial-genomics AMR AMR-detection | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | GPL-3.0-or-later | Parsing Data handling Antimicrobial resistance prediction | fasta Genomics ABRomics antibiotic-resistance antimicrobial-resistance-genes antimicrobialresistance bacterial-genomics AMR AMR-detection | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | GPL-3.0-or-later | Parsing Data handling Antimicrobial resistance prediction | fasta Genomics ABRomics antibiotic-resistance antimicrobial-resistance-genes antimicrobialresistance bacterial-genomics AMR AMR-detection | https://usegalaxy.org | |||
| 2024-09-19 | 2024-09-19 | GPL-3.0-or-later | Parsing Data handling Antimicrobial resistance prediction | fasta Genomics ABRomics antibiotic-resistance antimicrobial-resistance-genes antimicrobialresistance bacterial-genomics AMR AMR-detection | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | GPL-3.0-or-later | Parsing Data handling Antimicrobial resistance prediction | fasta Genomics ABRomics antibiotic-resistance antimicrobial-resistance-genes antimicrobialresistance bacterial-genomics AMR AMR-detection | https://usegalaxy.org | |||
| 2024-09-26 | 2024-09-26 | GPL-3.0-or-later | Parsing Data handling Antimicrobial resistance prediction | fasta Genomics ABRomics antibiotic-resistance antimicrobial-resistance-genes antimicrobialresistance bacterial-genomics AMR AMR-detection | https://usegalaxy.eu | |||
| 2024-09-26 | 2024-09-26 | GPL-3.0-or-later | Parsing Data handling Antimicrobial resistance prediction | fasta Genomics ABRomics antibiotic-resistance antimicrobial-resistance-genes antimicrobialresistance bacterial-genomics AMR AMR-detection | https://usegalaxy.org | |||
| 2024-10-17 | 2024-10-17 | GPL-3.0-or-later | Parsing Data handling Antimicrobial resistance prediction | fasta Genomics ABRomics antibiotic-resistance antimicrobial-resistance-genes antimicrobialresistance bacterial-genomics AMR AMR-detection | https://usegalaxy.eu | |||
| 2024-10-03 | 2024-10-03 | GPL-3.0-or-later | Parsing Data handling Antimicrobial resistance prediction | fasta Genomics ABRomics antibiotic-resistance antimicrobial-resistance-genes antimicrobialresistance bacterial-genomics AMR AMR-detection | https://usegalaxy.org | |||
| 2024-10-17 | 2024-10-17 | GPL-3.0-or-later | Parsing Data handling Antimicrobial resistance prediction | fasta Genomics ABRomics antibiotic-resistance antimicrobial-resistance-genes antimicrobialresistance bacterial-genomics AMR AMR-detection | https://usegalaxy.eu | |||
| 2024-10-17 | 2024-10-17 | GPL-3.0-or-later | Parsing Data handling Antimicrobial resistance prediction | fasta Genomics ABRomics antibiotic-resistance antimicrobial-resistance-genes antimicrobialresistance bacterial-genomics AMR AMR-detection | https://usegalaxy.org | |||
| 2024-10-12 | 2024-10-12 | GPL-3.0-or-later | Parsing Data handling Antimicrobial resistance prediction | ABRomics AMR AMR-detection Genomics antibiotic-resistance antimicrobial resistance antimicrobial-resistance-genes bacterial-genomics fasta | WorkflowHub | |||
| 2023-05-17 | 2023-05-17 | Sequence contamination filtering Statistical calculation Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2023-05-15 | 2023-05-15 | https://usegalaxy.eu | ||||||
| 2023-05-17 | 2023-05-17 | Sequence contamination filtering Statistical calculation Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2023-05-19 | 2023-05-19 | Sequence contamination filtering Statistical calculation Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2023-05-17 | 2023-05-17 | Sequence contamination filtering Statistical calculation Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2023-05-17 | 2023-05-17 | Sequence contamination filtering Statistical calculation Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2023-05-15 | 2023-05-15 | Sequence contamination filtering Statistical calculation Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2023-05-17 | 2023-05-17 | Sequence contamination filtering Statistical calculation Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2023-05-18 | 2023-05-18 | Sequence contamination filtering Statistical calculation Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2024-03-14 | 2024-03-27 | CC-BY-4.0 | Ocean Pangeo earth-system | https://usegalaxy.eu | ||||
| 2019-01-23 | 2019-01-23 | Multiple sequence alignment Nucleic acid feature detection | RNA Alignment MSA Folding Structure Sequence | https://usegalaxy.eu | ||||
| 2023-10-26 | 2024-04-05 | CC-BY-4.0 | Metagenomic sequencing Metagenomics | Phylogenetic tree analysis Visualisation Nucleic acid sequence analysis | GUCFG2galaxy Metagenomics shotgun | WorkflowHub | ||
| 2023-06-06 | 2023-10-26 | Phylogenetic tree analysis Visualisation Nucleic acid sequence analysis | metagenomics GUCFG2Galaxy shotgun | https://usegalaxy.org.au | ||||
| 2024-04-10 | 2024-04-10 | Differential gene expression analysis RNA-Seq analysis | https://usegalaxy.org.au | |||||
| 2024-03-23 | 2024-03-25 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2021-05-06 | 2021-05-06 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org | |||||
| 2023-05-04 | 2023-05-04 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2019-04-30 | 2019-04-30 | https://usegalaxy.eu | ||||||
| 2012-12-17 | 2012-12-17 | https://usegalaxy.org | ||||||
| 2021-03-19 | 2021-03-19 | imaging galaxy-training-network | https://usegalaxy.org.au | |||||
| 2023-11-09 | 2023-11-09 | CC-BY-4.0 | Biodiversity Ecology | WorkflowHub | ||||
| 2023-06-14 | 2023-07-13 | https://usegalaxy.eu | ||||||
| 2023-06-03 | 2023-07-13 | https://usegalaxy.eu | ||||||
| 2023-06-09 | 2023-07-13 | https://usegalaxy.eu | ||||||
| 2023-05-08 | 2023-07-13 | https://usegalaxy.eu | ||||||
| 2023-07-05 | 2023-07-13 | https://usegalaxy.eu | ||||||
| 2022-09-19 | 2022-09-19 | name:trajectory_analysis name:transcriptomics name:scRNA-seq name:AnnData2Monocle | https://usegalaxy.eu | |||||
| 2023-12-13 | 2023-12-14 | CC-BY-4.0 | https://usegalaxy.eu | |||||
| 2023-12-12 | 2023-12-15 | CC-BY-4.0 | Community profiling Loading | https://usegalaxy.eu | ||||
| 2023-12-12 | 2023-12-15 | CC-BY-4.0 | Community profiling Loading | https://usegalaxy.eu | ||||
| 2023-03-23 | 2023-03-23 | Peak detection Mass spectrum visualisation Chromatogram visualisation Validation Chromatographic alignment Filtering Label-free quantification | https://usegalaxy.fr | |||||
| 2015-05-18 | 2015-05-18 | https://usegalaxy.eu | ||||||
| 2021-01-07 | 2021-01-07 | Differential gene expression analysis | https://usegalaxy.eu | |||||
| 2023-05-18 | 2023-05-18 | Sequence contamination filtering Statistical calculation Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2023-05-15 | 2023-05-15 | https://usegalaxy.eu | ||||||
| 2021-01-15 | 2021-01-15 | Validation Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2021-01-15 | 2021-01-15 | RNA-Seq analysis Annotation | https://usegalaxy.eu | |||||
| 2021-01-20 | 2021-01-20 | RNA-Seq analysis Annotation | https://usegalaxy.eu | |||||
| 2023-05-19 | 2023-05-19 | Sequence contamination filtering Statistical calculation Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2023-05-19 | 2023-05-19 | Sequence contamination filtering Statistical calculation Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2023-05-17 | 2023-05-17 | Sequence contamination filtering Statistical calculation Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2023-05-17 | 2023-05-17 | Sequence contamination filtering Statistical calculation Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2023-05-17 | 2023-05-17 | Sequence contamination filtering Statistical calculation Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2023-05-19 | 2023-05-19 | Sequence contamination filtering Statistical calculation Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2023-05-19 | 2023-05-19 | Sequence contamination filtering Statistical calculation Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2023-05-18 | 2023-05-18 | Sequence contamination filtering Statistical calculation Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2023-05-18 | 2023-05-18 | Sequence contamination filtering Statistical calculation Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2023-05-18 | 2023-05-18 | Sequence contamination filtering Statistical calculation Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2023-05-17 | 2023-05-17 | Sequence contamination filtering Statistical calculation Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2023-05-17 | 2023-05-17 | Sequence contamination filtering Statistical calculation Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2023-05-17 | 2023-05-17 | Sequence contamination filtering Statistical calculation Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2023-05-17 | 2023-05-17 | Sequence contamination filtering Statistical calculation Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2023-05-17 | 2023-05-17 | Sequence contamination filtering Statistical calculation Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2023-05-15 | 2023-05-15 | Sequence contamination filtering Statistical calculation Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2023-05-15 | 2023-05-15 | Sequence contamination filtering Statistical calculation Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2023-05-15 | 2023-05-15 | Sequence contamination filtering Statistical calculation Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2023-05-15 | 2023-05-15 | Sequence contamination filtering Statistical calculation Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2023-05-15 | 2023-05-15 | Sequence contamination filtering Statistical calculation Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2023-05-15 | 2023-05-15 | Sequence contamination filtering Statistical calculation Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2023-05-19 | 2023-05-19 | Sequence contamination filtering Statistical calculation Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2023-05-17 | 2023-05-17 | Sequence contamination filtering Statistical calculation Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2023-05-17 | 2023-05-17 | Sequence contamination filtering Statistical calculation Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2023-05-17 | 2023-05-17 | Sequence contamination filtering Statistical calculation Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2023-05-17 | 2023-05-17 | Sequence contamination filtering Statistical calculation Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2023-05-17 | 2023-05-17 | Sequence contamination filtering Statistical calculation Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2023-05-19 | 2023-05-19 | Sequence contamination filtering Statistical calculation Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2023-05-17 | 2023-05-17 | Sequence contamination filtering Statistical calculation Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2023-05-18 | 2023-05-18 | Sequence contamination filtering Statistical calculation Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2023-05-18 | 2023-05-18 | Sequence contamination filtering Statistical calculation Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2023-05-18 | 2023-05-18 | Sequence contamination filtering Statistical calculation Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2023-05-18 | 2023-05-18 | Sequence contamination filtering Statistical calculation Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2023-05-18 | 2023-05-18 | Sequence contamination filtering Statistical calculation Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2023-05-17 | 2023-05-17 | Sequence contamination filtering Statistical calculation Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2021-04-09 | 2021-04-10 | Statistical calculation RNA-Seq quantification Sequence composition calculation Validation Differential gene expression analysis RNA-Seq analysis Visualisation Read summarisation Transcriptome assembly Sequence alignment Sequencing quality control | https://usegalaxy.eu | |||||
| 2023-12-14 | 2023-12-14 | Genome visualisation | genome-annotation name:microGalaxy | https://usegalaxy.eu | ||||
| 2019-01-23 | 2019-01-23 | Mapping | RNA CLIP-seq | https://usegalaxy.eu | ||||
| 2023-09-20 | 2023-09-20 | https://usegalaxy.eu | ||||||
| 2023-04-20 | 2023-05-08 | Statistical calculation Data handling Sequence composition calculation Sequence alignment Sequencing quality control | https://usegalaxy.eu | |||||
| 2021-06-04 | 2021-06-04 | COVID-19 covid19.galaxyproject.org | https://usegalaxy.fr | |||||
| 2021-05-03 | 2021-05-21 | COVID-19 covid19.galaxyproject.org | https://usegalaxy.eu | |||||
| 2021-03-15 | 2022-03-11 | Validation Statistical calculation Data handling Sequence composition calculation Sequence alignment Sequencing quality control | https://usegalaxy.eu | |||||
| 2018-01-17 | 2018-08-03 | Statistical calculation Genome assembly Sequence composition calculation Read mapping Primer removal Validation Sequence trimming Visualisation Sequence assembly visualisation Sequence assembly Read pre-processing Sequence assembly validation Sequencing quality control | ASaiM | https://usegalaxy.eu | ||||
| 2018-01-17 | 2018-08-03 | Statistical calculation Genome assembly Sequence composition calculation Read mapping Primer removal Validation Sequence trimming Visualisation Sequence assembly visualisation Sequence assembly Read pre-processing Sequence assembly validation Sequencing quality control | ASaiM | https://usegalaxy.eu | ||||
| 2018-09-04 | 2018-09-26 | Statistical calculation Formatting Sequence alignment analysis Phylogenetic inference Primer removal Read pre-processing Sequencing quality control Taxonomic classification Sequence composition calculation Sequence comparison Phylogenetic tree visualisation Sequence trimming Visualisation Chimera detection Conversion DNA mapping Sequence similarity search Phylogenetic tree editing | https://usegalaxy.eu | |||||
| 2018-01-16 | 2018-08-03 | Statistical calculation Formatting Sequence alignment analysis Phylogenetic inference Primer removal Read pre-processing Sequencing quality control Taxonomic classification Sequence composition calculation Sequence comparison Phylogenetic tree visualisation Sequence trimming Visualisation Chimera detection Conversion DNA mapping Sequence similarity search Phylogenetic tree editing | https://usegalaxy.eu | |||||
| 2018-04-30 | 2018-04-30 | ASaiM | https://usegalaxy.eu | |||||
| 2018-01-29 | 2018-04-30 | ASaiM | https://usegalaxy.eu | |||||
| 2020-12-04 | 2020-12-04 | Statistical calculation Formatting Taxonomic classification Sequence alignment analysis Phylogenetic inference Sequence composition calculation Sequence comparison Primer removal Phylogenetic tree visualisation Validation Sequence trimming Visualisation Conversion Read pre-processing Sequence similarity search Phylogenetic tree editing Sequencing quality control | ASaiM | https://usegalaxy.eu | ||||
| 2023-05-17 | 2023-05-17 | Formatting Taxonomic classification Phylogenetic inference Phylogenetic tree visualisation Visualisation Conversion Phylogenetic tree editing | ASaiM | https://usegalaxy.eu | ||||
| 2016-09-17 | 2016-09-18 | asbmr2016 | https://usegalaxy.org | |||||
| 2023-01-03 | 2023-01-20 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Read pre-processing Sequence assembly validation Sequencing quality control | VGP_curated | https://usegalaxy.eu | |||
| 2023-01-11 | 2023-01-17 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Read pre-processing Sequence assembly validation Sequencing quality control | VGP PAG2023 | https://usegalaxy.eu | |||
| 2021-11-08 | 2023-01-30 | Apache-2.0 | Sequence assembly | Variant calling Sequence assembly Base-calling | Large-genome-assembly | WorkflowHub | ||
| 2021-08-03 | 2021-11-09 | Variant calling Sequence assembly Base-calling | LG-WF | https://usegalaxy.org.au | ||||
| 2023-09-14 | 2023-09-14 | MIT | Pairwise sequence alignment Genome assembly Mapping assembly | https://usegalaxy.eu | ||||
| 2023-09-14 | 2023-09-14 | MIT | Pairwise sequence alignment Genome assembly Mapping assembly | https://usegalaxy.org | ||||
| 2023-09-14 | 2023-09-14 | MIT | Pairwise sequence alignment Genome assembly Mapping assembly | https://usegalaxy.org.au | ||||
| 2022-12-13 | 2023-01-18 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Sequence trimming Transcriptome assembly Read pre-processing Sequence assembly validation | VGP_curated | https://usegalaxy.eu | |||
| 2020-06-18 | 2023-02-13 | Apache-2.0 | Sequence database search Formatting Sequence profile generation Statistical calculation de Novo sequencing Format validation De-novo assembly Read mapping Coding region prediction Differential gene expression analysis Sequence clustering Generation Data retrieval Sequencing quality control Data handling Genome indexing Database search Sequence annotation Validation Sequence contamination filtering Gene prediction Conversion Probabilistic sequence generation Sequence generation Multiple sequence alignment Sequence alignment | Alignment Annotation Assembly RNASEQ Tophat2 covid-19 | WorkflowHub | |||
| 2020-06-18 | 2023-02-13 | Apache-2.0 | Sequence database search Formatting Sequence profile generation Statistical calculation de Novo sequencing Format validation De-novo assembly Coding region prediction Differential gene expression analysis Sequence clustering Data retrieval Sequencing quality control Data handling Database search Sequence annotation Validation Sequence contamination filtering Conversion Probabilistic sequence generation Multiple sequence alignment Sequence generation Gene prediction | Alignment Assembly Galaxy RNASEQ Tophat2 covid-19 | WorkflowHub | |||
| 2021-11-08 | 2023-01-30 | Apache-2.0 | Sequence assembly | Visualisation Cross-assembly Mapping assembly Genome assembly De-novo assembly Sequence assembly visualisation Sequence assembly validation | Large-genome-assembly | WorkflowHub | ||
| 2021-05-26 | 2021-11-09 | Visualisation Cross-assembly Mapping assembly Genome assembly De-novo assembly Sequence assembly visualisation Sequence assembly validation | LG-WF | https://usegalaxy.org.au | ||||
| 2023-01-14 | 2023-03-03 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Read pre-processing Sequence assembly visualisation Sequence assembly validation Sequencing quality control | VGP PAG2023 | https://usegalaxy.eu | |||
| 2023-01-03 | 2023-01-09 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Read pre-processing Sequence assembly visualisation Sequence assembly validation Sequencing quality control | VGP_curated | https://usegalaxy.eu | |||
| 2022-05-13 | 2022-05-20 | Statistical calculation Formatting De-novo assembly Sequence composition calculation Validation Visualisation Sequence assembly validation Sequencing quality control | https://usegalaxy.org | |||||
| 2024-07-08 | 2024-07-08 | BSD-3-Clause | Taxonomic classification Data handling | VGP_curated | https://usegalaxy.org | |||
| 2023-11-09 | 2023-11-09 | BSD-3-Clause | Taxonomic classification Data handling | VGP_curated | https://usegalaxy.eu | |||
| 2023-11-09 | 2023-11-09 | BSD-3-Clause | Taxonomic classification Data handling | VGP_curated | https://usegalaxy.org | |||
| 2023-11-13 | 2023-11-13 | BSD-3-Clause | Taxonomic classification Data handling | VGP_curated | https://usegalaxy.org.au | |||
| 2023-11-16 | 2023-11-16 | BSD-3-Clause | Taxonomic classification Data handling | VGP_curated | https://usegalaxy.eu | |||
| 2023-11-16 | 2023-11-16 | BSD-3-Clause | Taxonomic classification Data handling | VGP_curated | https://usegalaxy.org | |||
| 2023-11-16 | 2023-11-16 | BSD-3-Clause | Taxonomic classification Data handling | VGP_curated | https://usegalaxy.org.au | |||
| 2023-11-30 | 2023-11-30 | BSD-3-Clause | Taxonomic classification Data handling | VGP_curated | https://usegalaxy.eu | |||
| 2023-11-23 | 2023-11-23 | BSD-3-Clause | Taxonomic classification Data handling | VGP_curated | https://usegalaxy.org | |||
| 2023-12-21 | 2023-12-21 | BSD-3-Clause | Taxonomic classification Data handling | VGP_curated | https://usegalaxy.org.au | |||
| 2023-11-30 | 2023-11-30 | BSD-3-Clause | Taxonomic classification Data handling | VGP_curated | https://usegalaxy.eu | |||
| 2023-11-30 | 2023-11-30 | BSD-3-Clause | Taxonomic classification Data handling | VGP_curated | https://usegalaxy.org | |||
| 2023-12-21 | 2023-12-21 | BSD-3-Clause | Taxonomic classification Data handling | VGP_curated | https://usegalaxy.org.au | |||
| 2024-03-14 | 2024-03-14 | BSD-3-Clause | Taxonomic classification Data handling | VGP_curated | https://usegalaxy.eu | |||
| 2024-03-14 | 2024-03-14 | BSD-3-Clause | Taxonomic classification Data handling | VGP_curated | https://usegalaxy.org | |||
| 2024-03-21 | 2024-03-21 | BSD-3-Clause | Taxonomic classification Data handling | VGP_curated | https://usegalaxy.org.au | |||
| 2024-09-26 | 2024-09-26 | BSD-3-Clause | Taxonomic classification Data handling | VGP_curated | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | BSD-3-Clause | Taxonomic classification Data handling | VGP_curated | https://usegalaxy.org | |||
| 2024-09-19 | 2024-09-19 | BSD-3-Clause | Taxonomic classification Data handling | VGP_curated | https://usegalaxy.org.au | |||
| 2024-09-26 | 2024-09-26 | BSD-3-Clause | Taxonomic classification Data handling | VGP_curated | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | BSD-3-Clause | Taxonomic classification Data handling | VGP_curated | https://usegalaxy.org | |||
| 2024-09-19 | 2024-09-19 | BSD-3-Clause | Taxonomic classification Data handling | VGP_curated | https://usegalaxy.org.au | |||
| 2024-09-26 | 2024-09-26 | BSD-3-Clause | Taxonomic classification Data handling | VGP_curated | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | BSD-3-Clause | Taxonomic classification Data handling | VGP_curated | https://usegalaxy.org | |||
| 2024-09-19 | 2024-09-19 | BSD-3-Clause | Taxonomic classification Data handling | VGP_curated | https://usegalaxy.org.au | |||
| 2024-10-07 | 2024-10-13 | BSD-3-Clause | Taxonomic classification Data handling | WorkflowHub | ||||
| 2023-11-09 | 2023-11-09 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Read pre-processing Sequence assembly visualisation Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.eu | |||
| 2023-11-09 | 2023-11-09 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Read pre-processing Sequence assembly visualisation Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.org | |||
| 2023-11-13 | 2023-11-13 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Read pre-processing Sequence assembly visualisation Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.org.au | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Read pre-processing Sequence assembly visualisation Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Read pre-processing Sequence assembly visualisation Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.org | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Read pre-processing Sequence assembly visualisation Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.org.au | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Read pre-processing Sequence assembly visualisation Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Read pre-processing Sequence assembly visualisation Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.org | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Read pre-processing Sequence assembly visualisation Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.org.au | |||
| 2023-11-09 | 2023-11-09 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Read pre-processing Sequence assembly visualisation Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.eu | |||
| 2023-11-09 | 2023-11-09 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Read pre-processing Sequence assembly visualisation Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.org | |||
| 2023-11-13 | 2023-11-13 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Read pre-processing Sequence assembly visualisation Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.org.au | |||
| 2023-11-09 | 2023-11-09 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Read pre-processing Sequence assembly visualisation Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.eu | |||
| 2023-11-09 | 2023-11-09 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Read pre-processing Sequence assembly visualisation Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.org | |||
| 2023-11-13 | 2023-11-13 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Read pre-processing Sequence assembly visualisation Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.org.au | |||
| 2023-11-13 | 2023-11-13 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Read pre-processing Sequence assembly visualisation Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.eu | |||
| 2023-11-09 | 2023-11-09 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Read pre-processing Sequence assembly visualisation Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.org | |||
| 2023-12-14 | 2023-12-14 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Read pre-processing Sequence assembly visualisation Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.org.au | |||
| 2023-11-23 | 2023-11-23 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Read pre-processing Sequence assembly visualisation Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.eu | |||
| 2023-11-23 | 2023-11-23 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Read pre-processing Sequence assembly visualisation Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.org | |||
| 2023-12-14 | 2023-12-14 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Read pre-processing Sequence assembly visualisation Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.org.au | |||
| 2023-11-30 | 2023-11-30 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Read pre-processing Sequence assembly visualisation Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.eu | |||
| 2023-11-30 | 2023-11-30 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Read pre-processing Sequence assembly visualisation Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.org | |||
| 2023-12-14 | 2023-12-14 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Read pre-processing Sequence assembly visualisation Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.org.au | |||
| 2024-03-28 | 2024-03-28 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Read pre-processing Sequence assembly visualisation Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Read pre-processing Sequence assembly visualisation Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Read pre-processing Sequence assembly visualisation Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.org | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Sequence assembly visualisation Read pre-processing Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Sequence assembly visualisation Read pre-processing Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.org | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Sequence assembly visualisation Read pre-processing Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.org.au | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Sequence assembly visualisation Read pre-processing Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Sequence assembly visualisation Read pre-processing Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.org | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Sequence assembly visualisation Read pre-processing Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.org.au | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Sequence assembly visualisation Read pre-processing Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Sequence assembly visualisation Read pre-processing Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.org | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Sequence assembly visualisation Read pre-processing Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.org.au | |||
| 2024-10-07 | 2024-10-07 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Read pre-processing Sequence assembly visualisation Sequence assembly validation Sequencing quality control | Reviewed vgp | WorkflowHub | |||
| 2023-10-26 | 2023-10-26 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Read pre-processing Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.eu | |||
| 2023-10-26 | 2023-10-26 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Read pre-processing Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.org | |||
| 2023-11-30 | 2023-11-30 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Read pre-processing Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.eu | |||
| 2023-11-30 | 2023-11-30 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Read pre-processing Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.org | |||
| 2024-01-18 | 2024-01-18 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Read pre-processing Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.eu | |||
| 2024-01-18 | 2024-01-18 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Read pre-processing Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.org | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Read pre-processing Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Read pre-processing Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Read pre-processing Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Read pre-processing Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.org | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Read pre-processing Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.org.au | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Read pre-processing Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Read pre-processing Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.org | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Read pre-processing Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Read pre-processing Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.org | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Read pre-processing Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.org.au | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Sequence assembly visualisation Read pre-processing Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Sequence assembly visualisation Read pre-processing Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.org | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Sequence assembly visualisation Read pre-processing Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.org.au | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Sequence assembly visualisation Read pre-processing Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Sequence assembly visualisation Read pre-processing Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.org | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Sequence assembly visualisation Read pre-processing Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.org.au | |||
| 2024-10-07 | 2024-10-13 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Sequence assembly visualisation Read pre-processing Sequence assembly validation Sequencing quality control | WorkflowHub | ||||
| 2023-11-09 | 2023-11-09 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Sequence trimming Transcriptome assembly Sequence assembly visualisation Read pre-processing Sequence assembly validation | VGP Reviewed | https://usegalaxy.eu | |||
| 2023-11-09 | 2023-11-09 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Sequence trimming Transcriptome assembly Sequence assembly visualisation Read pre-processing Sequence assembly validation | VGP Reviewed | https://usegalaxy.org | |||
| 2023-11-13 | 2023-11-13 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Sequence trimming Transcriptome assembly Sequence assembly visualisation Read pre-processing Sequence assembly validation | VGP Reviewed | https://usegalaxy.org.au | |||
| 2023-11-30 | 2023-11-30 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Sequence trimming Transcriptome assembly Sequence assembly visualisation Read pre-processing Sequence assembly validation | VGP Reviewed | https://usegalaxy.eu | |||
| 2023-11-30 | 2023-11-30 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Sequence trimming Transcriptome assembly Sequence assembly visualisation Read pre-processing Sequence assembly validation | VGP Reviewed | https://usegalaxy.org | |||
| 2023-12-07 | 2023-12-07 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Sequence trimming Transcriptome assembly Sequence assembly visualisation Read pre-processing Sequence assembly validation | VGP Reviewed | https://usegalaxy.org.au | |||
| 2024-01-18 | 2024-01-18 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Sequence trimming Transcriptome assembly Sequence assembly visualisation Read pre-processing Sequence assembly validation | VGP Reviewed | https://usegalaxy.eu | |||
| 2024-01-18 | 2024-01-18 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Sequence trimming Transcriptome assembly Sequence assembly visualisation Read pre-processing Sequence assembly validation | VGP Reviewed | https://usegalaxy.org | |||
| 2024-01-18 | 2024-01-18 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Sequence trimming Transcriptome assembly Sequence assembly visualisation Read pre-processing Sequence assembly validation | VGP Reviewed | https://usegalaxy.org.au | |||
| 2024-03-28 | 2024-03-28 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Read pre-processing Sequence assembly visualisation Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Read pre-processing Sequence assembly visualisation Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Read pre-processing Sequence assembly visualisation Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.org.au | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Read pre-processing Sequence assembly visualisation Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Read pre-processing Sequence assembly visualisation Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.org | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Read pre-processing Sequence assembly visualisation Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.org.au | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Read pre-processing Sequence assembly visualisation Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Read pre-processing Sequence assembly visualisation Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.org | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Read pre-processing Sequence assembly visualisation Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Read pre-processing Sequence assembly visualisation Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.org | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Read pre-processing Sequence assembly visualisation Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.org.au | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Sequence assembly visualisation Read pre-processing Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Sequence assembly visualisation Read pre-processing Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.org | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Sequence assembly visualisation Read pre-processing Sequence assembly validation Sequencing quality control | VGP Reviewed | https://usegalaxy.org.au | |||
| 2024-10-07 | 2024-10-07 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Validation Sequence trimming Transcriptome assembly Sequence assembly visualisation Read pre-processing Sequence assembly validation Sequencing quality control | WorkflowHub | ||||
| 2024-03-27 | 2024-06-13 | MIT | Visualisation Cross-assembly Mapping assembly Genome assembly De-novo assembly Sequence assembly visualisation Sequence assembly validation | WorkflowHub | ||||
| 2021-03-19 | 2021-03-19 | Data handling Genome assembly Read mapping Aggregation Pairwise sequence alignment Sequence contamination filtering Validation Box-Whisker plot plotting Sequence file editing Sequencing quality control Sequence assembly visualisation Scatter plot plotting | assembly galaxy-training-network | https://usegalaxy.org.au | ||||
| 2021-03-19 | 2021-03-19 | Data handling Genome assembly Read mapping Aggregation Pairwise sequence alignment Sequence contamination filtering Validation Box-Whisker plot plotting Sequence file editing Sequencing quality control Sequence assembly visualisation Scatter plot plotting | assembly galaxy-training-network | https://usegalaxy.org.au | ||||
| 2021-11-08 | 2023-01-30 | Apache-2.0 | Sequence assembly | Scaffolding Visualisation Transcriptome assembly Genome assembly Sequence assembly validation | Large-genome-assembly | WorkflowHub | ||
| 2021-07-27 | 2021-11-09 | Scaffolding Visualisation Transcriptome assembly Genome assembly Sequence assembly validation | LG-WF | https://usegalaxy.org.au | ||||
| 2023-12-11 | 2023-12-17 | https://usegalaxy.org | ||||||
| 2022-10-17 | 2022-10-17 | https://usegalaxy.eu | ||||||
| 2020-05-02 | 2020-05-03 | https://usegalaxy.org | ||||||
| 2024-01-09 | 2024-01-09 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2017-03-07 | 2017-03-22 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2023-05-04 | 2023-05-04 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2022-10-04 | 2024-02-22 | Statistical calculation Formatting Data handling Sequence alignment analysis Sequence composition calculation Mapping Read mapping Primer removal Sequence trimming Read pre-processing Sequencing quality control | https://usegalaxy.org | |||||
| 2019-07-24 | 2019-07-26 | Statistical calculation Data handling Sequence alignment analysis Sequence composition calculation Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATAC hg19 | https://usegalaxy.org | ||||
| 2020-08-31 | 2020-08-31 | Statistical calculation Formatting Data handling Sequence alignment analysis Sequence composition calculation Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Sequence trimming Visualisation Peak calling Read pre-processing Sequencing quality control | epigenetics galaxy-training-network | https://usegalaxy.org.au | ||||
| 2020-06-10 | 2020-06-10 | Statistical calculation Formatting Data handling Sequence alignment analysis Sequence composition calculation Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Sequence trimming Visualisation Peak calling Read pre-processing Sequencing quality control | atac-seq | https://usegalaxy.eu | ||||
| 2024-04-04 | 2024-06-27 | Validation Sequence contamination filtering Genome indexing Generation Read mapping Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2022-10-27 | 2022-10-27 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.eu | |||
| 2022-10-27 | 2022-10-27 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2022-10-27 | 2022-10-27 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org.au | |||
| 2024-03-21 | 2024-03-21 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.eu | |||
| 2024-03-21 | 2024-03-21 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.eu | |||
| 2024-03-28 | 2024-03-28 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.eu | |||
| 2024-04-11 | 2024-04-11 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-09-12 | 2024-09-12 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-09-05 | 2024-09-05 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-08-29 | 2024-08-29 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-08-22 | 2024-08-22 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-08-15 | 2024-08-15 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-08-08 | 2024-08-08 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-08-01 | 2024-08-01 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-07-25 | 2024-07-25 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-07-18 | 2024-07-18 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-07-11 | 2024-07-11 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-07-04 | 2024-07-04 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-06-27 | 2024-06-27 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-06-20 | 2024-06-20 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-06-13 | 2024-06-13 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-06-06 | 2024-06-06 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-05-30 | 2024-05-30 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-05-23 | 2024-05-23 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-05-16 | 2024-05-16 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-05-09 | 2024-05-09 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-05-02 | 2024-05-02 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-04-25 | 2024-04-25 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-09-19 | 2024-09-19 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-09-12 | 2024-09-12 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-09-05 | 2024-09-05 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-08-29 | 2024-08-29 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-08-22 | 2024-08-22 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-08-15 | 2024-08-15 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-08-08 | 2024-08-08 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-08-01 | 2024-08-01 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-07-25 | 2024-07-25 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-07-18 | 2024-07-18 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-07-11 | 2024-07-11 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-07-04 | 2024-07-04 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-06-27 | 2024-06-27 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-06-20 | 2024-06-20 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-06-13 | 2024-06-13 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-06-06 | 2024-06-06 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-05-30 | 2024-05-30 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-05-23 | 2024-05-23 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-05-16 | 2024-05-16 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-05-09 | 2024-05-09 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-05-02 | 2024-05-02 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-09-19 | 2024-09-19 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-09-12 | 2024-09-12 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-09-05 | 2024-09-05 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-08-29 | 2024-08-29 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-08-22 | 2024-08-22 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-08-15 | 2024-08-15 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-08-08 | 2024-08-08 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-08-01 | 2024-08-01 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-07-25 | 2024-07-25 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-07-18 | 2024-07-18 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-07-11 | 2024-07-11 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-07-04 | 2024-07-04 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-06-27 | 2024-06-27 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-06-20 | 2024-06-20 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-06-13 | 2024-06-13 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-06-06 | 2024-06-06 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-09-19 | 2024-09-19 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-09-12 | 2024-09-12 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-09-05 | 2024-09-05 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-08-29 | 2024-08-29 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-08-22 | 2024-08-22 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-08-15 | 2024-08-15 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-08-08 | 2024-08-08 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-08-01 | 2024-08-01 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-07-25 | 2024-07-25 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-07-18 | 2024-07-18 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-09-26 | 2024-09-26 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.eu | |||
| 2024-09-26 | 2024-09-26 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2022-12-01 | 2022-12-01 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.eu | |||
| 2022-12-01 | 2022-12-01 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2022-12-01 | 2022-12-01 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org.au | |||
| 2023-01-19 | 2023-01-19 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.eu | |||
| 2023-01-19 | 2023-01-19 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2023-01-19 | 2023-01-19 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org.au | |||
| 2023-01-19 | 2023-01-19 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.eu | |||
| 2023-01-19 | 2023-01-19 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2023-01-19 | 2023-01-19 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org.au | |||
| 2023-09-07 | 2023-09-07 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.eu | |||
| 2023-09-07 | 2023-09-07 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2023-09-28 | 2023-09-28 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.eu | |||
| 2023-09-28 | 2023-09-28 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2023-10-05 | 2023-10-05 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.eu | |||
| 2023-10-05 | 2023-10-05 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2023-11-02 | 2023-11-02 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.eu | |||
| 2023-11-09 | 2023-11-09 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2023-11-02 | 2023-11-02 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.eu | |||
| 2023-11-09 | 2023-11-09 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2023-11-02 | 2023-11-02 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.eu | |||
| 2023-11-09 | 2023-11-09 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | https://usegalaxy.org | |||
| 2024-10-07 | 2024-10-07 | MIT | Formatting Data handling Sequence alignment analysis Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ATACseq | WorkflowHub | |||
| 2020-01-03 | 2020-11-05 | https://usegalaxy.eu | ||||||
| 2019-10-22 | 2020-01-09 | https://usegalaxy.eu | ||||||
| 2024-08-20 | 2024-08-20 | Filtering Formatting | proteomics | https://usegalaxy.eu | ||||
| 2020-12-07 | 2020-12-07 | https://usegalaxy.eu | ||||||
| 2020-01-22 | 2020-10-01 | Sequencing quality control Filtering Box-Whisker plot plotting Scatter plot plotting | Avans Nanopore | https://usegalaxy.eu | ||||
| 2023-09-28 | 2023-09-28 | MIT | https://usegalaxy.eu | |||||
| 2023-09-28 | 2023-09-28 | MIT | https://usegalaxy.org | |||||
| 2023-10-05 | 2023-10-05 | MIT | https://usegalaxy.eu | |||||
| 2023-10-05 | 2023-10-05 | MIT | https://usegalaxy.org | |||||
| 2023-10-04 | 2024-06-13 | MIT | WorkflowHub | |||||
| 2023-05-19 | 2023-05-19 | Read mapping | https://usegalaxy.eu | |||||
| 2024-01-25 | 2024-01-25 | GPL-3.0-or-later | Genome annotation Protein feature detection Genome assembly Nucleic acid feature detection Structural variation detection Sequence motif recognition Scaffolding Multilocus sequence typing | genome-annotation | https://usegalaxy.fr | |||
| 2024-01-25 | 2024-01-25 | GPL-3.0-or-later | Protein feature detection Genome assembly Sequence motif recognition Scaffolding Genome annotation Antimicrobial resistance prediction Nucleic acid feature detection Structural variation detection Multilocus sequence typing | genome-annotation | https://usegalaxy.eu | |||
| 2021-07-27 | 2022-12-03 | Genome assembly Coding region prediction Validation Sequence contamination filtering Genome annotation Visualisation Antimicrobial resistance prediction Gene prediction Sequencing quality control Sequence assembly validation Multilocus sequence typing | assembly bacterial genome | https://usegalaxy.eu | ||||
| 2024-09-19 | 2024-09-19 | GPL-3.0-or-later | Parsing Visualisation Data handling Genome assembly Sequence assembly visualisation Sequence assembly validation | fastq Genomics bacterial-genomics paired-end assembly quality ABRomics | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | GPL-3.0-or-later | Parsing Visualisation Data handling Genome assembly Sequence assembly visualisation Sequence assembly validation | fastq Genomics bacterial-genomics paired-end assembly quality ABRomics | https://usegalaxy.org | |||
| 2024-09-19 | 2024-09-19 | GPL-3.0-or-later | Parsing Visualisation Data handling Genome assembly Sequence assembly visualisation Sequence assembly validation | fastq Genomics bacterial-genomics paired-end assembly quality ABRomics | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | GPL-3.0-or-later | Parsing Visualisation Data handling Genome assembly Sequence assembly visualisation Sequence assembly validation | fastq Genomics bacterial-genomics paired-end assembly quality ABRomics | https://usegalaxy.org | |||
| 2024-09-19 | 2024-09-19 | GPL-3.0-or-later | Parsing Visualisation Data handling Genome assembly Sequence assembly visualisation Sequence assembly validation | fastq Genomics bacterial-genomics paired-end assembly quality ABRomics | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | GPL-3.0-or-later | Parsing Visualisation Data handling Genome assembly Sequence assembly visualisation Sequence assembly validation | fastq Genomics bacterial-genomics paired-end assembly quality ABRomics | https://usegalaxy.org | |||
| 2024-09-26 | 2024-09-26 | GPL-3.0-or-later | Parsing Visualisation Data handling Genome assembly Sequence assembly visualisation Sequence assembly validation | fastq Genomics bacterial-genomics paired-end assembly quality ABRomics | https://usegalaxy.eu | |||
| 2024-09-26 | 2024-09-26 | GPL-3.0-or-later | Parsing Visualisation Data handling Genome assembly Sequence assembly visualisation Sequence assembly validation | fastq Genomics bacterial-genomics paired-end assembly quality ABRomics | https://usegalaxy.org | |||
| 2024-10-17 | 2024-10-17 | GPL-3.0-or-later | Parsing Visualisation Data handling Genome assembly Sequence assembly visualisation Sequence assembly validation | fastq Genomics bacterial-genomics paired-end assembly quality ABRomics | https://usegalaxy.eu | |||
| 2024-10-03 | 2024-10-03 | GPL-3.0-or-later | Parsing Visualisation Data handling Genome assembly Sequence assembly visualisation Sequence assembly validation | fastq Genomics bacterial-genomics paired-end assembly quality ABRomics | https://usegalaxy.org | |||
| 2024-08-02 | 2024-08-13 | Statistical calculation Genome assembly Sequence composition calculation Coding region prediction Genome annotation Visualisation Gene prediction Sequence assembly visualisation Sequence assembly validation Sequencing quality control | https://usegalaxy.eu | |||||
| 2021-03-26 | 2021-03-30 | Statistical calculation Genome assembly Sequence composition calculation Multilocus sequence typing Aggregation Coding region prediction Genome annotation Visualisation Antimicrobial resistance prediction Gene prediction Sequence assembly visualisation Sequence assembly validation Sequencing quality control | assembly unicycler hybrid wgs | https://usegalaxy.org | ||||
| 2021-03-17 | 2021-03-30 | Statistical calculation Genome assembly Sequence composition calculation Multilocus sequence typing Aggregation Coding region prediction Genome annotation Visualisation Antimicrobial resistance prediction Gene prediction Sequence assembly visualisation Sequence assembly validation Sequencing quality control | assembly pe unicycler wgs | https://usegalaxy.org | ||||
| 2016-06-26 | 2016-06-26 | Statistical calculation RNA-Seq analysis Transcriptome assembly Sequence composition calculation Sequencing quality control | https://usegalaxy.org | |||||
| 2024-10-07 | 2024-10-07 | GPL-3.0-or-later | Parsing Visualisation Data handling Genome assembly Sequence assembly visualisation Sequence assembly validation | ABRomics Assembly FASTQ Genomics bacterial-genomics paired-end quality | WorkflowHub | |||
| 2024-09-19 | 2024-09-19 | GPL-3.0-or-later | Parsing Protein feature detection Data handling Genome assembly Sequence motif recognition Scaffolding Genome annotation Nucleic acid feature detection Structural variation detection Multilocus sequence typing | Genomics fasta ABRomics bacterial-genomics Annotation genome-annotation | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | GPL-3.0-or-later | Parsing Protein feature detection Data handling Genome assembly Sequence motif recognition Scaffolding Genome annotation Nucleic acid feature detection Structural variation detection Multilocus sequence typing | Genomics fasta ABRomics bacterial-genomics Annotation genome-annotation | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | GPL-3.0-or-later | Parsing Protein feature detection Data handling Genome assembly Sequence motif recognition Scaffolding Genome annotation Nucleic acid feature detection Structural variation detection Multilocus sequence typing | Genomics fasta ABRomics bacterial-genomics Annotation genome-annotation | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | GPL-3.0-or-later | Parsing Protein feature detection Data handling Genome assembly Sequence motif recognition Scaffolding Genome annotation Nucleic acid feature detection Structural variation detection Multilocus sequence typing | Genomics fasta ABRomics bacterial-genomics Annotation genome-annotation | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | GPL-3.0-or-later | Parsing Protein feature detection Data handling Genome assembly Sequence motif recognition Scaffolding Genome annotation Nucleic acid feature detection Structural variation detection Multilocus sequence typing | Genomics fasta ABRomics bacterial-genomics Annotation genome-annotation | https://usegalaxy.eu | |||
| 2024-09-26 | 2024-09-26 | GPL-3.0-or-later | Parsing Protein feature detection Data handling Genome assembly Sequence motif recognition Scaffolding Genome annotation Nucleic acid feature detection Structural variation detection Multilocus sequence typing | Genomics fasta ABRomics bacterial-genomics Annotation genome-annotation | https://usegalaxy.org | |||
| 2024-09-26 | 2024-09-26 | GPL-3.0-or-later | Parsing Protein feature detection Data handling Genome assembly Sequence motif recognition Scaffolding Genome annotation Nucleic acid feature detection Structural variation detection Multilocus sequence typing | Genomics fasta ABRomics bacterial-genomics Annotation genome-annotation | https://usegalaxy.eu | |||
| 2024-09-26 | 2024-09-26 | GPL-3.0-or-later | Parsing Protein feature detection Data handling Genome assembly Sequence motif recognition Scaffolding Genome annotation Nucleic acid feature detection Structural variation detection Multilocus sequence typing | Genomics fasta ABRomics bacterial-genomics Annotation genome-annotation | https://usegalaxy.org | |||
| 2024-10-17 | 2024-10-17 | GPL-3.0-or-later | Parsing Protein feature detection Data handling Genome assembly Sequence motif recognition Scaffolding Genome annotation Nucleic acid feature detection Structural variation detection Multilocus sequence typing | Genomics fasta ABRomics bacterial-genomics Annotation genome-annotation | https://usegalaxy.eu | |||
| 2024-10-03 | 2024-10-03 | GPL-3.0-or-later | Parsing Protein feature detection Data handling Genome assembly Sequence motif recognition Scaffolding Genome annotation Nucleic acid feature detection Structural variation detection Multilocus sequence typing | Genomics fasta ABRomics bacterial-genomics Annotation genome-annotation | https://usegalaxy.org | |||
| 2024-10-17 | 2024-10-17 | GPL-3.0-or-later | Parsing Protein feature detection Data handling Genome assembly Sequence motif recognition Scaffolding Genome annotation Nucleic acid feature detection Structural variation detection Multilocus sequence typing | Genomics fasta ABRomics bacterial-genomics Annotation genome-annotation | https://usegalaxy.eu | |||
| 2024-10-17 | 2024-10-17 | GPL-3.0-or-later | Parsing Protein feature detection Data handling Genome assembly Sequence motif recognition Scaffolding Genome annotation Nucleic acid feature detection Structural variation detection Multilocus sequence typing | Genomics fasta ABRomics bacterial-genomics Annotation genome-annotation | https://usegalaxy.org | |||
| 2024-10-12 | 2024-10-12 | GPL-3.0-or-later | Parsing Protein feature detection Data handling Genome assembly Sequence motif recognition Scaffolding Genome annotation Nucleic acid feature detection Structural variation detection Multilocus sequence typing | ABRomics Annotation Genomics bacterial-genomics fasta genome-annotation | WorkflowHub | |||
| 2019-12-10 | 2019-12-12 | Statistical calculation Genome assembly Sequence composition calculation Coding region prediction Validation Genome annotation Antimicrobial resistance prediction Gene prediction Sequencing quality control Multilocus sequence typing | https://usegalaxy.eu | |||||
| 2020-07-30 | 2021-03-26 | Statistical calculation Genome indexing Sequence composition calculation Read mapping Primer removal Sequence trimming Generation Read pre-processing Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2019-05-14 | 2020-05-19 | https://usegalaxy.eu | ||||||
| 2019-05-14 | 2020-05-19 | https://usegalaxy.eu | ||||||
| 2017-08-14 | 2017-08-14 | Mapping | https://usegalaxy.org | |||||
| 2022-10-17 | 2023-01-30 | GPL-3.0 | Sequence assembly | Sequence composition calculation Formatting Statistical calculation Sequencing quality control | BAM Conversion FASTQ QC | WorkflowHub | ||
| 2021-09-08 | 2022-03-25 | GPL-3.0-or-later | Sequence composition calculation Formatting Statistical calculation Sequencing quality control | BAM FastQ Conversion QC | https://usegalaxy.org.au | |||
| 2022-10-10 | 2024-04-08 | Data handling RNA-Seq quantification Gene expression analysis Sequence composition calculation Sequence alignment | https://usegalaxy.eu | |||||
| 2019-01-18 | 2019-04-02 | Genome indexing Generation Read mapping Sequence alignment | https://usegalaxy.org | |||||
| 2012-12-06 | 2012-12-06 | https://usegalaxy.org | ||||||
| 2012-12-06 | 2012-12-06 | https://usegalaxy.org | ||||||
| 2024-06-01 | 2024-06-24 | MIT | Differential gene expression profiling Data retrieval Expression correlation analysis | WorkflowHub | ||||
| 2023-11-02 | 2023-11-02 | MIT | Differential gene expression profiling Data retrieval Expression correlation analysis | https://usegalaxy.eu | ||||
| 2023-11-09 | 2023-11-09 | MIT | Differential gene expression profiling Data retrieval Expression correlation analysis | https://usegalaxy.org | ||||
| 2024-09-19 | 2024-09-19 | MIT | Differential gene expression profiling Data retrieval Expression correlation analysis | https://usegalaxy.org.au | ||||
| 2023-12-07 | 2023-12-07 | MIT | Differential gene expression profiling Data retrieval Expression correlation analysis | https://usegalaxy.eu | ||||
| 2023-12-07 | 2023-12-07 | MIT | Differential gene expression profiling Data retrieval Expression correlation analysis | https://usegalaxy.org | ||||
| 2024-09-19 | 2024-09-19 | MIT | Differential gene expression profiling Data retrieval Expression correlation analysis | https://usegalaxy.org.au | ||||
| 2024-03-07 | 2024-03-07 | MIT | Differential gene expression profiling Data retrieval Expression correlation analysis | https://usegalaxy.eu | ||||
| 2024-03-07 | 2024-03-07 | MIT | Differential gene expression profiling Data retrieval Expression correlation analysis | https://usegalaxy.org | ||||
| 2024-09-19 | 2024-09-19 | MIT | Differential gene expression profiling Data retrieval Expression correlation analysis | https://usegalaxy.org.au | ||||
| 2024-04-11 | 2024-04-11 | MIT | Differential gene expression profiling Data retrieval Expression correlation analysis | https://usegalaxy.eu | ||||
| 2024-04-11 | 2024-04-11 | MIT | Differential gene expression profiling Data retrieval Expression correlation analysis | https://usegalaxy.org | ||||
| 2024-09-19 | 2024-09-19 | MIT | Differential gene expression profiling Data retrieval Expression correlation analysis | https://usegalaxy.org.au | ||||
| 2024-09-19 | 2024-09-19 | MIT | Differential gene expression profiling Data retrieval Expression correlation analysis | https://usegalaxy.eu | ||||
| 2024-09-19 | 2024-09-19 | MIT | Differential gene expression profiling Data retrieval Expression correlation analysis | https://usegalaxy.org | ||||
| 2024-09-19 | 2024-09-19 | MIT | Differential gene expression profiling Data retrieval Expression correlation analysis | https://usegalaxy.org.au | ||||
| 2023-11-02 | 2023-11-02 | MIT | Differential gene expression profiling Data retrieval Expression correlation analysis | https://usegalaxy.eu | ||||
| 2023-11-09 | 2023-11-09 | MIT | Differential gene expression profiling Data retrieval Expression correlation analysis | https://usegalaxy.org | ||||
| 2024-09-19 | 2024-09-19 | MIT | Differential gene expression profiling Data retrieval Expression correlation analysis | https://usegalaxy.org.au | ||||
| 2023-12-07 | 2023-12-07 | MIT | Differential gene expression profiling Data retrieval Expression correlation analysis | https://usegalaxy.eu | ||||
| 2023-12-07 | 2023-12-07 | MIT | Differential gene expression profiling Data retrieval Expression correlation analysis | https://usegalaxy.org | ||||
| 2024-09-19 | 2024-09-19 | MIT | Differential gene expression profiling Data retrieval Expression correlation analysis | https://usegalaxy.org.au | ||||
| 2024-03-07 | 2024-03-07 | MIT | Differential gene expression profiling Data retrieval Expression correlation analysis | https://usegalaxy.eu | ||||
| 2024-03-07 | 2024-03-07 | MIT | Differential gene expression profiling Data retrieval Expression correlation analysis | https://usegalaxy.org | ||||
| 2024-09-19 | 2024-09-19 | MIT | Differential gene expression profiling Data retrieval Expression correlation analysis | https://usegalaxy.org.au | ||||
| 2024-04-11 | 2024-04-11 | MIT | Differential gene expression profiling Data retrieval Expression correlation analysis | https://usegalaxy.eu | ||||
| 2024-04-11 | 2024-04-11 | MIT | Differential gene expression profiling Data retrieval Expression correlation analysis | https://usegalaxy.org | ||||
| 2024-09-19 | 2024-09-19 | MIT | Differential gene expression profiling Data retrieval Expression correlation analysis | https://usegalaxy.org.au | ||||
| 2024-09-19 | 2024-09-19 | MIT | Differential gene expression profiling Data retrieval Expression correlation analysis | https://usegalaxy.eu | ||||
| 2024-09-19 | 2024-09-19 | MIT | Differential gene expression profiling Data retrieval Expression correlation analysis | https://usegalaxy.org | ||||
| 2024-09-19 | 2024-09-19 | MIT | Differential gene expression profiling Data retrieval Expression correlation analysis | https://usegalaxy.org.au | ||||
| 2023-10-11 | 2023-10-19 | MIT | Differential gene expression profiling Data retrieval Expression correlation analysis | https://usegalaxy.org | ||||
| 2023-03-06 | 2023-05-21 | Statistical calculation Sequence composition calculation Enrichment analysis Primer removal Gene regulatory network analysis Sequence trimming Peak calling Read pre-processing Sequence alignment Sequencing quality control | ChIP ChIP-Seq ChIPSeq | https://usegalaxy.org | ||||
| 2012-06-22 | 2012-06-22 | https://usegalaxy.org | ||||||
| 2012-06-23 | 2012-06-28 | https://usegalaxy.org | ||||||
| 2023-11-23 | 2023-11-23 | Differential gene expression analysis Statistical calculation RNA-Seq analysis Transcriptome assembly Sequence composition calculation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2020-01-09 | 2020-01-09 | ml | https://usegalaxy.eu | |||||
| 2023-10-19 | 2023-12-29 | Statistical calculation Data handling RNA-Seq quantification Gene expression analysis Sequence composition calculation Primer removal Sequence annotation Sequence trimming RNA-Seq analysis Read pre-processing Sequencing quality control | https://usegalaxy.eu | |||||
| 2019-05-14 | 2020-05-19 | https://usegalaxy.eu | ||||||
| 2019-05-14 | 2020-05-19 | https://usegalaxy.eu | ||||||
| 2023-12-23 | 2023-12-23 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.eu | |||||
| 2023-10-18 | 2023-12-22 | Statistical calculation Data handling RNA-Seq quantification Gene expression analysis Sequence composition calculation Primer removal Sequence annotation Sequence trimming RNA-Seq analysis Read pre-processing Sequencing quality control | https://usegalaxy.eu | |||||
| 2015-11-18 | 2015-11-18 | https://usegalaxy.org | ||||||
| 2015-02-13 | 2016-01-07 | Sequence analysis Sequence alignment analysis Sequence alignment Local alignment Global alignment | maf fasta bed extract | https://usegalaxy.org | ||||
| 2023-11-09 | 2023-11-10 | https://usegalaxy.org | ||||||
| 2019-07-22 | 2019-07-22 | Visualisation Taxonomic classification | https://usegalaxy.eu | |||||
| 2022-07-13 | 2022-07-13 | Genome indexing Read mapping RNA-Seq analysis Transcriptome assembly Generation Sequence alignment | https://usegalaxy.eu | |||||
| 2022-07-13 | 2022-07-13 | Genome indexing Read mapping RNA-Seq analysis Transcriptome assembly Generation Sequence alignment | https://usegalaxy.org | |||||
| 2021-12-08 | 2022-03-22 | Genome indexing Generation Read mapping Sequence alignment | https://usegalaxy.org | |||||
| 2022-09-21 | 2022-09-22 | Pairwise sequence alignment Genome indexing Generation Read mapping Sequence alignment | https://usegalaxy.org | |||||
| 2022-09-21 | 2022-09-22 | Pairwise sequence alignment Genome indexing Generation Read mapping Sequence alignment | https://usegalaxy.org | |||||
| 2022-09-22 | 2022-09-23 | Pairwise sequence alignment Genome indexing Generation Read mapping Sequence alignment | https://usegalaxy.org | |||||
| 2022-09-21 | 2022-09-30 | Pairwise sequence alignment Genome indexing Generation Read mapping Sequence alignment | https://usegalaxy.org | |||||
| 2021-12-09 | 2022-09-30 | Pairwise sequence alignment Genome indexing Generation Read mapping Sequence alignment | https://usegalaxy.org | |||||
| 2021-12-08 | 2022-04-04 | Genome indexing Generation Read mapping Sequence alignment | https://usegalaxy.org | |||||
| 2021-12-08 | 2021-12-08 | RNA-Seq quantification Gene expression profiling Gene expression analysis Genome indexing Sequence composition calculation Read mapping RNA-Seq analysis Transcriptome assembly Generation Sequence alignment | https://usegalaxy.org | |||||
| 2021-12-08 | 2021-12-08 | RNA-Seq quantification Gene expression profiling Gene expression analysis Genome indexing Sequence composition calculation Read mapping RNA-Seq analysis Transcriptome assembly Generation Sequence alignment | https://usegalaxy.org | |||||
| 2022-03-28 | 2022-06-07 | Statistical calculation RNA-Seq analysis Transcriptome assembly RNA-Seq quantification Gene expression analysis Sequence composition calculation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2020-05-19 | 2020-05-19 | https://usegalaxy.eu | ||||||
| 2020-05-19 | 2020-05-19 | https://usegalaxy.eu | ||||||
| 2012-10-27 | 2015-01-26 | https://usegalaxy.org | ||||||
| 2024-04-12 | 2024-04-12 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2019-07-18 | 2019-07-31 | https://usegalaxy.eu | ||||||
| 2019-07-31 | 2019-07-31 | https://usegalaxy.eu | ||||||
| 2022-05-11 | 2022-05-11 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2018-03-28 | 2018-03-28 | https://usegalaxy.org.au | ||||||
| 2019-04-03 | 2019-04-05 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2020-05-14 | 2020-05-14 | Statistical calculation Sequence trimming Sequence composition calculation Read pre-processing Primer removal Sequencing quality control | https://usegalaxy.org.au | |||||
| 2020-05-14 | 2020-05-14 | Statistical calculation Sequence trimming Sequence composition calculation Read pre-processing Primer removal Sequencing quality control | https://usegalaxy.org.au | |||||
| 2023-05-04 | 2023-05-04 | Statistical calculation Formatting RNA-Seq quantification Sequence alignment Data handling Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2024-05-12 | 2024-05-20 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2024-03-31 | 2024-03-31 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2021-05-06 | 2021-05-06 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org | |||||
| 2021-05-06 | 2021-05-06 | https://usegalaxy.org | ||||||
| 2024-04-08 | 2024-04-08 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2021-05-04 | 2021-05-05 | https://usegalaxy.org | ||||||
| 2023-05-03 | 2023-05-03 | Statistical calculation Formatting RNA-Seq quantification Sequence alignment Data handling Gene functional annotation Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2024-03-27 | 2024-03-27 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2020-05-14 | 2020-05-14 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2018-03-28 | 2018-03-28 | https://usegalaxy.org.au | ||||||
| 2020-05-08 | 2020-05-14 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2023-05-04 | 2023-05-04 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2022-05-03 | 2023-05-02 | Statistical calculation RNA-Seq quantification Sequence composition calculation Primer removal Differential gene expression analysis Sequence trimming Read summarisation RNA-Seq analysis Read pre-processing Sequence alignment Sequencing quality control | https://usegalaxy.org.au | |||||
| 2021-05-02 | 2021-09-08 | Variant calling Statistical calculation Genome indexing Generation Read mapping Sequence alignment | https://usegalaxy.org.au | |||||
| 2021-03-10 | 2021-03-10 | Statistical calculation Formatting Genome indexing Sequence composition calculation Read mapping Validation Sequence contamination filtering Generation Sequence alignment Sequencing quality control | https://usegalaxy.org.au | |||||
| 2020-05-14 | 2020-05-15 | https://usegalaxy.org.au | ||||||
| 2023-11-09 | 2023-11-09 | CC-BY-4.0 | Biodiversity Ecology | WorkflowHub | ||||
| 2023-11-09 | 2023-11-09 | https://usegalaxy.eu | ||||||
| 2024-04-07 | 2024-04-07 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2015-02-03 | 2015-02-09 | Sequence composition calculation Statistical calculation Sequencing quality control | rnaseq | https://usegalaxy.org | ||||
| 2019-04-04 | 2019-04-04 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2023-01-24 | 2023-01-24 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2023-01-03 | 2023-01-06 | Variant calling Statistical calculation Formatting Sequence composition calculation Mapping Read mapping Sequencing quality control | https://usegalaxy.org | |||||
| 2023-01-23 | 2023-01-24 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2023-01-09 | 2023-01-09 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2022-01-12 | 2022-01-12 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2021-12-22 | 2021-12-22 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2018-03-31 | 2018-03-31 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2022-05-27 | 2022-05-28 | Genome assembly De-novo assembly Coding region prediction Genome annotation Cross-assembly Mapping assembly Gene prediction Filtering Sequencing quality control | https://usegalaxy.org | |||||
| 2024-01-24 | 2024-01-24 | Statistical calculation Genome visualisation Genome indexing Sequence composition calculation Read mapping Primer removal Sequence trimming Generation Read pre-processing Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2024-01-24 | 2024-01-24 | Statistical calculation Genome visualisation Formatting Genome indexing Sequence composition calculation Read mapping Primer removal SNP detection Sequence trimming Generation Read pre-processing Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2020-10-12 | 2021-11-29 | Statistical calculation Taxonomic classification Genome assembly Sequence composition calculation Multilocus sequence typing Coding region prediction Genome annotation Visualisation Antimicrobial resistance prediction Gene prediction Sequence assembly visualisation Sequence assembly validation Sequencing quality control | https://usegalaxy.org | |||||
| 2022-05-03 | 2023-02-13 | CC-BY-4.0 | Statistical calculation Data handling RNA-Seq quantification Sequence composition calculation Read mapping Differential gene expression analysis RNA-Seq analysis Read summarisation Sequencing quality control | WorkflowHub | ||||
| 2022-05-03 | 2022-05-03 | Statistical calculation Data handling RNA-Seq quantification Sequence composition calculation Read mapping Differential gene expression analysis RNA-Seq analysis Read summarisation Sequencing quality control | https://usegalaxy.org | |||||
| 2020-06-23 | 2020-06-24 | proteomics proteore | https://usegalaxy.fr | |||||
| 2021-09-24 | 2023-01-16 | Apache-2.0 | Biomedical Ontologies Gene Prioritization Pathway Analysis Semantic Interpretation Semantic Network Analysis | WorkflowHub | ||||
| 2021-07-22 | 2021-08-09 | MIT | Visualisation Image annotation Data handling Image analysis | bladder_MSI MS_imaging shared | https://usegalaxy.eu | |||
| 2021-07-22 | 2021-08-09 | MIT | bladder_MSI MS_imaging shared | https://usegalaxy.eu | ||||
| 2021-07-27 | 2021-08-09 | MIT | bladder_MSI MS_imaging shared | https://usegalaxy.eu | ||||
| 2021-08-02 | 2021-08-09 | MIT | bladder_MSI MS_imaging shared | https://usegalaxy.eu | ||||
| 2021-06-22 | 2021-08-09 | MIT | bladder_MSI MS_imaging shared | https://usegalaxy.eu | ||||
| 2021-08-09 | 2021-08-09 | MIT | bladder_MSI MS_imaging shared | https://usegalaxy.eu | ||||
| 2023-11-15 | 2024-02-02 | Phylogenetic tree generation (maximum likelihood and Bayesian methods) Phylogenetic tree reconstruction Phylogenetic tree generation Phylogenetic tree generation (from molecular sequences) Sequence motif recognition Phylogenetic tree analysis Sequence clustering Multiple sequence alignment Sequence cluster visualisation Sequence visualisation | https://usegalaxy.eu | |||||
| 2021-04-24 | 2021-04-24 | https://usegalaxy.eu | ||||||
| 2023-09-08 | 2024-03-09 | https://usegalaxy.eu | ||||||
| 2024-10-11 | 2024-10-17 | CC-BY-SA-4.0 | Pairwise sequence alignment Transcriptome assembly Sequence alignment analysis Genome assembly Sequence assembly validation Scaffolding | Assembly HiFi Blobtools QC | https://usegalaxy.org.au | |||
| 2018-11-19 | 2018-11-27 | https://usegalaxy.eu | ||||||
| 2021-03-19 | 2021-03-19 | transcriptomics galaxy-training-network | https://usegalaxy.org.au | |||||
| 2018-11-30 | 2018-12-10 | Nucleic acid feature detection | https://usegalaxy.eu | |||||
| 2018-02-19 | 2018-08-13 | https://usegalaxy.eu | ||||||
| 2015-02-12 | 2015-06-26 | https://usegalaxy.eu | ||||||
| 2015-02-12 | 2015-06-26 | Nucleic acid feature detection | https://usegalaxy.eu | |||||
| 2020-11-04 | 2020-11-10 | Sequence analysis Sequence alignment analysis Sequence alignment Local alignment Global alignment | https://usegalaxy.org | |||||
| 2024-04-02 | 2024-04-02 | Validation Sequence contamination filtering Data handling Genome indexing Generation Read mapping Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2021-12-30 | 2021-12-30 | Peak detection Mass spectrum visualisation Chromatogram visualisation Validation Chromatographic alignment Filtering Label-free quantification | https://usegalaxy.fr | |||||
| 2023-11-10 | 2023-11-10 | CC-BY-4.0 | Biodiversity Ecology | WorkflowHub | ||||
| 2023-05-24 | 2023-11-10 | https://usegalaxy.eu | ||||||
| 2020-03-29 | 2020-03-29 | https://usegalaxy.org | ||||||
| 2024-09-19 | 2024-09-19 | GPL-3.0-or-later | RNA-Seq analysis Transcriptome assembly Genome annotation | https://usegalaxy.eu | ||||
| 2024-09-19 | 2024-09-19 | GPL-3.0-or-later | RNA-Seq analysis Transcriptome assembly Genome annotation | https://usegalaxy.org | ||||
| 2024-10-17 | 2024-10-17 | GPL-3.0-or-later | RNA-Seq analysis Transcriptome assembly Genome annotation | https://usegalaxy.eu | ||||
| 2024-10-17 | 2024-10-17 | GPL-3.0-or-later | RNA-Seq analysis Transcriptome assembly Genome annotation | https://usegalaxy.org | ||||
| 2024-10-10 | 2024-10-10 | GPL-3.0-or-later | RNA-Seq analysis Transcriptome assembly Genome annotation | WorkflowHub | ||||
| 2019-01-03 | 2019-04-11 | massspectrometryimaging | https://usegalaxy.eu | |||||
| 2019-01-30 | 2019-04-11 | massspectrometryimaging | https://usegalaxy.eu | |||||
| 2023-07-06 | 2023-07-06 | https://usegalaxy.org | ||||||
| 2024-07-19 | 2024-07-19 | MIT | Variant calling Analysis Visualisation Deposition DNA barcoding | microbiome | https://usegalaxy.org | |||
| 2019-04-28 | 2019-04-28 | https://usegalaxy.org | ||||||
| 2020-03-04 | 2020-03-06 | Statistical calculation Read summarisation RNA-Seq quantification Sequence composition calculation Sequence alignment Nucleic acid sequence analysis Sequencing quality control | https://usegalaxy.org | |||||
| 2022-11-23 | 2022-12-08 | Validation Sequence trimming Read pre-processing Sequence alignment Primer removal Sequencing quality control | https://usegalaxy.eu | |||||
| 2012-01-31 | 2012-01-31 | https://usegalaxy.org | ||||||
| 2024-02-25 | 2024-05-08 | Statistical calculation Data handling Sequence composition calculation Primer removal Sequence contamination filtering Sequence trimming Read pre-processing Sequence alignment Nucleic acid sequence analysis Sequencing quality control | https://usegalaxy.eu | |||||
| 2024-04-11 | 2024-05-08 | Sequence contamination filtering Statistical calculation Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2021-12-22 | 2021-12-22 | Peak detection Mass spectrum visualisation Chromatogram visualisation Validation Chromatographic alignment Filtering Label-free quantification | https://usegalaxy.fr | |||||
| 2024-02-15 | 2024-02-15 | CC-BY-SA-4.0 | Ecology | WorkflowHub | ||||
| 2021-01-15 | 2021-01-15 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.eu | |||||
| 2013-10-22 | 2015-03-06 | Variant calling Statistical calculation Sequence composition calculation Sequencing quality control | https://usegalaxy.org | |||||
| 2017-05-30 | 2017-05-31 | https://usegalaxy.org | ||||||
| 2023-12-14 | 2023-12-14 | Statistical calculation Formatting Data handling Sequence alignment analysis Genome indexing Sequence composition calculation Read mapping Variant calling Generation Sequence alignment Sequencing quality control | variant-analysis name:microGalaxy | https://usegalaxy.eu | ||||
| 2021-03-19 | 2021-03-19 | Statistical calculation Formatting Data handling Sequence alignment analysis Genome indexing Sequence composition calculation Read mapping Variant calling Generation Sequence alignment Sequencing quality control | variant-analysis galaxy-training-network | https://usegalaxy.org.au | ||||
| 2020-04-17 | 2020-08-31 | Statistical calculation Formatting Data handling Sequence alignment analysis Genome indexing Sequence composition calculation Read mapping Variant calling Generation Sequence alignment Sequencing quality control | variant-analysis galaxy-training-network | https://usegalaxy.org.au | ||||
| 2020-02-03 | 2020-02-28 | Statistical calculation Taxonomic classification Sequence composition calculation Sequencing quality control | https://usegalaxy.org | |||||
| 2016-06-05 | 2016-06-05 | Statistical calculation Formatting Genome indexing Sequence composition calculation Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2023-10-10 | 2023-10-27 | MIT | Biomedical science Genetic variation Oncology | SNP annotation | EOSC4Cancer | WorkflowHub | ||
| 2023-10-10 | 2023-10-10 | MIT | SNP annotation | EOSC4Cancer | https://usegalaxy.eu | |||
| 2023-10-27 | 2023-10-27 | GPL-3.0 | Biomedical science Genetic variation Oncology | SNP annotation | EOSC4Cancer | WorkflowHub | ||
| 2023-10-26 | 2023-10-27 | GPL-3.0-or-later | SNP annotation | EOSC4Cancer | https://usegalaxy.eu | |||
| 2018-01-25 | 2018-02-02 | Variant calling Statistical calculation Read mapping | https://usegalaxy.org | |||||
| 2024-07-28 | 2024-08-02 | AGPL-3.0-or-later | De-novo assembly Genome alignment Genome indexing Read mapping Validation Sequence contamination filtering Data retrieval Generation Filtering Sequence alignment Sequencing quality control | CaPV VETLAB virology | https://usegalaxy.eu | |||
| 2019-08-22 | 2019-08-22 | Statistical calculation Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Validation Differential gene expression analysis RNA-Seq analysis Read summarisation Sequencing quality control | https://usegalaxy.org | |||||
| 2017-06-13 | 2017-10-06 | Statistical calculation Formatting Genome indexing Sequence composition calculation Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2021-07-27 | 2022-04-25 | Image analysis | mito-flash mitochondrion_tracking | https://usegalaxy.eu | ||||
| 2023-11-08 | 2023-11-08 | Sequence contamination filtering Statistical calculation Visualisation Taxonomic classification Scatter plot plotting Box-Whisker plot plotting Sequence composition calculation Sequencing quality control | https://usegalaxy.org | |||||
| 2016-05-25 | 2016-05-25 | https://usegalaxy.org | ||||||
| 2016-05-25 | 2016-05-25 | https://usegalaxy.org | ||||||
| 2024-03-14 | 2024-03-14 | https://usegalaxy.org | ||||||
| 2022-11-07 | 2022-11-10 | Differential gene expression analysis | single-cell 10x transcriptomics name:single-cell | https://usegalaxy.eu | ||||
| 2021-03-19 | 2021-03-19 | transcriptomics galaxy-training-network | https://usegalaxy.org.au | |||||
| 2018-08-17 | 2018-12-05 | Read summarisation Data handling Sequence alignment analysis RNA-Seq quantification Sequence alignment Sequencing quality control | https://usegalaxy.eu | |||||
| 2020-04-15 | 2020-04-22 | Read summarisation Data handling Sequence alignment analysis RNA-Seq quantification Sequence alignment Sequencing quality control | transcriptomics galaxy-training-network | https://usegalaxy.org.au | ||||
| 2019-01-17 | 2019-09-04 | Validation Read summarisation Data handling Sequence alignment analysis RNA-Seq quantification Sequence alignment Sequencing quality control | https://usegalaxy.eu | |||||
| 2018-03-06 | 2018-03-17 | Sequencing quality control | https://usegalaxy.eu | |||||
| 2018-02-28 | 2018-03-23 | Validation Statistical calculation Sequence trimming Sequence composition calculation Read pre-processing Primer removal Sequencing quality control | https://usegalaxy.eu | |||||
| 2018-02-28 | 2018-03-21 | Validation Read summarisation RNA-Seq quantification Sequence alignment Sequencing quality control | https://usegalaxy.eu | |||||
| 2020-02-12 | 2020-03-06 | moleculardynamics | https://usegalaxy.eu | |||||
| 2015-05-13 | 2015-05-31 | Statistical calculation Peak calling Formatting Sequence composition calculation Read mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | https://usegalaxy.eu | |||||
| 2024-01-29 | 2024-01-29 | GPL-3.0-or-later | Expression analysis Statistical calculation Taxonomic classification Cross-assembly | ecology | https://usegalaxy.fr | |||
| 2020-04-10 | 2023-01-16 | MIT | covid-19 | WorkflowHub | ||||
| 2020-04-10 | 2023-01-16 | MIT | covid-19 | WorkflowHub | ||||
| 2020-04-10 | 2023-01-16 | MIT | covid-19 | WorkflowHub | ||||
| 2020-04-10 | 2023-01-16 | MIT | covid-19 | WorkflowHub | ||||
| 2020-04-10 | 2023-01-16 | MIT | covid-19 | WorkflowHub | ||||
| 2020-04-10 | 2023-01-16 | MIT | covid-19 | WorkflowHub | ||||
| 2020-04-10 | 2023-01-16 | MIT | covid-19 | WorkflowHub | ||||
| 2019-12-19 | 2019-12-20 | cheminformatics | https://usegalaxy.eu | |||||
| 2020-01-08 | 2020-01-09 | cheminformatics ml | https://usegalaxy.eu | |||||
| 2019-04-03 | 2019-04-04 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2023-03-23 | 2023-03-23 | MIT | Formatting Visualisation | Hi-C | https://usegalaxy.eu | |||
| 2023-02-23 | 2023-02-23 | MIT | Formatting Visualisation | Hi-C | https://usegalaxy.org | |||
| 2023-09-07 | 2023-09-07 | MIT | Formatting Visualisation | Hi-C | https://usegalaxy.eu | |||
| 2023-09-07 | 2023-09-07 | MIT | Formatting Visualisation | Hi-C | https://usegalaxy.org | |||
| 2023-09-07 | 2023-09-07 | MIT | Formatting Visualisation | Hi-C | https://usegalaxy.eu | |||
| 2023-09-07 | 2023-09-07 | MIT | Formatting Visualisation | Hi-C | https://usegalaxy.org | |||
| 2024-09-19 | 2024-09-19 | MIT | Formatting Visualisation | Hi-C | https://usegalaxy.eu | |||
| 2024-04-11 | 2024-04-11 | MIT | Formatting Visualisation | Hi-C | https://usegalaxy.org | |||
| 2023-05-19 | 2023-05-19 | Read mapping | https://usegalaxy.eu | |||||
| 2013-06-01 | 2015-04-28 | ChIP Mouse MACS Illumina | https://usegalaxy.org | |||||
| 2018-08-13 | 2018-08-16 | Statistical calculation Peak calling Sequence composition calculation Read mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | https://usegalaxy.org | |||||
| 2012-12-19 | 2012-12-19 | https://usegalaxy.org | ||||||
| 2014-11-04 | 2014-12-01 | https://usegalaxy.org | ||||||
| 2018-08-15 | 2018-08-16 | Statistical calculation Peak calling Sequence composition calculation Read mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | https://usegalaxy.org | |||||
| 2016-11-18 | 2016-11-18 | https://usegalaxy.org | ||||||
| 2014-11-24 | 2014-11-25 | https://usegalaxy.org | ||||||
| 2024-10-07 | 2024-10-07 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | WorkflowHub | |||
| 2024-10-07 | 2024-10-07 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | WorkflowHub | |||
| 2024-09-19 | 2024-09-19 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-09-12 | 2024-09-12 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-09-05 | 2024-09-05 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-08-29 | 2024-08-29 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-08-22 | 2024-08-22 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-08-15 | 2024-08-15 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-08-08 | 2024-08-08 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-08-01 | 2024-08-01 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-07-25 | 2024-07-25 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-07-18 | 2024-07-18 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-07-11 | 2024-07-11 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-07-04 | 2024-07-04 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-06-27 | 2024-06-27 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-06-20 | 2024-06-20 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-06-13 | 2024-06-13 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-06-06 | 2024-06-06 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-09-19 | 2024-09-19 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org.au | |||
| 2024-09-19 | 2024-09-19 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-09-12 | 2024-09-12 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-09-05 | 2024-09-05 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-08-29 | 2024-08-29 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-08-22 | 2024-08-22 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-08-15 | 2024-08-15 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-08-08 | 2024-08-08 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-08-01 | 2024-08-01 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-07-25 | 2024-07-25 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-07-18 | 2024-07-18 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-09-26 | 2024-09-26 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.eu | |||
| 2024-09-26 | 2024-09-26 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-09-26 | 2024-09-26 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org.au | |||
| 2022-12-01 | 2022-12-01 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.eu | |||
| 2022-12-01 | 2022-12-01 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2022-12-01 | 2022-12-01 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org.au | |||
| 2023-01-19 | 2023-01-19 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.eu | |||
| 2023-01-19 | 2023-01-19 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2023-01-19 | 2023-01-19 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org.au | |||
| 2023-08-31 | 2023-08-31 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.eu | |||
| 2023-09-07 | 2023-09-07 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2023-09-07 | 2023-09-07 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org.au | |||
| 2023-08-31 | 2023-08-31 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org.au | |||
| 2023-11-02 | 2023-11-02 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.eu | |||
| 2023-11-09 | 2023-11-09 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2023-11-13 | 2023-11-13 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org.au | |||
| 2024-03-21 | 2024-03-21 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.eu | |||
| 2024-03-21 | 2024-03-21 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org.au | |||
| 2024-03-21 | 2024-03-21 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.eu | |||
| 2024-03-21 | 2024-03-21 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org.au | |||
| 2024-03-28 | 2024-03-28 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.eu | |||
| 2024-04-11 | 2024-04-11 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-09-12 | 2024-09-12 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-09-05 | 2024-09-05 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-08-29 | 2024-08-29 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-08-22 | 2024-08-22 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-08-15 | 2024-08-15 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-08-08 | 2024-08-08 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-08-01 | 2024-08-01 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-07-25 | 2024-07-25 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-07-18 | 2024-07-18 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-07-11 | 2024-07-11 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-07-04 | 2024-07-04 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-06-27 | 2024-06-27 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-06-20 | 2024-06-20 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-06-13 | 2024-06-13 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-06-06 | 2024-06-06 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-05-30 | 2024-05-30 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-05-23 | 2024-05-23 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-05-16 | 2024-05-16 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-05-09 | 2024-05-09 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-05-02 | 2024-05-02 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-04-25 | 2024-04-25 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-09-19 | 2024-09-19 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-09-12 | 2024-09-12 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-09-05 | 2024-09-05 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-08-29 | 2024-08-29 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-08-22 | 2024-08-22 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-08-15 | 2024-08-15 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-08-08 | 2024-08-08 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-08-01 | 2024-08-01 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-07-25 | 2024-07-25 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-07-18 | 2024-07-18 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-07-11 | 2024-07-11 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-07-04 | 2024-07-04 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-06-27 | 2024-06-27 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-06-20 | 2024-06-20 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-06-13 | 2024-06-13 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-06-06 | 2024-06-06 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-05-30 | 2024-05-30 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-05-23 | 2024-05-23 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-05-16 | 2024-05-16 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-05-09 | 2024-05-09 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-05-02 | 2024-05-02 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-09-19 | 2024-09-19 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org.au | |||
| 2022-10-15 | 2023-12-06 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | WorkflowHub | |||
| 2022-10-27 | 2022-10-27 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.eu | |||
| 2022-10-27 | 2022-10-27 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2022-10-27 | 2022-10-27 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org.au | |||
| 2024-09-19 | 2024-09-19 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-09-12 | 2024-09-12 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-09-05 | 2024-09-05 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-08-29 | 2024-08-29 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-08-22 | 2024-08-22 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-08-15 | 2024-08-15 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-08-08 | 2024-08-08 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-08-01 | 2024-08-01 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-07-25 | 2024-07-25 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-07-18 | 2024-07-18 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-07-11 | 2024-07-11 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-07-04 | 2024-07-04 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-06-27 | 2024-06-27 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-06-20 | 2024-06-20 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-06-13 | 2024-06-13 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-06-06 | 2024-06-06 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-09-19 | 2024-09-19 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org.au | |||
| 2024-09-19 | 2024-09-19 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-09-12 | 2024-09-12 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-09-05 | 2024-09-05 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-08-29 | 2024-08-29 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-08-22 | 2024-08-22 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-08-15 | 2024-08-15 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-08-08 | 2024-08-08 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-08-01 | 2024-08-01 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-07-25 | 2024-07-25 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-07-18 | 2024-07-18 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-09-26 | 2024-09-26 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.eu | |||
| 2024-09-26 | 2024-09-26 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-09-26 | 2024-09-26 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org.au | |||
| 2022-12-01 | 2022-12-01 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.eu | |||
| 2022-12-01 | 2022-12-01 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2022-12-01 | 2022-12-01 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org.au | |||
| 2023-01-19 | 2023-01-19 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.eu | |||
| 2023-01-19 | 2023-01-19 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2023-01-19 | 2023-01-19 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org.au | |||
| 2023-08-31 | 2023-08-31 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.eu | |||
| 2023-09-07 | 2023-09-07 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2023-09-07 | 2023-09-07 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org.au | |||
| 2023-08-31 | 2023-08-31 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org.au | |||
| 2023-11-02 | 2023-11-02 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.eu | |||
| 2023-11-09 | 2023-11-09 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2023-11-13 | 2023-11-13 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org.au | |||
| 2024-03-21 | 2024-03-21 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.eu | |||
| 2024-03-21 | 2024-03-21 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org.au | |||
| 2024-03-28 | 2024-03-28 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.eu | |||
| 2024-04-11 | 2024-04-11 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-09-12 | 2024-09-12 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-09-05 | 2024-09-05 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-08-29 | 2024-08-29 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-08-22 | 2024-08-22 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-08-15 | 2024-08-15 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-08-08 | 2024-08-08 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-08-01 | 2024-08-01 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-07-25 | 2024-07-25 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-07-18 | 2024-07-18 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-07-11 | 2024-07-11 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-07-04 | 2024-07-04 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-06-27 | 2024-06-27 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-06-20 | 2024-06-20 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-06-13 | 2024-06-13 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-06-06 | 2024-06-06 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-05-30 | 2024-05-30 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-05-23 | 2024-05-23 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-05-16 | 2024-05-16 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-05-09 | 2024-05-09 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-05-02 | 2024-05-02 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-04-25 | 2024-04-25 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-09-19 | 2024-09-19 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-09-12 | 2024-09-12 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-09-05 | 2024-09-05 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-08-29 | 2024-08-29 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-08-22 | 2024-08-22 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-08-15 | 2024-08-15 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-08-08 | 2024-08-08 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-08-01 | 2024-08-01 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-07-25 | 2024-07-25 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-07-18 | 2024-07-18 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-07-11 | 2024-07-11 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-07-04 | 2024-07-04 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-06-27 | 2024-06-27 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-06-20 | 2024-06-20 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-06-13 | 2024-06-13 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-06-06 | 2024-06-06 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-05-30 | 2024-05-30 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-05-23 | 2024-05-23 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-05-16 | 2024-05-16 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-05-09 | 2024-05-09 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-05-02 | 2024-05-02 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-09-19 | 2024-09-19 | MIT | Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | ChIP | https://usegalaxy.org.au | |||
| 2017-08-29 | 2017-08-29 | Genome indexing Generation Read mapping Sequence alignment | ChIPseq Tutorial | https://usegalaxy.org | ||||
| 2015-06-19 | 2019-05-03 | Statistical calculation Sequence composition calculation Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Sequence trimming Peak calling Read pre-processing Sequencing quality control | https://usegalaxy.org | |||||
| 2020-12-09 | 2021-04-15 | Genome visualisation Genome assembly De-novo assembly Genome indexing Read mapping Coding region prediction Analysis Genome annotation Gene prediction Generation Box-Whisker plot plotting Cross-assembly Mapping assembly Read alignment Sequence assembly Sequence assembly visualisation Sequence alignment Scatter plot plotting | assembly | https://usegalaxy.org.au | ||||
| 2021-03-19 | 2021-03-19 | Genome visualisation Genome assembly De-novo assembly Genome indexing Read mapping Coding region prediction Analysis Genome annotation Gene prediction Generation Box-Whisker plot plotting Cross-assembly Mapping assembly Read alignment Sequence assembly Sequence assembly visualisation Sequence alignment Scatter plot plotting | assembly galaxy-training-network | https://usegalaxy.org.au | ||||
| 2024-03-12 | 2024-03-12 | Validation Sequence contamination filtering Taxonomic classification Sequencing quality control | https://usegalaxy.eu | |||||
| 2010-10-15 | 2010-10-15 | https://usegalaxy.org | ||||||
| 2024-06-11 | 2024-06-11 | Data handling Sequence alignment | circRNA annotation | https://usegalaxy.org.au | ||||
| 2020-04-09 | 2020-04-09 | ml statistics galaxy-training-network | https://usegalaxy.org.au | |||||
| 2020-05-23 | 2020-05-23 | statistics classification ml cheminformatics | https://usegalaxy.eu | |||||
| 2023-04-08 | 2023-04-09 | Statistical calculation Sequence composition calculation Read mapping Primer removal Read binning Sequence contamination filtering Sequence trimming RNA-Seq analysis Read pre-processing Sequence alignment Sequencing quality control | https://usegalaxy.org.au | |||||
| 2011-10-04 | 2015-10-08 | https://usegalaxy.org | ||||||
| 2020-06-29 | 2023-01-16 | MIT | Climate GTN | WorkflowHub | ||||
| 2022-06-08 | 2022-06-09 | Statistical calculation Generation Genome indexing Sequence composition calculation Mapping Read mapping Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2024-10-03 | 2024-10-03 | CC-BY-4.0 | Statistical calculation Heat map generation Standardisation and normalisation Protein quantification Visualisation Imputation Clustering Principal component plotting | name:clinicalMP | https://usegalaxy.eu | |||
| 2024-10-03 | 2024-10-03 | CC-BY-4.0 | Statistical calculation Heat map generation Standardisation and normalisation Protein quantification Visualisation Imputation Clustering Principal component plotting | name:clinicalMP | https://usegalaxy.org | |||
| 2024-10-03 | 2024-10-03 | CC-BY-4.0 | Statistical calculation Heat map generation Standardisation and normalisation Protein quantification Visualisation Imputation Clustering Principal component plotting | name:clinicalMP | https://usegalaxy.org.au | |||
| 2023-07-13 | 2023-09-07 | Target-Decoy de Novo sequencing Tag-based peptide identification Expression analysis Protein identification | https://usegalaxy.eu | |||||
| 2023-06-20 | 2023-06-20 | https://usegalaxy.eu | ||||||
| 2024-10-07 | 2024-10-07 | CC-BY-4.0 | Statistical calculation Heat map generation Standardisation and normalisation Protein quantification Visualisation Imputation Clustering Principal component plotting | WorkflowHub | ||||
| 2019-01-17 | 2019-01-17 | Statistical calculation Sequence composition calculation Mapping Primer removal Sequence trimming Read pre-processing Sequence alignment Sequencing quality control | RNA eCLIP CLIP-seq | https://usegalaxy.eu | ||||
| 2022-09-12 | 2022-09-26 | Statistical calculation Formatting Data handling Genome indexing Sequence composition calculation Read mapping Primer removal Variant calling Sequence contamination filtering Sequence trimming Validation Differential gene expression analysis RNA-Seq analysis Generation Read pre-processing Sequence alignment Nucleic acid sequence analysis Sequencing quality control | https://usegalaxy.eu | |||||
| 2020-10-27 | 2021-06-15 | Visualisation | climate fates | https://usegalaxy.eu | ||||
| 2020-10-27 | 2023-01-16 | Apache-2.0 | WorkflowHub | |||||
| 2011-05-11 | 2011-07-26 | https://usegalaxy.org | ||||||
| 2011-05-11 | 2011-07-26 | https://usegalaxy.org | ||||||
| 2011-04-08 | 2011-05-05 | Sequence analysis Sequence alignment analysis Sequence alignment Local alignment Global alignment | https://usegalaxy.org | |||||
| 2011-11-16 | 2011-11-16 | https://usegalaxy.org | ||||||
| 2022-06-29 | 2023-12-07 | Expression analysis Read mapping Taxonomic classification Cross-assembly | metagenomics metatranscriptomics name:microGalaxy | https://usegalaxy.eu | ||||
| 2022-09-26 | 2022-10-03 | Visualisation | cloud_computing_workshop proteomics | https://usegalaxy.eu | ||||
| 2021-11-01 | 2023-12-07 | Validation Statistical calculation Sequence composition calculation Sequencing quality control | metagenomics metatranscriptomics name:microGalaxy | https://usegalaxy.eu | ||||
| 2021-11-01 | 2023-12-07 | Statistical calculation Fold recognition Sequence alignment analysis Information extraction Query and retrieval Read mapping Genome annotation Sequence clustering Sequence assembly validation Sequencing quality control Gene functional annotation Genome assembly Sequence composition calculation Mapping Sequence annotation Homology-based gene prediction Validation Sequence analysis Visualisation | metagenomics metatranscriptomics name:microGalaxy | https://usegalaxy.eu | ||||
| 2022-09-03 | 2023-12-07 | Statistical calculation Visualisation Taxonomic classification Cross-assembly Expression analysis Filtering Standardisation and normalisation | metagenomics metatranscriptomics name:microGalaxy | https://usegalaxy.eu | ||||
| 2014-06-16 | 2015-05-28 | https://usegalaxy.org | ||||||
| 2012-11-20 | 2012-12-03 | https://usegalaxy.org | ||||||
| 2012-11-28 | 2012-11-28 | https://usegalaxy.org | ||||||
| 2013-06-27 | 2013-12-21 | https://usegalaxy.org | ||||||
| 2024-10-07 | 2024-10-08 | https://usegalaxy.eu | ||||||
| 2024-10-07 | 2024-10-08 | https://usegalaxy.eu | ||||||
| 2024-10-01 | 2024-10-04 | CC-BY-4.0 | Differential gene expression analysis | name:scRNA-seq name:single-cell | https://usegalaxy.eu | |||
| 2020-04-15 | 2020-04-22 | Differential gene expression analysis | transcriptomics galaxy-training-network | https://usegalaxy.org.au | ||||
| 2024-10-08 | 2024-10-08 | https://usegalaxy.eu | ||||||
| 2020-08-31 | 2020-08-31 | Visualisation | statistics clustering ml galaxy-training-network | https://usegalaxy.org.au | ||||
| 2020-05-23 | 2020-05-23 | Visualisation | statistics clustering ml | https://usegalaxy.eu | ||||
| 2021-12-10 | 2021-12-14 | https://usegalaxy.eu | ||||||
| 2019-04-11 | 2020-06-22 | Visualisation Image annotation Data handling Image analysis | massspectrometryimaging | https://usegalaxy.eu | ||||
| 2014-10-26 | 2014-10-26 | https://usegalaxy.org | ||||||
| 2021-05-28 | 2022-03-11 | Sequence composition calculation Statistical calculation Data handling Sequencing quality control | https://usegalaxy.eu | |||||
| 2021-10-18 | 2023-05-30 | MIT | Genome indexing Read mapping Validation Sequence contamination filtering SNP detection Generation Sequence alignment Sequencing quality control | COVID-19 ARTIC covid19.galaxyproject.org testingmaximus name:v2.1.0+galaxy3 | https://usegalaxy.org | |||
| 2023-07-04 | 2023-07-04 | Sequence contamination filtering Taxonomic classification Sequencing quality control | https://usegalaxy.eu | |||||
| 2017-09-12 | 2017-09-18 | Differential gene expression analysis Statistical calculation RNA-Seq analysis Sequence composition calculation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2024-05-08 | 2024-05-09 | GPL-3.0 | Mapping Transcriptome assembly RNA-Seq analysis | TSI-annotation | WorkflowHub | |||
| 2021-11-08 | 2023-01-16 | Apache-2.0 | Large-genome-assembly | WorkflowHub | ||||
| 2021-07-26 | 2021-11-09 | LG-WF | https://usegalaxy.org.au | |||||
| 2020-12-08 | 2020-12-08 | Genome visualisation Genome assembly De-novo assembly Genome indexing Read mapping Analysis Generation Box-Whisker plot plotting Cross-assembly Mapping assembly Read alignment Sequence assembly Sequence assembly visualisation Sequence alignment Scatter plot plotting | assembly | https://usegalaxy.org.au | ||||
| 2024-03-23 | 2024-03-26 | CC-BY-4.0 | name:training name:single-cell | https://usegalaxy.eu | ||||
| 2021-12-20 | 2022-01-13 | https://usegalaxy.eu | ||||||
| 2023-12-14 | 2023-12-14 | Multiple sequence alignment Sequence alignment analysis Phylogenetic tree generation | vgp genome-annotation name:microGalaxy | https://usegalaxy.eu | ||||
| 2011-04-21 | 2011-04-21 | biostar | https://usegalaxy.org | |||||
| 2012-05-21 | 2012-05-22 | https://usegalaxy.org | ||||||
| 2020-12-05 | 2020-12-13 | https://usegalaxy.eu | ||||||
| 2019-10-19 | 2022-01-13 | name:EBVuseable name:EBVready name:EBVderivedmodelled | https://usegalaxy.eu | |||||
| 2019-06-21 | 2019-06-26 | Formatting Taxonomic classification Sequence alignment analysis Phylogenetic inference Sequence comparison Primer removal Phylogenetic tree visualisation Sequence trimming Visualisation Conversion Read pre-processing Sequence similarity search Phylogenetic tree editing | GCC2019 | https://usegalaxy.eu | ||||
| 2019-12-19 | 2019-12-20 | cheminformatics | https://usegalaxy.eu | |||||
| 2023-12-13 | 2023-12-13 | Variant calling Statistical calculation Read mapping | name:microGalaxy HPylori | https://usegalaxy.eu | ||||
| 2021-02-24 | 2021-02-24 | Ecology | https://usegalaxy.eu | |||||
| 2021-05-23 | 2023-01-16 | GPL-3.0 | Climate eosc-nordic observation | WorkflowHub | ||||
| 2024-04-18 | 2024-04-18 | Mapping | BMMB582 | https://usegalaxy.org | ||||
| 2023-08-23 | 2023-08-28 | Read mapping Sequence clustering Read binning | https://usegalaxy.eu | |||||
| 2021-03-10 | 2021-03-10 | wfdemo | https://usegalaxy.eu | |||||
| 2021-03-10 | 2021-03-10 | WFdemo | https://usegalaxy.eu | |||||
| 2024-10-07 | 2024-10-07 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | WorkflowHub | |||
| 2024-08-27 | 2024-09-02 | Phasing k-mer counting Genome assembly De-novo assembly Scaffolding Visualisation Transcriptome assembly Sequence assembly validation | https://usegalaxy.org.au | |||||
| 2024-05-08 | 2024-05-09 | GPL-3.0 | Sequence file editing Data handling | TSI-annotation | WorkflowHub | |||
| 2022-11-12 | 2022-11-14 | Annotation | https://usegalaxy.eu | |||||
| 2022-09-19 | 2022-09-19 | Annotation | gene convert | https://usegalaxy.eu | ||||
| 2012-10-10 | 2012-10-10 | bedGraph GFF | https://usegalaxy.org | |||||
| 2021-07-20 | 2021-11-03 | https://usegalaxy.org | ||||||
| 2020-07-23 | 2023-01-16 | Apache-2.0 | Climate Galaxy copernicus | WorkflowHub | ||||
| 2024-01-16 | 2024-01-16 | name:climate | https://usegalaxy.eu | |||||
| 2023-01-27 | 2023-02-04 | Validation Sequence trimming Read summarisation RNA-Seq quantification Read pre-processing Sequence alignment Primer removal Sequencing quality control | https://usegalaxy.org | |||||
| 2017-06-09 | 2017-07-14 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | Annotation NextSeq MiSeq Illumina | https://usegalaxy.org.au | ||||
| 2022-12-27 | 2022-12-27 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2013-11-22 | 2016-01-25 | https://usegalaxy.org | ||||||
| 2024-03-18 | 2024-03-18 | Visualisation Taxonomic classification | virology kraken | https://usegalaxy.org | ||||
| 2022-07-05 | 2023-01-12 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org | |||||
| 2020-01-08 | 2020-07-21 | imported | https://usegalaxy.org | |||||
| 2023-11-08 | 2023-11-08 | Sequence contamination filtering Statistical calculation Visualisation Taxonomic classification Scatter plot plotting Box-Whisker plot plotting Sequence composition calculation Sequencing quality control | https://usegalaxy.org | |||||
| 2023-07-29 | 2023-07-29 | Sequence contamination filtering Statistical calculation Visualisation Taxonomic classification Genome assembly Sequence composition calculation Aggregation Sequencing quality control | https://usegalaxy.eu | |||||
| 2024-05-14 | 2024-05-29 | MIT | Statistical calculation Base-calling Mapping Variant calling SNP detection Validation Sequence contamination filtering Pairwise sequence alignment Sequence assembly Sequencing quality control | COVID-19 ARTIC ONT covid19.galaxyproject.org | https://usegalaxy.eu | |||
| 2023-11-24 | 2023-11-24 | Differential gene expression analysis RNA-Seq analysis | https://usegalaxy.org | |||||
| 2023-07-19 | 2023-08-24 | CC-BY-4.0 | Sequence composition calculation RNA-Seq quantification Gene expression analysis | name:transcriptomics name:singlecell name:training | https://usegalaxy.org | |||
| 2023-12-14 | 2023-12-14 | Genome assembly De-novo assembly Aggregation Pairwise sequence alignment Sequence analysis Box-Whisker plot plotting Mapping assembly Sequence assembly visualisation Scatter plot plotting | metagenomics name:microGalaxy | https://usegalaxy.eu | ||||
| 2024-04-12 | 2024-05-27 | Genome visualisation Genome assembly Sequence annotation Scaffolding Sequence analysis Transcriptome assembly Genome annotation RNA-Seq analysis Differential protein expression profiling Gene prediction Editing Sequence assembly validation | Genomeannotation Helixer Visualization Red | https://usegalaxy.eu | ||||
| 2018-11-13 | 2018-11-13 | Visualisation Prediction and recognition | https://usegalaxy.eu | |||||
| 2020-09-11 | 2020-09-11 | Genome visualisation Sequence alignment analysis Data handling Genome assembly Local alignment Read mapping Global alignment Sequence contamination filtering Sequence analysis Sequence file editing Sequence assembly visualisation Sequence alignment Sequencing quality control | https://usegalaxy.eu | |||||
| 2024-07-02 | 2024-07-02 | https://usegalaxy.org | ||||||
| 2022-05-16 | 2022-05-24 | Sequence alignment Nucleic acid sequence analysis | https://usegalaxy.org | |||||
| 2023-05-01 | 2023-05-01 | Statistical calculation Data handling RNA-Seq quantification Gene expression analysis Sequence composition calculation Primer removal Sequence annotation Sequence trimming RNA-Seq analysis Read pre-processing Sequencing quality control | https://usegalaxy.org | |||||
| 2024-05-29 | 2024-05-31 | MIT | Formatting Genome indexing Read mapping Validation Sequence contamination filtering Generation Sequence alignment Sequencing quality control | mpxv generic cloud-costs | https://usegalaxy.org | |||
| 2023-01-25 | 2023-01-25 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2024-06-12 | 2024-06-12 | Mapping | https://usegalaxy.eu | |||||
| 2024-04-22 | 2024-04-22 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Sequence annotation Differential gene expression analysis RNA-Seq analysis Transcriptome assembly Read summarisation Sequencing quality control | https://usegalaxy.org | |||||
| 2020-11-02 | 2020-11-02 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2024-04-02 | 2024-04-11 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2024-05-30 | 2024-06-07 | Sequence contamination filtering Statistical calculation Formatting Sequence composition calculation Sequencing quality control | https://usegalaxy.org | |||||
| 2014-09-09 | 2014-09-09 | fastq paired-end formatting | https://usegalaxy.org | |||||
| 2020-02-14 | 2020-02-18 | Sequence alignment analysis Local alignment Global alignment Sequence analysis Multiple sequence alignment Sequence alignment | https://usegalaxy.org | |||||
| 2024-02-16 | 2024-03-02 | CC-BY-4.0 | MERS NSP13 SARS-CoV-2 coronavirus covid-19 covid19.galaxyproject.org helicase molecular dynamics rna virus | WorkflowHub | ||||
| 2022-11-04 | 2023-07-14 | MIT | https://usegalaxy.eu | |||||
| 2024-02-16 | 2024-03-02 | CC-BY-4.0 | MERS NSP13 SARS-CoV-2 coronavirus covid-19 covid19.galaxyproject.org helicase molecular dynamics rna virus | WorkflowHub | ||||
| 2022-11-04 | 2023-07-14 | MIT | https://usegalaxy.eu | |||||
| 2021-12-06 | 2022-04-18 | Variant calling Statistical calculation Read mapping | https://usegalaxy.org | |||||
| 2022-04-14 | 2022-04-18 | Variant calling Statistical calculation Read mapping | https://usegalaxy.org | |||||
| 2024-04-10 | 2024-04-10 | Validation Read summarisation RNA-Seq quantification Sequencing quality control | https://usegalaxy.org.au | |||||
| 2019-10-06 | 2019-10-06 | Statistical calculation Formatting Data handling Sequence alignment analysis Genome indexing Sequence composition calculation Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2020-02-25 | 2020-02-26 | Statistical calculation Formatting Data handling Sequence alignment analysis Genome indexing Sequence composition calculation Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2016-05-09 | 2016-05-15 | Variant calling Statistical calculation Read mapping | https://usegalaxy.org | |||||
| 2017-06-04 | 2017-06-04 | Variant calling Formatting Statistical calculation Genome indexing Generation Read mapping Sequence alignment | https://usegalaxy.org | |||||
| 2017-07-23 | 2017-07-23 | Validation Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.org | |||||
| 2017-09-07 | 2017-09-08 | Variant calling Statistical calculation Read mapping | https://usegalaxy.org | |||||
| 2017-05-05 | 2017-05-06 | Variant calling Formatting Read mapping Statistical calculation | https://usegalaxy.org | |||||
| 2018-06-23 | 2018-06-25 | Formatting Statistical calculation Data handling Sequence alignment analysis Genome indexing Read mapping Variant calling Generation Sequence alignment | https://usegalaxy.org | |||||
| 2021-11-16 | 2022-01-03 | Formatting Variant calling Sequence contamination filtering Pairwise sequence alignment Scatter plot plotting Box-Whisker plot plotting Sequence assembly visualisation Read pre-processing Sequencing quality control | https://usegalaxy.eu | |||||
| 2020-05-22 | 2020-05-25 | Validation Sequence contamination filtering Genome indexing Generation Read mapping Sequence alignment Sequencing quality control | COVID-19 ARTIC | https://usegalaxy.org.au | ||||
| 2021-06-11 | 2022-07-15 | Peptide database search Visualisation Conversion Prediction and recognition | name:COVID | https://usegalaxy.eu | ||||
| 2020-05-20 | 2022-11-23 | Pairwise sequence alignment Variant calling Base-calling Mapping Sequence assembly | https://usegalaxy.eu | |||||
| 2020-03-18 | 2020-03-22 | Statistical calculation Formatting Data handling Genome indexing Sequence composition calculation Read mapping Pairwise sequence alignment Sequence contamination filtering Validation Box-Whisker plot plotting Generation Sequencing quality control Sequence alignment Scatter plot plotting | covid-19 | https://usegalaxy.fr | ||||
| 2020-03-18 | 2020-03-22 | Sequence assembly visualisation Aggregation Genome assembly | covid-19 | https://usegalaxy.fr | ||||
| 2020-03-18 | 2020-03-24 | Phylogenetic tree generation (maximum likelihood and Bayesian methods) Multiple sequence alignment Formatting Phylogenetic tree generation (from molecular sequences) | covid-19 | https://usegalaxy.fr | ||||
| 2020-03-18 | 2020-03-25 | Genome indexing Generation Read mapping Sequence alignment | covid-19 | https://usegalaxy.fr | ||||
| 2020-03-18 | 2020-03-24 | Sequence alignment analysis Local alignment Global alignment Sequence analysis Multiple sequence alignment Sequence alignment | covid-19 | https://usegalaxy.fr | ||||
| 2020-03-18 | 2020-03-24 | Phylogenetic tree generation (maximum likelihood and Bayesian methods) Statistical calculation Sequence alignment analysis Local alignment Phylogenetic tree generation (from molecular sequences) Global alignment Sequence analysis Multiple sequence alignment Sequence alignment | covid-19 | https://usegalaxy.fr | ||||
| 2020-02-23 | 2020-02-23 | Statistical calculation Formatting Genome indexing Sequence composition calculation Read mapping Pairwise sequence alignment Sequence contamination filtering Validation Box-Whisker plot plotting Generation Sequencing quality control Sequence alignment Scatter plot plotting | COVID-19 Alternate-pre-processing | https://usegalaxy.org.au | ||||
| 2020-02-11 | 2020-02-21 | Sequence assembly visualisation Aggregation Genome assembly | https://usegalaxy.org | |||||
| 2020-02-21 | 2020-02-22 | Sequence assembly visualisation Aggregation Genome assembly | COVID-19 Assembly | https://usegalaxy.org.au | ||||
| 2020-02-20 | 2020-02-21 | Sequence assembly visualisation Aggregation Genome assembly | COVID-19 | https://usegalaxy.eu | ||||
| 2020-04-18 | 2020-05-06 | Sequence database search Formatting Sequence profile generation Statistical calculation de Novo sequencing Format validation De-novo assembly Read mapping Coding region prediction Differential gene expression analysis Sequence clustering Generation Data retrieval Sequencing quality control Data handling Genome indexing Database search Sequence annotation Validation Sequence contamination filtering Gene prediction Conversion Probabilistic sequence generation Sequence generation Multiple sequence alignment Sequence alignment | https://usegalaxy.eu | |||||
| 2020-05-02 | 2020-05-08 | Sequence database search Formatting Sequence profile generation Statistical calculation de Novo sequencing Format validation De-novo assembly Coding region prediction Differential gene expression analysis Sequence clustering Data retrieval Sequencing quality control Data handling Database search Sequence annotation Validation Sequence contamination filtering Conversion Probabilistic sequence generation Multiple sequence alignment Sequence generation Gene prediction | https://usegalaxy.eu | |||||
| 2021-03-03 | 2021-03-03 | Mapping | COVID-19 covid19.galaxyproject.org | https://usegalaxy.org.au | ||||
| 2022-03-18 | 2022-03-18 | MIT | Mapping | COVID-19 covid19.galaxyproject.org | https://usegalaxy.eu | |||
| 2022-03-18 | 2022-03-18 | MIT | Mapping | COVID-19 covid19.galaxyproject.org | https://usegalaxy.org | |||
| 2022-03-18 | 2022-03-18 | MIT | Mapping | COVID-19 covid19.galaxyproject.org | https://usegalaxy.org.au | |||
| 2022-03-18 | 2022-03-18 | MIT | Mapping | COVID-19 covid19.galaxyproject.org | https://usegalaxy.eu | |||
| 2022-03-18 | 2022-03-18 | MIT | Mapping | COVID-19 covid19.galaxyproject.org | https://usegalaxy.org | |||
| 2022-03-18 | 2022-03-18 | MIT | Mapping | COVID-19 covid19.galaxyproject.org | https://usegalaxy.org.au | |||
| 2022-03-18 | 2022-03-18 | MIT | Mapping | COVID-19 covid19.galaxyproject.org | https://usegalaxy.eu | |||
| 2022-03-18 | 2022-03-18 | MIT | Mapping | COVID-19 covid19.galaxyproject.org | https://usegalaxy.org | |||
| 2022-03-18 | 2022-03-18 | MIT | Mapping | COVID-19 covid19.galaxyproject.org | https://usegalaxy.org.au | |||
| 2022-03-18 | 2022-03-18 | MIT | Mapping | COVID-19 covid19.galaxyproject.org | https://usegalaxy.eu | |||
| 2022-03-18 | 2022-03-18 | MIT | Mapping | COVID-19 covid19.galaxyproject.org | https://usegalaxy.org | |||
| 2022-03-18 | 2022-03-18 | MIT | Mapping | COVID-19 covid19.galaxyproject.org | https://usegalaxy.org.au | |||
| 2022-10-27 | 2022-10-27 | MIT | Mapping | COVID-19 covid19.galaxyproject.org | https://usegalaxy.eu | |||
| 2022-10-27 | 2022-10-27 | MIT | Mapping | COVID-19 covid19.galaxyproject.org | https://usegalaxy.org | |||
| 2022-10-27 | 2022-10-27 | MIT | Mapping | COVID-19 covid19.galaxyproject.org | https://usegalaxy.org.au | |||
| 2023-11-30 | 2023-11-30 | MIT | Mapping | COVID-19 covid19.galaxyproject.org | https://usegalaxy.eu | |||
| 2023-11-30 | 2023-11-30 | MIT | Mapping | COVID-19 covid19.galaxyproject.org | https://usegalaxy.org | |||
| 2023-12-07 | 2023-12-07 | MIT | Mapping | COVID-19 covid19.galaxyproject.org | https://usegalaxy.org.au | |||
| 2023-11-30 | 2023-11-30 | MIT | Mapping | COVID-19 covid19.galaxyproject.org | https://usegalaxy.org.au | |||
| 2024-03-07 | 2024-03-07 | MIT | Mapping | COVID-19 covid19.galaxyproject.org | https://usegalaxy.eu | |||
| 2024-03-07 | 2024-03-07 | MIT | Mapping | COVID-19 covid19.galaxyproject.org | https://usegalaxy.org | |||
| 2024-03-07 | 2024-03-07 | MIT | Mapping | COVID-19 covid19.galaxyproject.org | https://usegalaxy.org.au | |||
| 2022-02-02 | 2022-02-07 | MIT | Mapping | COVID-19 covid19.galaxyproject.org iwc | https://usegalaxy.eu | |||
| 2021-08-11 | 2021-09-13 | MIT | Mapping | covid19.galaxyproject.org emergen covid-19 | https://usegalaxy.fr | |||
| 2022-04-15 | 2022-04-15 | MIT | Mapping | covid19.galaxyproject.org covid-19 emergen latest | https://usegalaxy.fr | |||
| 2021-07-06 | 2021-07-06 | MIT | Mapping | COVID-19 covid19.galaxyproject.org emergen | https://usegalaxy.fr | |||
| 2020-02-21 | 2020-02-21 | Sequence alignment analysis Local alignment Global alignment Sequence analysis Multiple sequence alignment Sequence alignment | COVID-19 | https://usegalaxy.eu | ||||
| 2020-06-18 | 2023-02-13 | Apache-2.0 | Formatting Data handling Genome indexing Read mapping Validation Sequence contamination filtering Generation Sequence alignment Sequencing quality control | GATK4 Galaxy INDELs SNPs | WorkflowHub | |||
| 2020-04-18 | 2020-06-18 | Formatting Data handling Genome indexing Read mapping Validation Sequence contamination filtering Generation Sequence alignment Sequencing quality control | https://usegalaxy.eu | |||||
| 2020-02-12 | 2020-02-21 | Phylogenetic tree generation (maximum likelihood and Bayesian methods) Multiple sequence alignment Formatting Phylogenetic tree generation (from molecular sequences) | https://usegalaxy.org | |||||
| 2020-02-22 | 2020-02-22 | Phylogenetic tree generation (maximum likelihood and Bayesian methods) Multiple sequence alignment Formatting Phylogenetic tree generation (from molecular sequences) | COVID-19 MCRA | https://usegalaxy.org.au | ||||
| 2020-02-21 | 2020-02-21 | Phylogenetic tree generation (maximum likelihood and Bayesian methods) Multiple sequence alignment Formatting Phylogenetic tree generation (from molecular sequences) | COVID-19 | https://usegalaxy.eu | ||||
| 2020-04-27 | 2020-06-25 | Read mapping Genetic variation analysis | https://usegalaxy.eu | |||||
| 2021-02-02 | 2023-02-13 | Apache-2.0 | Sequence trimming Sequence alignment Genome indexing Generation Read pre-processing Read mapping Primer removal | WorkflowHub | ||||
| 2020-02-21 | 2020-02-22 | Statistical calculation Formatting Data handling Genome indexing Sequence composition calculation Read mapping Pairwise sequence alignment Sequence contamination filtering Validation Box-Whisker plot plotting Generation Sequencing quality control Sequence alignment Scatter plot plotting | COVID-19 Pre-processing | https://usegalaxy.org.au | ||||
| 2020-02-23 | 2020-02-23 | Statistical calculation Formatting Genome indexing Sequence composition calculation Read mapping Pairwise sequence alignment Sequence contamination filtering Validation Box-Whisker plot plotting Generation Sequencing quality control Sequence alignment Scatter plot plotting | https://usegalaxy.org | |||||
| 2020-02-20 | 2020-03-29 | Statistical calculation Formatting Data handling Genome indexing Sequence composition calculation Read mapping Pairwise sequence alignment Sequence contamination filtering Validation Box-Whisker plot plotting Generation Sequencing quality control Sequence alignment Scatter plot plotting | COVID-19 | https://usegalaxy.eu | ||||
| 2020-02-23 | 2020-02-23 | Statistical calculation Formatting Genome indexing Sequence composition calculation Read mapping Pairwise sequence alignment Sequence contamination filtering Validation Box-Whisker plot plotting Generation Sequencing quality control Sequence alignment Scatter plot plotting | COVID-19 | https://usegalaxy.eu | ||||
| 2020-02-21 | 2020-02-21 | Phylogenetic tree generation (maximum likelihood and Bayesian methods) Statistical calculation Sequence alignment analysis Local alignment Phylogenetic tree generation (from molecular sequences) Global alignment Sequence analysis Multiple sequence alignment Sequence alignment | COVID-19 | https://usegalaxy.eu | ||||
| 2020-02-21 | 2020-02-21 | Phylogenetic tree generation (maximum likelihood and Bayesian methods) Statistical calculation Sequence alignment analysis Local alignment Phylogenetic tree generation (from molecular sequences) Global alignment Sequence analysis Multiple sequence alignment Sequence alignment | https://usegalaxy.org | |||||
| 2020-02-22 | 2020-02-22 | Phylogenetic tree generation (maximum likelihood and Bayesian methods) Statistical calculation Sequence alignment analysis Local alignment Phylogenetic tree generation (from molecular sequences) Global alignment Sequence analysis Multiple sequence alignment Sequence alignment | COVID-19 Recombination | https://usegalaxy.org.au | ||||
| 2020-02-20 | 2020-02-20 | Sequence alignment analysis Local alignment Global alignment Sequence analysis Multiple sequence alignment Sequence alignment | https://usegalaxy.org | |||||
| 2020-02-22 | 2020-02-22 | Sequence alignment analysis Local alignment Global alignment Sequence analysis Multiple sequence alignment Sequence alignment | COVID-19 S-gene | https://usegalaxy.org.au | ||||
| 2021-09-13 | 2021-09-13 | MIT | Genome indexing Read mapping Tree-based sequence alignment Variant calling Sequence contamination filtering Methylation analysis SNP detection Validation Variant classification Generation Sequence alignment Sequencing quality control | emergen covid-19 | https://usegalaxy.fr | |||
| 2022-04-15 | 2022-04-15 | MIT | Genome indexing Read mapping Tree-based sequence alignment Variant calling Sequence contamination filtering Methylation analysis SNP detection Validation Variant classification Generation Sequence alignment Sequencing quality control | covid-19 artic iwc emergen latest | https://usegalaxy.fr | |||
| 2020-04-13 | 2020-05-06 | Sequence database search Formatting Sequence profile generation Statistical calculation de Novo sequencing Format validation De-novo assembly Read mapping Coding region prediction Differential gene expression analysis Sequence clustering Generation Data retrieval Sequencing quality control Data handling Genome indexing Database search Sequence annotation Validation Sequence contamination filtering RNA-Seq analysis Transcriptome assembly Gene prediction Conversion Probabilistic sequence generation Sequence generation Multiple sequence alignment Sequence alignment | https://usegalaxy.eu | |||||
| 2020-04-16 | 2020-05-06 | Sequence database search Formatting Sequence profile generation Statistical calculation de Novo sequencing Format validation De-novo assembly Read mapping Aggregation Coding region prediction Differential gene expression analysis Sequence clustering Generation Data retrieval Sequencing quality control Data handling Genome assembly Genome indexing Database search Validation Sequence contamination filtering Gene prediction Conversion Probabilistic sequence generation Sequence generation Multiple sequence alignment Sequence alignment | https://usegalaxy.eu | |||||
| 2020-02-22 | 2020-02-22 | Genome indexing Generation Read mapping Sequence alignment | COVID-19 Variation | https://usegalaxy.org.au | ||||
| 2021-01-06 | 2021-01-06 | Formatting Genome indexing Read mapping Validation Sequence contamination filtering SNP detection Generation Sequence alignment Sequencing quality control | COVID19 RNASeq PE Illumina Fastq->VCF | https://usegalaxy.eu | ||||
| 2021-03-03 | 2021-03-03 | Formatting Genome indexing Read mapping Validation Sequence contamination filtering SNP detection Generation Sequence alignment Sequencing quality control | COVID19 RNASeq PE Illumina Fastq->VCF | https://usegalaxy.org.au | ||||
| 2022-03-18 | 2022-03-18 | MIT | Statistical calculation Base-calling Variant calling Sequence contamination filtering Pairwise sequence alignment SNP detection Validation Sequence assembly Sequencing quality control | COVID-19 ARTIC ONT covid19.galaxyproject.org | https://usegalaxy.eu | |||
| 2022-03-18 | 2022-03-18 | MIT | Statistical calculation Base-calling Variant calling Sequence contamination filtering Pairwise sequence alignment SNP detection Validation Sequence assembly Sequencing quality control | COVID-19 ARTIC ONT covid19.galaxyproject.org | https://usegalaxy.org | |||
| 2022-03-18 | 2022-03-18 | MIT | Statistical calculation Base-calling Variant calling Sequence contamination filtering Pairwise sequence alignment SNP detection Validation Sequence assembly Sequencing quality control | COVID-19 ARTIC ONT covid19.galaxyproject.org | https://usegalaxy.org.au | |||
| 2022-03-18 | 2022-03-18 | MIT | Statistical calculation Base-calling Variant calling Sequence contamination filtering SNP detection Pairwise sequence alignment Validation Sequence assembly Sequencing quality control | COVID-19 ARTIC ONT covid19.galaxyproject.org | https://usegalaxy.eu | |||
| 2022-03-18 | 2022-03-18 | MIT | Statistical calculation Base-calling Variant calling Sequence contamination filtering SNP detection Pairwise sequence alignment Validation Sequence assembly Sequencing quality control | COVID-19 ARTIC ONT covid19.galaxyproject.org | https://usegalaxy.org | |||
| 2022-03-18 | 2022-03-18 | MIT | Statistical calculation Base-calling Variant calling Sequence contamination filtering SNP detection Pairwise sequence alignment Validation Sequence assembly Sequencing quality control | COVID-19 ARTIC ONT covid19.galaxyproject.org | https://usegalaxy.org.au | |||
| 2022-03-18 | 2022-03-18 | MIT | Statistical calculation Base-calling Variant calling Sequence contamination filtering SNP detection Pairwise sequence alignment Validation Sequence assembly Sequencing quality control | COVID-19 ARTIC ONT covid19.galaxyproject.org | https://usegalaxy.eu | |||
| 2022-03-18 | 2022-03-18 | MIT | Statistical calculation Base-calling Variant calling Sequence contamination filtering SNP detection Pairwise sequence alignment Validation Sequence assembly Sequencing quality control | COVID-19 ARTIC ONT covid19.galaxyproject.org | https://usegalaxy.org | |||
| 2022-03-18 | 2022-03-18 | MIT | Statistical calculation Base-calling Variant calling Sequence contamination filtering SNP detection Pairwise sequence alignment Validation Sequence assembly Sequencing quality control | COVID-19 ARTIC ONT covid19.galaxyproject.org | https://usegalaxy.org.au | |||
| 2022-03-18 | 2022-03-18 | MIT | Statistical calculation Base-calling Mapping Variant calling SNP detection Validation Sequence contamination filtering Pairwise sequence alignment Sequence assembly Sequencing quality control | COVID-19 ARTIC ONT covid19.galaxyproject.org | https://usegalaxy.eu | |||
| 2022-03-18 | 2022-03-18 | MIT | Statistical calculation Base-calling Mapping Variant calling SNP detection Validation Sequence contamination filtering Pairwise sequence alignment Sequence assembly Sequencing quality control | COVID-19 ARTIC ONT covid19.galaxyproject.org | https://usegalaxy.org | |||
| 2022-03-18 | 2022-03-18 | MIT | Statistical calculation Base-calling Mapping Variant calling SNP detection Validation Sequence contamination filtering Pairwise sequence alignment Sequence assembly Sequencing quality control | COVID-19 ARTIC ONT covid19.galaxyproject.org | https://usegalaxy.org.au | |||
| 2022-03-18 | 2022-03-18 | MIT | Statistical calculation Base-calling Mapping Variant calling SNP detection Validation Sequence contamination filtering Pairwise sequence alignment Sequence assembly Sequencing quality control | COVID-19 ARTIC ONT covid19.galaxyproject.org | https://usegalaxy.eu | |||
| 2022-03-18 | 2022-03-18 | MIT | Statistical calculation Base-calling Mapping Variant calling SNP detection Validation Sequence contamination filtering Pairwise sequence alignment Sequence assembly Sequencing quality control | COVID-19 ARTIC ONT covid19.galaxyproject.org | https://usegalaxy.org | |||
| 2022-03-18 | 2022-03-18 | MIT | Statistical calculation Base-calling Mapping Variant calling SNP detection Validation Sequence contamination filtering Pairwise sequence alignment Sequence assembly Sequencing quality control | COVID-19 ARTIC ONT covid19.galaxyproject.org | https://usegalaxy.org.au | |||
| 2023-11-30 | 2023-11-30 | MIT | Statistical calculation Base-calling Mapping Variant calling SNP detection Validation Sequence contamination filtering Pairwise sequence alignment Sequence assembly Sequencing quality control | COVID-19 ARTIC ONT covid19.galaxyproject.org | https://usegalaxy.eu | |||
| 2021-02-22 | 2021-02-22 | Statistical calculation Base-calling Variant calling Sequence contamination filtering Pairwise sequence alignment SNP detection Validation Sequence assembly Sequencing quality control | COVID-19 ARTIC ONT covid19.galaxyproject.org | https://usegalaxy.org | ||||
| 2021-03-03 | 2021-03-03 | Statistical calculation Base-calling Variant calling Sequence contamination filtering Pairwise sequence alignment SNP detection Validation Sequence assembly Sequencing quality control | COVID-19 ARTIC ONT covid19.galaxyproject.org | https://usegalaxy.org.au | ||||
| 2021-02-22 | 2021-02-22 | Statistical calculation Base-calling Variant calling Sequence contamination filtering Pairwise sequence alignment SNP detection Validation Sequence assembly Sequencing quality control | COVID-19 ARTIC ONT covid19.galaxyproject.org | https://usegalaxy.org.au | ||||
| 2021-09-24 | 2021-09-24 | MIT | Statistical calculation Base-calling Mapping Variant calling SNP detection Validation Sequence contamination filtering Pairwise sequence alignment Sequence assembly Sequencing quality control | COVID-19 ARTIC ONT covid19.galaxyproject.org iwc | https://usegalaxy.eu | |||
| 2021-08-10 | 2022-04-15 | MIT | Statistical calculation Base-calling Variant calling Sequence contamination filtering SNP detection Pairwise sequence alignment Validation Sequence assembly Sequencing quality control | ONT covid19.galaxyproject.org emergen covid-19 artic | https://usegalaxy.fr | |||
| 2021-11-02 | 2021-11-02 | MIT | Statistical calculation Base-calling Mapping Variant calling SNP detection Validation Sequence contamination filtering Pairwise sequence alignment Sequence assembly Sequencing quality control | covid-19 artic ont covid19.galaxyproject.org emergen | https://usegalaxy.fr | |||
| 2022-04-15 | 2022-04-15 | MIT | Statistical calculation Base-calling Mapping Variant calling SNP detection Validation Sequence contamination filtering Pairwise sequence alignment Sequence assembly Sequencing quality control | covid-19 artic ont covid19.galaxyproject.org emergen latest | https://usegalaxy.fr | |||
| 2022-03-18 | 2022-03-18 | MIT | Genome indexing Read mapping Validation Sequence contamination filtering SNP detection Generation Sequence alignment Sequencing quality control | COVID-19 ARTIC covid19.galaxyproject.org | https://usegalaxy.eu | |||
| 2022-03-18 | 2022-03-18 | MIT | Genome indexing Read mapping Validation Sequence contamination filtering SNP detection Generation Sequence alignment Sequencing quality control | COVID-19 ARTIC covid19.galaxyproject.org | https://usegalaxy.org | |||
| 2022-03-18 | 2022-03-18 | MIT | Genome indexing Read mapping Validation Sequence contamination filtering SNP detection Generation Sequence alignment Sequencing quality control | COVID-19 ARTIC covid19.galaxyproject.org | https://usegalaxy.org.au | |||
| 2022-03-18 | 2022-03-18 | MIT | Genome indexing Read mapping Validation Sequence contamination filtering SNP detection Generation Sequence alignment Sequencing quality control | COVID-19 ARTIC covid19.galaxyproject.org | https://usegalaxy.eu | |||
| 2022-03-18 | 2022-03-18 | MIT | Genome indexing Read mapping Validation Sequence contamination filtering SNP detection Generation Sequence alignment Sequencing quality control | COVID-19 ARTIC covid19.galaxyproject.org | https://usegalaxy.org | |||
| 2022-03-18 | 2022-03-18 | MIT | Genome indexing Read mapping Validation Sequence contamination filtering SNP detection Generation Sequence alignment Sequencing quality control | COVID-19 ARTIC covid19.galaxyproject.org | https://usegalaxy.org.au | |||
| 2022-03-18 | 2022-03-18 | MIT | Genome indexing Read mapping Validation Sequence contamination filtering SNP detection Generation Sequence alignment Sequencing quality control | COVID-19 ARTIC covid19.galaxyproject.org | https://usegalaxy.eu | |||
| 2022-03-18 | 2022-03-18 | MIT | Genome indexing Read mapping Validation Sequence contamination filtering SNP detection Generation Sequence alignment Sequencing quality control | COVID-19 ARTIC covid19.galaxyproject.org | https://usegalaxy.org | |||
| 2022-03-18 | 2022-03-18 | MIT | Genome indexing Read mapping Validation Sequence contamination filtering SNP detection Generation Sequence alignment Sequencing quality control | COVID-19 ARTIC covid19.galaxyproject.org | https://usegalaxy.org.au | |||
| 2022-03-18 | 2022-03-18 | MIT | Genome indexing Read mapping Validation Sequence contamination filtering SNP detection Generation Sequence alignment Sequencing quality control | COVID-19 ARTIC covid19.galaxyproject.org | https://usegalaxy.eu | |||
| 2022-03-18 | 2022-03-18 | MIT | Genome indexing Read mapping Validation Sequence contamination filtering SNP detection Generation Sequence alignment Sequencing quality control | COVID-19 ARTIC covid19.galaxyproject.org | https://usegalaxy.org | |||
| 2022-03-18 | 2022-03-18 | MIT | Genome indexing Read mapping Validation Sequence contamination filtering SNP detection Generation Sequence alignment Sequencing quality control | COVID-19 ARTIC covid19.galaxyproject.org | https://usegalaxy.org.au | |||
| 2022-03-18 | 2022-03-18 | MIT | Genome indexing Read mapping Validation Sequence contamination filtering SNP detection Generation Sequence alignment Sequencing quality control | COVID-19 ARTIC covid19.galaxyproject.org | https://usegalaxy.eu | |||
| 2022-03-18 | 2022-03-18 | MIT | Genome indexing Read mapping Validation Sequence contamination filtering SNP detection Generation Sequence alignment Sequencing quality control | COVID-19 ARTIC covid19.galaxyproject.org | https://usegalaxy.org | |||
| 2022-03-18 | 2022-03-18 | MIT | Genome indexing Read mapping Validation Sequence contamination filtering SNP detection Generation Sequence alignment Sequencing quality control | COVID-19 ARTIC covid19.galaxyproject.org | https://usegalaxy.org.au | |||
| 2022-03-18 | 2022-03-18 | MIT | Genome indexing Read mapping Validation Sequence contamination filtering SNP detection Generation Sequence alignment Sequencing quality control | COVID-19 ARTIC covid19.galaxyproject.org | https://usegalaxy.eu | |||
| 2022-03-18 | 2022-03-18 | MIT | Genome indexing Read mapping Validation Sequence contamination filtering SNP detection Generation Sequence alignment Sequencing quality control | COVID-19 ARTIC covid19.galaxyproject.org | https://usegalaxy.org | |||
| 2022-03-18 | 2022-03-18 | MIT | Genome indexing Read mapping Validation Sequence contamination filtering SNP detection Generation Sequence alignment Sequencing quality control | COVID-19 ARTIC covid19.galaxyproject.org | https://usegalaxy.org.au | |||
| 2022-03-18 | 2022-03-18 | MIT | Validation SNP detection Sequence contamination filtering Genome indexing Generation Read mapping Sequence alignment Sequencing quality control | COVID-19 ARTIC covid19.galaxyproject.org | https://usegalaxy.eu | |||
| 2022-03-31 | 2022-03-31 | MIT | Validation SNP detection Sequence contamination filtering Genome indexing Generation Read mapping Sequence alignment Sequencing quality control | COVID-19 ARTIC covid19.galaxyproject.org | https://usegalaxy.org | |||
| 2022-03-18 | 2022-03-18 | MIT | Validation SNP detection Sequence contamination filtering Genome indexing Generation Read mapping Sequence alignment Sequencing quality control | COVID-19 ARTIC covid19.galaxyproject.org | https://usegalaxy.org.au | |||
| 2024-01-18 | 2024-01-18 | MIT | Validation SNP detection Sequence contamination filtering Genome indexing Generation Read mapping Sequence alignment Sequencing quality control | COVID-19 ARTIC covid19.galaxyproject.org | https://usegalaxy.eu | |||
| 2024-03-07 | 2024-03-07 | MIT | Validation SNP detection Sequence contamination filtering Genome indexing Generation Read mapping Sequence alignment Sequencing quality control | COVID-19 ARTIC covid19.galaxyproject.org | https://usegalaxy.eu | |||
| 2024-03-07 | 2024-03-07 | MIT | Validation SNP detection Sequence contamination filtering Genome indexing Generation Read mapping Sequence alignment Sequencing quality control | COVID-19 ARTIC covid19.galaxyproject.org | https://usegalaxy.org.au | |||
| 2024-10-03 | 2024-10-03 | MIT | Validation SNP detection Sequence contamination filtering Genome indexing Generation Read mapping Sequence alignment Sequencing quality control | COVID-19 ARTIC covid19.galaxyproject.org | https://usegalaxy.eu | |||
| 2024-10-03 | 2024-10-03 | MIT | Validation SNP detection Sequence contamination filtering Genome indexing Generation Read mapping Sequence alignment Sequencing quality control | COVID-19 ARTIC covid19.galaxyproject.org | https://usegalaxy.org | |||
| 2024-10-03 | 2024-10-03 | MIT | Validation SNP detection Sequence contamination filtering Genome indexing Generation Read mapping Sequence alignment Sequencing quality control | COVID-19 ARTIC covid19.galaxyproject.org | https://usegalaxy.org.au | |||
| 2021-02-22 | 2021-02-22 | Genome indexing Read mapping Validation Sequence contamination filtering SNP detection Generation Sequence alignment Sequencing quality control | COVID-19 ARTIC covid19.galaxyproject.org | https://usegalaxy.org | ||||
| 2021-03-03 | 2021-03-03 | Genome indexing Read mapping Validation Sequence contamination filtering SNP detection Generation Sequence alignment Sequencing quality control | COVID-19 ARTIC covid19.galaxyproject.org | https://usegalaxy.org.au | ||||
| 2021-02-22 | 2021-02-22 | Genome indexing Read mapping Validation Sequence contamination filtering SNP detection Generation Sequence alignment Sequencing quality control | COVID-19 ARTIC covid19.galaxyproject.org | https://usegalaxy.org.au | ||||
| 2020-06-28 | 2020-06-28 | Genome indexing Read mapping Validation Sequence contamination filtering SNP detection Generation Sequence alignment Sequencing quality control | COVID-19 ARTIC | https://usegalaxy.org.au | ||||
| 2022-02-28 | 2022-02-28 | MIT | Validation SNP detection Sequence contamination filtering Genome indexing Generation Read mapping Sequence alignment Sequencing quality control | COVID-19 ARTIC covid19.galaxyproject.org iwc | https://usegalaxy.eu | |||
| 2021-08-11 | 2021-09-13 | MIT | Genome indexing Read mapping Validation Sequence contamination filtering SNP detection Generation Sequence alignment Sequencing quality control | covid19.galaxyproject.org emergen covid-19 artic | https://usegalaxy.fr | |||
| 2022-04-15 | 2022-06-08 | MIT | Validation SNP detection Sequence contamination filtering Genome indexing Generation Read mapping Sequence alignment Sequencing quality control | covid19.galaxyproject.org emergen covid-19 artic latest | https://usegalaxy.fr | |||
| 2021-06-04 | 2021-07-07 | MIT | Genome indexing Read mapping Validation Sequence contamination filtering SNP detection Generation Sequence alignment Sequencing quality control | COVID-19 ARTIC covid19.galaxyproject.org emergen | https://usegalaxy.fr | |||
| 2021-06-03 | 2021-06-04 | MIT | Genome indexing Read mapping Validation Sequence contamination filtering SNP detection Generation Sequence alignment Sequencing quality control | COVID-19 ARTIC covid19.galaxyproject.org | https://usegalaxy.fr | |||
| 2022-03-18 | 2022-03-18 | MIT | Formatting Genome indexing Read mapping Validation Sequence contamination filtering SNP detection Generation Sequence alignment Sequencing quality control | COVID-19 covid19.galaxyproject.org | https://usegalaxy.eu | |||
| 2022-03-18 | 2022-03-18 | MIT | Formatting Genome indexing Read mapping Validation Sequence contamination filtering SNP detection Generation Sequence alignment Sequencing quality control | COVID-19 covid19.galaxyproject.org | https://usegalaxy.org | |||
| 2022-03-18 | 2022-03-18 | MIT | Formatting Genome indexing Read mapping Validation Sequence contamination filtering SNP detection Generation Sequence alignment Sequencing quality control | COVID-19 covid19.galaxyproject.org | https://usegalaxy.org.au | |||
| 2022-03-18 | 2022-03-18 | MIT | Formatting Genome indexing Read mapping Validation Sequence contamination filtering SNP detection Generation Sequence alignment Sequencing quality control | COVID-19 covid19.galaxyproject.org iwc emergen_validated | https://usegalaxy.eu | |||
| 2022-03-18 | 2022-03-18 | MIT | Formatting Genome indexing Read mapping Validation Sequence contamination filtering SNP detection Generation Sequence alignment Sequencing quality control | COVID-19 covid19.galaxyproject.org iwc emergen_validated | https://usegalaxy.org | |||
| 2022-03-18 | 2022-03-18 | MIT | Formatting Genome indexing Read mapping Validation Sequence contamination filtering SNP detection Generation Sequence alignment Sequencing quality control | COVID-19 covid19.galaxyproject.org iwc emergen_validated | https://usegalaxy.org.au | |||
| 2022-03-18 | 2022-03-18 | MIT | Formatting Genome indexing Read mapping Validation Sequence contamination filtering SNP detection Generation Sequence alignment Sequencing quality control | COVID-19 covid19.galaxyproject.org iwc emergen_validated | https://usegalaxy.eu | |||
| 2022-03-18 | 2022-03-18 | MIT | Formatting Genome indexing Read mapping Validation Sequence contamination filtering SNP detection Generation Sequence alignment Sequencing quality control | COVID-19 covid19.galaxyproject.org iwc emergen_validated | https://usegalaxy.org | |||
| 2022-03-18 | 2022-03-18 | MIT | Formatting Genome indexing Read mapping Validation Sequence contamination filtering SNP detection Generation Sequence alignment Sequencing quality control | COVID-19 covid19.galaxyproject.org iwc emergen_validated | https://usegalaxy.org.au | |||
| 2022-03-18 | 2022-03-18 | MIT | Formatting Genome indexing Read mapping Validation Sequence contamination filtering SNP detection Generation Sequence alignment Sequencing quality control | COVID-19 covid19.galaxyproject.org iwc emergen_validated | https://usegalaxy.eu | |||
| 2022-03-18 | 2022-03-18 | MIT | Formatting Genome indexing Read mapping Validation Sequence contamination filtering SNP detection Generation Sequence alignment Sequencing quality control | COVID-19 covid19.galaxyproject.org iwc emergen_validated | https://usegalaxy.org | |||
| 2022-03-18 | 2022-03-18 | MIT | Formatting Genome indexing Read mapping Validation Sequence contamination filtering SNP detection Generation Sequence alignment Sequencing quality control | COVID-19 covid19.galaxyproject.org iwc emergen_validated | https://usegalaxy.org.au | |||
| 2023-11-30 | 2023-11-30 | MIT | Formatting Genome indexing Read mapping Validation Sequence contamination filtering SNP detection Generation Sequence alignment Sequencing quality control | COVID-19 covid19.galaxyproject.org iwc emergen_validated | https://usegalaxy.eu | |||
| 2023-11-30 | 2023-11-30 | MIT | Formatting Genome indexing Read mapping Validation Sequence contamination filtering SNP detection Generation Sequence alignment Sequencing quality control | COVID-19 covid19.galaxyproject.org iwc emergen_validated | https://usegalaxy.org | |||
| 2023-12-07 | 2023-12-07 | MIT | Formatting Genome indexing Read mapping Validation Sequence contamination filtering SNP detection Generation Sequence alignment Sequencing quality control | COVID-19 covid19.galaxyproject.org iwc emergen_validated | https://usegalaxy.org.au | |||
| 2023-11-30 | 2023-11-30 | MIT | Formatting Genome indexing Read mapping Validation Sequence contamination filtering SNP detection Generation Sequence alignment Sequencing quality control | COVID-19 covid19.galaxyproject.org iwc emergen_validated | https://usegalaxy.org.au | |||
| 2021-02-22 | 2021-02-22 | Formatting Genome indexing Read mapping Validation Sequence contamination filtering SNP detection Generation Sequence alignment Sequencing quality control | COVID-19 covid19.galaxyproject.org | https://usegalaxy.org | ||||
| 2021-03-03 | 2021-03-03 | Formatting Genome indexing Read mapping Validation Sequence contamination filtering SNP detection Generation Sequence alignment Sequencing quality control | COVID-19 covid19.galaxyproject.org | https://usegalaxy.org.au | ||||
| 2021-02-22 | 2021-02-22 | Formatting Genome indexing Read mapping Validation Sequence contamination filtering SNP detection Generation Sequence alignment Sequencing quality control | COVID-19 covid19.galaxyproject.org | https://usegalaxy.org.au | ||||
| 2021-09-24 | 2021-09-24 | MIT | Formatting Genome indexing Read mapping Validation Sequence contamination filtering SNP detection Generation Sequence alignment Sequencing quality control | COVID-19 covid19.galaxyproject.org iwc emergen_validated | https://usegalaxy.eu | |||
| 2021-09-13 | 2021-09-13 | MIT | Formatting Genome indexing Read mapping Validation Sequence contamination filtering SNP detection Generation Sequence alignment Sequencing quality control | covid19.galaxyproject.org emergen_validated emergen covid-19 | https://usegalaxy.fr | |||
| 2022-04-15 | 2022-04-15 | MIT | Formatting Genome indexing Read mapping Validation Sequence contamination filtering SNP detection Generation Sequence alignment Sequencing quality control | covid-19 covid19.galaxyproject.org emergen_validated emergen latest | https://usegalaxy.fr | |||
| 2022-03-18 | 2022-03-18 | MIT | Validation Sequence contamination filtering SNP detection Formatting Read mapping Sequencing quality control | COVID-19 covid19.galaxyproject.org | https://usegalaxy.eu | |||
| 2022-03-18 | 2022-03-18 | MIT | Validation Sequence contamination filtering SNP detection Formatting Read mapping Sequencing quality control | COVID-19 covid19.galaxyproject.org | https://usegalaxy.org | |||
| 2022-03-18 | 2022-03-18 | MIT | Validation Sequence contamination filtering SNP detection Formatting Read mapping Sequencing quality control | COVID-19 covid19.galaxyproject.org | https://usegalaxy.org.au | |||
| 2022-03-18 | 2022-03-18 | MIT | Validation Sequence contamination filtering SNP detection Formatting Read mapping Sequencing quality control | COVID-19 covid19.galaxyproject.org | https://usegalaxy.eu | |||
| 2022-03-18 | 2022-03-18 | MIT | Validation Sequence contamination filtering SNP detection Formatting Read mapping Sequencing quality control | COVID-19 covid19.galaxyproject.org | https://usegalaxy.org | |||
| 2022-03-18 | 2022-03-18 | MIT | Validation Sequence contamination filtering SNP detection Formatting Read mapping Sequencing quality control | COVID-19 covid19.galaxyproject.org | https://usegalaxy.org.au | |||
| 2024-01-18 | 2024-01-18 | MIT | Validation Sequence contamination filtering SNP detection Formatting Read mapping Sequencing quality control | COVID-19 covid19.galaxyproject.org | https://usegalaxy.eu | |||
| 2024-01-18 | 2024-01-18 | MIT | Validation Sequence contamination filtering SNP detection Formatting Read mapping Sequencing quality control | COVID-19 covid19.galaxyproject.org | https://usegalaxy.org | |||
| 2024-01-18 | 2024-01-18 | MIT | Validation Sequence contamination filtering SNP detection Formatting Read mapping Sequencing quality control | COVID-19 covid19.galaxyproject.org | https://usegalaxy.org.au | |||
| 2024-03-14 | 2024-03-14 | MIT | Validation Sequence contamination filtering SNP detection Formatting Read mapping Sequencing quality control | COVID-19 covid19.galaxyproject.org | https://usegalaxy.eu | |||
| 2024-03-28 | 2024-03-28 | MIT | Validation Sequence contamination filtering SNP detection Formatting Read mapping Sequencing quality control | COVID-19 covid19.galaxyproject.org | https://usegalaxy.org.au | |||
| 2021-02-22 | 2021-02-22 | Validation Sequence contamination filtering SNP detection Formatting Read mapping Sequencing quality control | COVID-19 covid19.galaxyproject.org | https://usegalaxy.org | ||||
| 2021-03-03 | 2021-03-03 | Validation Sequence contamination filtering SNP detection Formatting Read mapping Sequencing quality control | COVID-19 covid19.galaxyproject.org | https://usegalaxy.org.au | ||||
| 2021-02-22 | 2021-02-22 | Validation Sequence contamination filtering SNP detection Formatting Read mapping Sequencing quality control | COVID-19 covid19.galaxyproject.org | https://usegalaxy.org.au | ||||
| 2021-09-24 | 2021-09-24 | MIT | Validation Sequence contamination filtering SNP detection Formatting Read mapping Sequencing quality control | COVID-19 covid19.galaxyproject.org iwc | https://usegalaxy.eu | |||
| 2021-09-13 | 2021-09-13 | MIT | Validation Sequence contamination filtering SNP detection Formatting Read mapping Sequencing quality control | covid19.galaxyproject.org emergen covid-19 | https://usegalaxy.fr | |||
| 2022-04-15 | 2022-04-15 | MIT | Validation Sequence contamination filtering SNP detection Formatting Read mapping Sequencing quality control | covid19.galaxyproject.org covid-19 emergen latest | https://usegalaxy.fr | |||
| 2021-02-22 | 2021-02-22 | COVID-19 covid19.galaxyproject.org | https://usegalaxy.org | |||||
| 2021-03-03 | 2021-03-03 | COVID-19 covid19.galaxyproject.org | https://usegalaxy.org.au | |||||
| 2021-02-22 | 2021-02-22 | COVID-19 covid19.galaxyproject.org | https://usegalaxy.org.au | |||||
| 2024-06-10 | 2024-06-10 | MIT | COVID-19 covid19.galaxyproject.org | https://usegalaxy.eu | ||||
| 2021-12-28 | 2022-01-31 | MIT | COVID-19 covid19.galaxyproject.org | https://usegalaxy.org | ||||
| 2022-03-18 | 2022-03-18 | MIT | COVID-19 covid19.galaxyproject.org | https://usegalaxy.eu | ||||
| 2022-03-18 | 2022-03-18 | MIT | COVID-19 covid19.galaxyproject.org | https://usegalaxy.org | ||||
| 2022-03-18 | 2022-03-18 | MIT | COVID-19 covid19.galaxyproject.org | https://usegalaxy.org.au | ||||
| 2022-03-18 | 2022-03-18 | MIT | COVID-19 covid19.galaxyproject.org | https://usegalaxy.eu | ||||
| 2022-03-18 | 2022-03-18 | MIT | COVID-19 covid19.galaxyproject.org | https://usegalaxy.org | ||||
| 2022-03-18 | 2022-03-18 | MIT | COVID-19 covid19.galaxyproject.org | https://usegalaxy.org.au | ||||
| 2022-03-18 | 2022-03-18 | MIT | COVID-19 covid19.galaxyproject.org | https://usegalaxy.eu | ||||
| 2022-03-18 | 2022-03-18 | MIT | COVID-19 covid19.galaxyproject.org | https://usegalaxy.org | ||||
| 2022-03-18 | 2022-03-18 | MIT | COVID-19 covid19.galaxyproject.org | https://usegalaxy.org.au | ||||
| 2022-03-18 | 2022-03-18 | MIT | COVID-19 covid19.galaxyproject.org | https://usegalaxy.eu | ||||
| 2022-03-18 | 2022-03-18 | MIT | COVID-19 covid19.galaxyproject.org | https://usegalaxy.org | ||||
| 2022-03-18 | 2022-03-18 | MIT | COVID-19 covid19.galaxyproject.org | https://usegalaxy.org.au | ||||
| 2022-03-18 | 2022-03-18 | MIT | COVID-19 covid19.galaxyproject.org | https://usegalaxy.eu | ||||
| 2022-03-18 | 2022-03-18 | MIT | COVID-19 covid19.galaxyproject.org | https://usegalaxy.org | ||||
| 2022-03-18 | 2022-03-18 | MIT | COVID-19 covid19.galaxyproject.org | https://usegalaxy.org.au | ||||
| 2022-10-20 | 2022-10-20 | MIT | COVID-19 covid19.galaxyproject.org | https://usegalaxy.eu | ||||
| 2022-10-20 | 2022-10-20 | MIT | COVID-19 covid19.galaxyproject.org | https://usegalaxy.org | ||||
| 2022-10-27 | 2022-10-27 | MIT | COVID-19 covid19.galaxyproject.org | https://usegalaxy.org.au | ||||
| 2023-11-30 | 2023-11-30 | MIT | COVID-19 covid19.galaxyproject.org | https://usegalaxy.eu | ||||
| 2023-11-30 | 2023-11-30 | MIT | COVID-19 covid19.galaxyproject.org | https://usegalaxy.org | ||||
| 2023-12-07 | 2023-12-07 | MIT | COVID-19 covid19.galaxyproject.org | https://usegalaxy.org.au | ||||
| 2023-11-30 | 2023-11-30 | MIT | COVID-19 covid19.galaxyproject.org | https://usegalaxy.org.au | ||||
| 2024-03-07 | 2024-03-07 | MIT | COVID-19 covid19.galaxyproject.org | https://usegalaxy.eu | ||||
| 2024-03-07 | 2024-03-07 | MIT | COVID-19 covid19.galaxyproject.org | https://usegalaxy.org.au | ||||
| 2024-10-03 | 2024-10-03 | MIT | COVID-19 covid19.galaxyproject.org | https://usegalaxy.eu | ||||
| 2024-10-03 | 2024-10-03 | MIT | COVID-19 covid19.galaxyproject.org | https://usegalaxy.org | ||||
| 2024-10-03 | 2024-10-03 | MIT | COVID-19 covid19.galaxyproject.org | https://usegalaxy.org.au | ||||
| 2022-02-12 | 2022-05-13 | MIT | COVID-19 covid19.galaxyproject.org iwc | https://usegalaxy.eu | ||||
| 2021-07-08 | 2021-09-13 | MIT | covid19.galaxyproject.org emergen covid-19 | https://usegalaxy.fr | ||||
| 2022-04-15 | 2022-04-15 | MIT | covid-19 covid19.galaxyproject.org emergen latest | https://usegalaxy.fr | ||||
| 2020-06-18 | 2023-02-13 | Apache-2.0 | Data handling Genome indexing Read mapping Validation Sequence contamination filtering Generation Sequence alignment Sequencing quality control | Galaxy INDELs SNPs VARSCAN2 | WorkflowHub | |||
| 2020-04-18 | 2020-05-08 | Data handling Genome indexing Read mapping Validation Sequence contamination filtering Generation Sequence alignment Sequencing quality control | https://usegalaxy.eu | |||||
| 2022-06-19 | 2022-07-03 | Statistical calculation Formatting Heat map generation Filtering Standardisation and normalisation Protein quantification Peptide database search Visualisation Imputation Conversion Clustering Principal component plotting | https://usegalaxy.eu | |||||
| 2022-07-03 | 2022-07-03 | https://usegalaxy.eu | ||||||
| 2022-06-23 | 2022-07-03 | https://usegalaxy.eu | ||||||
| 2020-11-23 | 2020-11-23 | Visualisation Prediction and recognition | https://usegalaxy.eu | |||||
| 2022-07-03 | 2022-07-03 | Statistical calculation Formatting Heat map generation Filtering Standardisation and normalisation Protein quantification Peptide database search Visualisation Imputation Conversion Clustering Principal component plotting | https://usegalaxy.eu | |||||
| 2020-05-16 | 2020-10-05 | Parsing Image analysis Quantification | CellProfiler CellProfiler | https://usegalaxy.eu | ||||
| 2024-04-16 | 2024-04-16 | Protein feature detection Sequence motif recognition | CPT phage | https://usegalaxy.eu | ||||
| 2024-03-08 | 2024-04-04 | Genome visualisation | CPT phage Apollo | https://usegalaxy.eu | ||||
| 2024-03-21 | 2024-03-21 | CPT phage Apollo | https://usegalaxy.eu | |||||
| 2024-03-01 | 2024-03-05 | Protein feature detection Genome visualisation Sequence motif recognition | CPT phage Apollo | https://usegalaxy.eu | ||||
| 2024-07-02 | 2024-07-02 | Protein feature detection Genome visualisation Sequence motif recognition | CPT phage Apollo | https://usegalaxy.eu | ||||
| 2024-02-08 | 2024-02-08 | Sequence analysis Genome visualisation Sequence annotation Genetic variation analysis | CPT phage Apollo | https://usegalaxy.eu | ||||
| 2016-03-08 | 2016-03-09 | https://usegalaxy.org | ||||||
| 2021-03-17 | 2021-03-17 | https://usegalaxy.eu | ||||||
| 2015-06-12 | 2015-06-12 | Mapping | https://usegalaxy.eu | |||||
| 2022-03-18 | 2022-03-18 | MIT | https://usegalaxy.eu | |||||
| 2022-06-30 | 2022-06-30 | MIT | https://usegalaxy.org | |||||
| 2022-03-18 | 2022-03-18 | MIT | https://usegalaxy.eu | |||||
| 2022-06-30 | 2022-06-30 | MIT | https://usegalaxy.org | |||||
| 2023-11-30 | 2023-11-30 | MIT | https://usegalaxy.eu | |||||
| 2023-11-30 | 2023-11-30 | MIT | https://usegalaxy.org | |||||
| 2013-10-28 | 2013-10-28 | https://usegalaxy.org | ||||||
| 2015-04-10 | 2015-04-10 | https://usegalaxy.org | ||||||
| 2013-10-19 | 2013-10-19 | https://usegalaxy.org | ||||||
| 2024-06-14 | 2024-06-26 | pre-Alphafold | https://usegalaxy.org.au | |||||
| 2019-03-08 | 2019-03-08 | https://usegalaxy.org | ||||||
| 2016-12-07 | 2016-12-08 | https://usegalaxy.org | ||||||
| 2024-06-10 | 2024-06-19 | MIT | Sentinel-2 Turbidity CRIM GeoLabs OGCAPI-Processes OSPD | https://usegalaxy.eu | ||||
| 2022-08-27 | 2022-08-27 | Sequence composition calculation RNA-Seq quantification Gene expression analysis | name:single-cell name:training | https://usegalaxy.eu | ||||
| 2022-08-27 | 2022-09-05 | name:training name:single-cell | https://usegalaxy.eu | |||||
| 2022-09-02 | 2022-09-05 | Differential gene expression analysis | name:training name:single-cell | https://usegalaxy.eu | ||||
| 2023-12-18 | 2024-06-05 | Protein feature detection Genome assembly De-novo assembly Sequence motif recognition Coding region prediction Scaffolding Differential gene expression analysis Genome annotation Transcriptome assembly Sequence clustering Cross-assembly Mapping assembly Gene prediction Filtering Sequence assembly validation Sequencing quality control | https://usegalaxy.org | |||||
| 2023-12-18 | 2023-12-20 | Fold recognition Information extraction De-novo assembly Query and retrieval Sequence motif recognition Coding region prediction Differential gene expression analysis Genome annotation Antimicrobial resistance prediction Box-Whisker plot plotting Sequence clustering Filtering Sequence assembly visualisation Sequence assembly validation Sequencing quality control Protein feature detection Genome assembly Scaffolding Homology-based gene prediction Transcriptome assembly Cross-assembly Mapping assembly Gene prediction Scatter plot plotting | nanopore ONT bacterialgenome assembly annotation | https://usegalaxy.org.au | ||||
| 2021-05-06 | 2021-05-06 | https://usegalaxy.org | ||||||
| 2012-05-08 | 2012-05-08 | https://usegalaxy.org | ||||||
| 2015-06-21 | 2015-06-21 | https://usegalaxy.org | ||||||
| 2022-01-18 | 2022-02-01 | Statistical calculation Formatting RNA-Seq quantification Data handling Sequence alignment analysis Sequence composition calculation Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Peak calling Sequence trimming Read pre-processing Read summarisation Sequencing quality control | CUT_and_RUN | https://usegalaxy.eu | ||||
| 2022-01-18 | 2022-06-13 | Statistical calculation Formatting Data handling Sequence alignment analysis Sequence composition calculation Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUT_and_RUN | https://usegalaxy.eu | ||||
| 2024-09-19 | 2024-09-19 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-09-12 | 2024-09-12 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-09-05 | 2024-09-05 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-08-29 | 2024-08-29 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-08-22 | 2024-08-22 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-08-15 | 2024-08-15 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-08-08 | 2024-08-08 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-08-01 | 2024-08-01 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-07-25 | 2024-07-25 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-07-18 | 2024-07-18 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-07-11 | 2024-07-11 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-07-04 | 2024-07-04 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-06-27 | 2024-06-27 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-06-20 | 2024-06-20 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-06-13 | 2024-06-13 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-06-06 | 2024-06-06 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-05-30 | 2024-05-30 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-05-23 | 2024-05-23 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-05-16 | 2024-05-16 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-05-09 | 2024-05-09 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-05-02 | 2024-05-02 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-09-19 | 2024-09-19 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org.au | |||
| 2024-09-19 | 2024-09-19 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-09-12 | 2024-09-12 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-09-05 | 2024-09-05 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-08-29 | 2024-08-29 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-08-22 | 2024-08-22 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-08-15 | 2024-08-15 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-08-08 | 2024-08-08 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-08-01 | 2024-08-01 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-07-25 | 2024-07-25 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-07-18 | 2024-07-18 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-07-11 | 2024-07-11 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-07-04 | 2024-07-04 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-06-27 | 2024-06-27 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-06-20 | 2024-06-20 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-06-13 | 2024-06-13 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-06-06 | 2024-06-06 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-09-19 | 2024-09-19 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org.au | |||
| 2024-09-19 | 2024-09-19 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-09-12 | 2024-09-12 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-09-05 | 2024-09-05 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-08-29 | 2024-08-29 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-08-22 | 2024-08-22 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-08-15 | 2024-08-15 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-08-08 | 2024-08-08 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-08-01 | 2024-08-01 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-07-25 | 2024-07-25 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-07-18 | 2024-07-18 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-09-26 | 2024-09-26 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.eu | |||
| 2024-09-26 | 2024-09-26 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-09-26 | 2024-09-26 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org.au | |||
| 2022-12-01 | 2022-12-01 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.eu | |||
| 2022-12-01 | 2022-12-01 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2022-12-01 | 2022-12-01 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org.au | |||
| 2023-02-23 | 2023-02-23 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.eu | |||
| 2023-02-23 | 2023-02-23 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2023-02-23 | 2023-02-23 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org.au | |||
| 2023-09-07 | 2023-09-07 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.eu | |||
| 2023-09-07 | 2023-09-07 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2023-09-07 | 2023-09-07 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org.au | |||
| 2023-11-02 | 2023-11-02 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.eu | |||
| 2023-11-09 | 2023-11-09 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2023-11-13 | 2023-11-13 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org.au | |||
| 2023-11-02 | 2023-11-02 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.eu | |||
| 2023-11-09 | 2023-11-09 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2023-11-13 | 2023-11-13 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org.au | |||
| 2023-11-30 | 2023-11-30 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.eu | |||
| 2023-11-30 | 2023-11-30 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2023-12-07 | 2023-12-07 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org.au | |||
| 2023-11-30 | 2023-11-30 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org.au | |||
| 2024-03-21 | 2024-03-21 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.eu | |||
| 2024-03-28 | 2024-03-28 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org.au | |||
| 2024-03-28 | 2024-03-28 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.eu | |||
| 2024-04-11 | 2024-04-11 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-09-12 | 2024-09-12 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-09-05 | 2024-09-05 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-08-29 | 2024-08-29 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-08-22 | 2024-08-22 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-08-15 | 2024-08-15 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-08-08 | 2024-08-08 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-08-01 | 2024-08-01 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-07-25 | 2024-07-25 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-07-18 | 2024-07-18 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-07-11 | 2024-07-11 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-07-04 | 2024-07-04 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-06-27 | 2024-06-27 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-06-20 | 2024-06-20 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-06-13 | 2024-06-13 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-06-06 | 2024-06-06 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-05-30 | 2024-05-30 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-05-23 | 2024-05-23 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-05-16 | 2024-05-16 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-05-09 | 2024-05-09 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-05-02 | 2024-05-02 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-04-25 | 2024-04-25 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | https://usegalaxy.org | |||
| 2024-10-07 | 2024-10-07 | MIT | Formatting Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Validation Sequence trimming Peak calling Read pre-processing Sequencing quality control | CUTnRUN | WorkflowHub | |||
| 2018-06-19 | 2018-06-19 | https://usegalaxy.org.au | ||||||
| 2018-08-01 | 2018-08-02 | Sequence read processing Phylogenetic analysis Taxonomic classification Visualisation Sequence clustering DNA barcoding Sequencing quality control | https://usegalaxy.eu | |||||
| 2021-01-15 | 2021-02-14 | Genome indexing Generation Read mapping Sequence alignment | https://usegalaxy.org.au | |||||
| 2023-08-14 | 2024-04-27 | Statistical calculation Sequence composition calculation Primer removal Variant calling Sequence trimming DNA barcoding Read pre-processing Sequencing quality control | https://usegalaxy.org | |||||
| 2024-03-14 | 2024-03-14 | MIT | Variant calling DNA barcoding | name:amplicon | https://usegalaxy.eu | |||
| 2024-03-14 | 2024-03-14 | MIT | Variant calling DNA barcoding | name:amplicon | https://usegalaxy.org | |||
| 2024-03-21 | 2024-03-21 | MIT | Variant calling DNA barcoding | name:amplicon | https://usegalaxy.org.au | |||
| 2024-09-19 | 2024-09-19 | MIT | Variant calling DNA barcoding | name:amplicon | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | MIT | Variant calling DNA barcoding | name:amplicon | https://usegalaxy.org | |||
| 2024-09-19 | 2024-09-19 | MIT | Variant calling DNA barcoding | name:amplicon | https://usegalaxy.org.au | |||
| 2022-01-11 | 2022-01-11 | Variant calling DNA barcoding | https://usegalaxy.eu | |||||
| 2024-05-30 | 2024-06-02 | MIT | Variant calling DNA barcoding | name:amplicon | WorkflowHub | |||
| 2023-03-16 | 2023-03-16 | Genome annotation Taxonomic classification Antimicrobial resistance prediction Gene prediction Coding region prediction Multilocus sequence typing | DAMG Nanopore ONT Genome Annotation | https://usegalaxy.org.au | ||||
| 2022-12-21 | 2023-03-16 | Taxonomic classification Base-calling Genome assembly De-novo assembly Multilocus sequence typing Filtering Coding region prediction Variant calling Genome annotation Antimicrobial resistance prediction Cross-assembly Mapping assembly Gene prediction Sequence assembly Sequencing quality control | DAMG Nanopore ONT Genome Assembly Annotation | https://usegalaxy.org.au | ||||
| 2023-03-22 | 2023-03-22 | Taxonomic classification Base-calling Genome assembly De-novo assembly Coding region prediction Variant calling Genome annotation Antimicrobial resistance prediction Cross-assembly Mapping assembly Gene prediction Sequence assembly Multilocus sequence typing | DAMG Nanopore ONT Genome Assembly Annotation | https://usegalaxy.org.au | ||||
| 2022-12-28 | 2022-12-28 | Statistical calculation Data handling RNA-Seq quantification Gene expression analysis Sequence composition calculation Primer removal Sequence annotation Sequence trimming RNA-Seq analysis Read pre-processing Sequencing quality control | https://usegalaxy.org | |||||
| 2022-01-04 | 2022-01-04 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2022-01-04 | 2022-01-04 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2024-01-01 | 2024-01-01 | CC-BY-4.0 | https://usegalaxy.eu | |||||
| 2021-11-08 | 2023-01-30 | Apache-2.0 | Sequence assembly | Validation Statistical calculation Scatter plot plotting Box-Whisker plot plotting Sequence composition calculation Sequencing quality control | Large-genome-assembly | WorkflowHub | ||
| 2021-05-26 | 2021-11-09 | Validation Statistical calculation Scatter plot plotting Box-Whisker plot plotting Sequence composition calculation Sequencing quality control | LG-WF | https://usegalaxy.org.au | ||||
| 2024-06-26 | 2024-07-03 | Validation Statistical calculation Sequence trimming Sequence composition calculation Read pre-processing Primer removal Sequencing quality control | https://usegalaxy.eu | |||||
| 2020-08-22 | 2020-09-03 | Filtering Formatting | https://usegalaxy.eu | |||||
| 2020-08-22 | 2020-09-01 | Filtering Formatting | https://usegalaxy.eu | |||||
| 2020-10-03 | 2020-11-24 | Filtering Formatting | https://usegalaxy.eu | |||||
| 2020-12-19 | 2021-05-04 | Filtering Formatting | https://usegalaxy.eu | |||||
| 2019-10-29 | 2019-10-29 | https://usegalaxy.eu | ||||||
| 2019-10-28 | 2019-10-28 | https://usegalaxy.eu | ||||||
| 2023-02-07 | 2023-02-08 | Sequence composition calculation RNA-Seq quantification Gene expression analysis | https://usegalaxy.eu | |||||
| 2023-02-07 | 2023-02-08 | https://usegalaxy.eu | ||||||
| 2023-02-08 | 2023-02-08 | Differential gene expression analysis | https://usegalaxy.eu | |||||
| 2022-03-18 | 2022-03-18 | MIT | https://usegalaxy.eu | |||||
| 2022-11-10 | 2022-11-10 | MIT | https://usegalaxy.org | |||||
| 2023-11-13 | 2023-11-13 | MIT | https://usegalaxy.eu | |||||
| 2023-11-13 | 2023-11-13 | MIT | https://usegalaxy.org | |||||
| 2023-11-30 | 2023-11-30 | MIT | https://usegalaxy.eu | |||||
| 2023-11-30 | 2023-11-30 | MIT | https://usegalaxy.org | |||||
| 2024-05-20 | 2024-05-20 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2023-06-29 | 2024-09-23 | Sequence alignment analysis Read mapping Coding region prediction Aggregation Genome annotation Sequence assembly Sequence assembly visualisation Sequence assembly validation Sequencing quality control Taxonomic classification Data handling Genome assembly Genome indexing Optimisation and refinement Sequence contamination filtering Visualisation Gene prediction Generation Sequence alignment | Illumina denovo RNASeq DNASeq | https://usegalaxy.eu | ||||
| 2022-12-14 | 2022-12-14 | CC-BY-4.0 | Default-SDR | WorkflowHub | ||||
| 2021-11-26 | 2023-01-16 | Apache-2.0 | Segmentation | WorkflowHub | ||||
| 2019-01-17 | 2019-01-17 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Sequence annotation Differential gene expression analysis RNA-Seq analysis Transcriptome assembly Read summarisation Sequencing quality control | RNA RNA-seq assembly | https://usegalaxy.eu | ||||
| 2021-03-19 | 2021-03-19 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Sequence annotation Differential gene expression analysis RNA-Seq analysis Transcriptome assembly Read summarisation Sequencing quality control | transcriptomics galaxy-training-network | https://usegalaxy.org.au | ||||
| 2021-03-14 | 2021-04-01 | Statistical calculation RNA-Seq quantification Gene expression analysis Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Sequencing quality control | transcriptomics mirna arabidopsis | https://usegalaxy.eu | ||||
| 2021-05-06 | 2021-05-06 | Differential gene expression analysis Statistical calculation RNA-Seq analysis RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2020-04-07 | 2020-04-07 | Sequence assembly Optimisation and refinement Genome assembly | assembly galaxy-training-network | https://usegalaxy.org.au | ||||
| 2020-05-19 | 2020-05-19 | https://usegalaxy.eu | ||||||
| 2019-05-14 | 2020-05-19 | https://usegalaxy.eu | ||||||
| 2019-05-14 | 2020-05-19 | https://usegalaxy.eu | ||||||
| 2022-12-22 | 2023-02-02 | BSD-3-Clause | Taxonomic classification Data handling | VGP_curated | https://usegalaxy.eu | |||
| 2021-06-07 | 2021-06-09 | Sequence alignment analysis Local alignment Global alignment Sequence analysis DNA mapping Sequence alignment Genetic variation analysis | https://usegalaxy.eu | |||||
| 2022-11-24 | 2022-11-24 | GPL-3.0-or-later | Annotation | name:training name:transcriptomics name:deconvolution name:single-cell | https://usegalaxy.eu | |||
| 2022-11-25 | 2022-11-25 | https://usegalaxy.eu | ||||||
| 2022-11-26 | 2022-11-27 | Visualisation | https://usegalaxy.eu | |||||
| 2022-10-21 | 2022-10-24 | https://usegalaxy.eu | ||||||
| 2013-08-08 | 2013-08-09 | https://usegalaxy.eu | ||||||
| 2013-08-08 | 2013-08-09 | bam reads deepTools profile summaryPlot log2ratio | https://usegalaxy.eu | |||||
| 2021-03-19 | 2021-03-19 | Differential gene expression analysis RNA-Seq analysis Pathway or network analysis Pathway or network visualisation Gene functional annotation | transcriptomics galaxy-training-network | https://usegalaxy.org.au | ||||
| 2015-10-09 | 2015-10-09 | https://usegalaxy.org | ||||||
| 2015-10-09 | 2015-10-09 | https://usegalaxy.org | ||||||
| 2021-08-16 | 2021-08-17 | https://usegalaxy.org | ||||||
| 2015-10-09 | 2015-10-09 | https://usegalaxy.org | ||||||
| 2024-04-02 | 2024-04-02 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2012-03-13 | 2012-03-13 | ID mapping Phylogenetic tree visualisation Database search | https://usegalaxy.org | |||||
| 2012-01-25 | 2012-01-25 | ID mapping Phylogenetic tree visualisation Database search | https://usegalaxy.org | |||||
| 2010-07-05 | 2010-07-10 | https://usegalaxy.org | ||||||
| 2010-07-05 | 2010-07-10 | https://usegalaxy.org | ||||||
| 2013-06-13 | 2015-11-16 | https://usegalaxy.org | ||||||
| 2024-08-07 | 2024-08-12 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2020-01-16 | 2020-01-16 | Statistical calculation Formatting Data handling Sequence alignment analysis Sequence composition calculation Read mapping Variant calling Sequencing quality control | https://usegalaxy.org | |||||
| 2023-11-23 | 2023-11-24 | Differential gene expression analysis RNA-Seq analysis | https://usegalaxy.org | |||||
| 2019-02-01 | 2019-08-09 | Differential gene expression analysis RNA-Seq analysis | https://usegalaxy.org | |||||
| 2023-11-09 | 2023-12-07 | Differential gene expression analysis RNA-Seq analysis | https://usegalaxy.org | |||||
| 2016-09-13 | 2016-09-17 | asbmr2016 | https://usegalaxy.org | |||||
| 2024-07-09 | 2024-07-09 | Differential gene expression analysis RNA-Seq analysis | https://usegalaxy.org | |||||
| 2024-07-06 | 2024-10-16 | Filtering Visualisation Statistical calculation Standardisation and normalisation | https://usegalaxy.eu | |||||
| 2021-02-25 | 2021-02-25 | Peak detection Mass spectrum visualisation Chromatogram visualisation Validation Chromatographic alignment Filtering Label-free quantification | https://usegalaxy.fr | |||||
| 2016-03-04 | 2016-03-29 | Read mapping | https://usegalaxy.org | |||||
| 2022-06-01 | 2022-06-04 | Genome annotation Visualisation Coding region prediction Genome assembly Gene prediction Aggregation Sequence assembly validation | https://usegalaxy.org.au | |||||
| 2024-02-10 | 2024-02-17 | Validation Statistical calculation Genome visualisation RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2014-02-12 | 2014-02-23 | nascent RNA | https://usegalaxy.org | |||||
| 2020-05-13 | 2020-05-13 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2020-12-17 | 2020-12-17 | Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Primer removal | miRNA MiRDeep2 Arabidopsis differential-expression | https://usegalaxy.eu | ||||
| 2021-06-12 | 2021-06-21 | GPL-3.0-or-later | Statistical calculation Sequence composition calculation Gene-set enrichment analysis Primer removal Differential gene expression analysis RNA-Seq analysis Transcriptome assembly Sequence trimming Read pre-processing Sequence alignment Sequencing quality control | rna-seq rnaseq differential expression yeast deseq2 differential-expression enrichment goenrichment rna qualimap fastqc volcano volcanoplot trimgalore trim stringtie rnastar star mapping quality | https://usegalaxy.eu | |||
| 2020-05-14 | 2020-05-15 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2023-11-08 | 2023-11-13 | Differential gene expression analysis Statistical calculation RNA-Seq analysis RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | DESeq2 Differential FastQC HISAT2 RNAseq expression featureCounts multiple | https://usegalaxy.org | ||||
| 2024-08-02 | 2024-08-02 | CC-BY-4.0 | WorkflowHub | |||||
| 2024-06-19 | 2024-08-08 | epigenetics scATAC-seq name:single-cell | https://usegalaxy.eu | |||||
| 2017-09-28 | 2017-09-28 | Differential gene expression analysis RNA-Seq analysis | https://usegalaxy.org | |||||
| 2024-08-17 | 2024-09-22 | https://usegalaxy.eu | ||||||
| 2024-08-17 | 2024-10-02 | MIT | Pairwise sequence alignment Structure visualisation Sequence analysis Genome visualisation Pathway visualisation Structural variation detection | https://usegalaxy.eu | ||||
| 2022-08-19 | 2022-08-21 | Visualisation | https://usegalaxy.eu | |||||
| 2020-04-17 | 2020-08-31 | Variant calling Sequence analysis Statistical calculation Genetic variation analysis | variant-analysis galaxy-training-network | https://usegalaxy.org.au | ||||
| 2022-07-08 | 2023-01-16 | CC-BY-4.0 | Default-SDR collections multi-specimen-input validated-2022-06-29 | WorkflowHub | ||||
| 2020-05-07 | 2020-05-08 | https://usegalaxy.eu | ||||||
| 2020-05-03 | 2020-05-05 | https://usegalaxy.org | ||||||
| 2020-06-09 | 2020-06-11 | COVID-19 covid19.galaxyproject.org | https://usegalaxy.eu | |||||
| 2021-11-01 | 2021-11-01 | Multilocus sequence typing | https://usegalaxy.org | |||||
| 2019-06-12 | 2019-06-12 | Validation Statistical calculation Sequence composition calculation Sequencing quality control | bigdata downsample memoryfailures fastq | https://usegalaxy.org | ||||
| 2020-03-04 | 2020-12-11 | Differential gene expression analysis RNA-Seq analysis | https://usegalaxy.eu | |||||
| 2022-04-08 | 2022-06-10 | Differential gene expression analysis | https://usegalaxy.eu | |||||
| 2022-05-09 | 2022-05-16 | https://usegalaxy.eu | ||||||
| 2024-04-09 | 2024-04-11 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2018-07-21 | 2018-07-22 | https://usegalaxy.org | ||||||
| 2018-07-21 | 2018-07-24 | Variant calling Statistical calculation Genome indexing Generation Read mapping Sequence alignment | https://usegalaxy.org | |||||
| 2023-05-02 | 2023-05-03 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2016-01-21 | 2016-06-08 | Formatting Genome indexing Read mapping Generation Sequence alignment | https://usegalaxy.org | |||||
| 2010-05-20 | 2010-06-11 | https://usegalaxy.org | ||||||
| 2022-11-28 | 2023-01-10 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2012-12-14 | 2012-12-17 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org | |||||
| 2024-01-24 | 2024-02-15 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.eu | |||||
| 2024-02-10 | 2024-02-17 | Mapping | https://usegalaxy.eu | |||||
| 2024-02-10 | 2024-02-10 | RNA-Seq analysis Gene-set enrichment analysis Gene functional annotation | https://usegalaxy.eu | |||||
| 2024-02-11 | 2024-02-17 | Gene set testing RNA-Seq analysis Gene-set enrichment analysis Gene functional annotation | https://usegalaxy.eu | |||||
| 2023-05-17 | 2023-05-17 | Statistical calculation Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org | |||||
| 2018-01-17 | 2018-01-17 | Sequence database search Formatting Sequence profile generation Statistical calculation Phylogenetic analysis Format validation Sequence motif recognition Data retrieval Sequencing quality control Protein feature detection Taxonomic classification Demultiplexing Database search Gene prediction Visualisation Conversion Probabilistic sequence generation Sequence generation Multiple sequence alignment | ASaiM | https://usegalaxy.eu | ||||
| 2020-05-15 | 2020-05-15 | https://usegalaxy.eu | ||||||
| 2020-06-15 | 2020-09-30 | https://usegalaxy.eu | ||||||
| 2021-03-12 | 2021-03-15 | https://usegalaxy.eu | ||||||
| 2023-02-17 | 2023-02-17 | https://usegalaxy.eu | ||||||
| 2022-04-27 | 2022-04-27 | https://usegalaxy.eu | ||||||
| 2023-12-14 | 2023-12-14 | CC-BY-4.0 | https://usegalaxy.eu | |||||
| 2023-10-21 | 2023-10-21 | CC-BY-4.0 | https://usegalaxy.eu | |||||
| 2019-07-04 | 2020-01-09 | https://usegalaxy.eu | ||||||
| 2020-05-29 | 2020-05-29 | https://usegalaxy.eu | ||||||
| 2019-06-27 | 2019-07-10 | https://usegalaxy.eu | ||||||
| 2020-06-12 | 2020-07-14 | Sequence composition calculation RNA-Seq quantification Gene expression analysis | https://usegalaxy.eu | |||||
| 2020-05-29 | 2020-05-29 | Sequence composition calculation RNA-Seq quantification Gene expression analysis | https://usegalaxy.eu | |||||
| 2020-05-29 | 2020-05-29 | Differential gene expression analysis | https://usegalaxy.eu | |||||
| 2024-10-17 | 2024-10-17 | MIT | Structure visualisation Genome visualisation Pathway visualisation | https://usegalaxy.org | ||||
| 2024-10-14 | 2024-10-17 | MIT | Structure visualisation Genome visualisation Pathway visualisation | https://usegalaxy.org | ||||
| 2023-12-14 | 2023-12-14 | Mapping Read mapping Sequence alignment | assembly name:microGalaxy | https://usegalaxy.eu | ||||
| 2020-04-07 | 2020-04-07 | Mapping Read mapping Sequence alignment | assembly galaxy-training-network | https://usegalaxy.org.au | ||||
| 2019-06-22 | 2019-06-22 | name:Ecology name:GBIF name:OccurencesData name:MapVisualization | https://usegalaxy.eu | |||||
| 2023-11-09 | 2023-11-09 | CC-BY-4.0 | Biodiversity Ecology | WorkflowHub | ||||
| 2023-10-19 | 2023-11-09 | https://usegalaxy.eu | ||||||
| 2024-07-09 | 2024-07-17 | Differential gene expression analysis | https://usegalaxy.org | |||||
| 2012-11-24 | 2012-11-26 | https://usegalaxy.org | ||||||
| 2012-09-24 | 2012-11-28 | https://usegalaxy.org | ||||||
| 2023-03-12 | 2023-03-12 | Sequence contamination filtering Sequence trimming Sequence alignment analysis Read pre-processing Primer removal Sequencing quality control | https://usegalaxy.eu | |||||
| 2017-07-16 | 2017-12-11 | https://usegalaxy.org | ||||||
| 2024-10-09 | 2024-10-09 | https://usegalaxy.org | ||||||
| 2024-10-01 | 2024-10-10 | https://usegalaxy.org | ||||||
| 2019-05-14 | 2020-05-19 | https://usegalaxy.eu | ||||||
| 2019-05-14 | 2020-05-19 | https://usegalaxy.eu | ||||||
| 2020-09-16 | 2020-09-24 | Peak detection Mass spectrum visualisation Chromatogram visualisation Validation Chromatographic alignment Filtering Label-free quantification | Biomarkers ElectrosprayIonization Ionsuppression Matrixeffect Meta-metabolomics LiquidChromatography-MassSpectrometry | https://usegalaxy.fr | ||||
| 2022-12-06 | 2022-12-06 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Sequence trimming Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2019-01-18 | 2019-08-09 | https://usegalaxy.eu | ||||||
| 2024-10-11 | 2024-10-11 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.eu | |||||
| 2024-01-29 | 2024-02-04 | https://usegalaxy.eu | ||||||
| 2024-08-21 | 2024-08-21 | https://usegalaxy.eu | ||||||
| 2020-10-13 | 2021-01-15 | Filtering Formatting | https://usegalaxy.eu | |||||
| 2021-01-15 | 2021-08-31 | https://usegalaxy.eu | ||||||
| 2020-09-24 | 2020-10-02 | Filtering Formatting | https://usegalaxy.eu | |||||
| 2024-08-05 | 2024-10-04 | MIT | Exposomics GC-MS Metabolomics QCxMS | WorkflowHub | ||||
| 2024-08-05 | 2024-08-12 | MIT | Exposomics QCxMS GC-MS Metabolomics | https://usegalaxy.eu | ||||
| 2024-05-17 | 2024-06-06 | MIT | Exposomics QCxMS GC-MS Metabolomics | https://usegalaxy.eu | ||||
| 2024-05-15 | 2024-05-15 | Statistical calculation Genome assembly Sequence composition calculation Scaffolding Transcriptome assembly Sequence assembly validation Sequencing quality control | https://usegalaxy.org | |||||
| 2024-09-18 | 2024-09-18 | MIT | Whole genome sequencing | Statistical calculation Sequence conversion Sequence composition calculation Primer removal Validation Sequence trimming DNA transcription Read pre-processing DNA translation Sequencing quality control | DataQC ERGA HiFi | WorkflowHub | ||
| 2024-09-18 | 2024-09-18 | MIT | Whole genome sequencing | Statistical calculation Sequence conversion Sequence composition calculation Validation Sequence contamination filtering Sequence trimming DNA transcription DNA translation Sequencing quality control | DataQC ERGA illumina | WorkflowHub | ||
| 2024-01-08 | 2024-01-08 | MIT | Whole genome sequencing | Sequence trimming Sequence conversion DNA transcription Box-Whisker plot plotting DNA translation Scatter plot plotting | DataQC ERGA ONT | WorkflowHub | ||
| 2024-01-09 | 2024-01-09 | MIT | Whole genome sequencing | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Transcriptome assembly Sequence alignment Sequence assembly validation | ERGA HiC name:ASSEMBLY+QC | WorkflowHub | ||
| 2023-10-11 | 2024-03-13 | MIT | Whole genome sequencing | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Transcriptome assembly Sequence alignment Sequence assembly validation | Assembly+QC ERGA Hi-C | WorkflowHub | ||
| 2024-09-24 | 2024-09-24 | MIT | Whole genome sequencing | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Transcriptome assembly Sequence alignment Sequence assembly validation | Assembly ERGA HiC QC | WorkflowHub | ||
| 2024-01-02 | 2024-03-13 | MIT | Whole genome sequencing | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Read binning Pairwise sequence alignment Transcriptome assembly Sequence assembly validation | Assembly+QC ERGA HiFi | WorkflowHub | ||
| 2024-09-24 | 2024-09-24 | MIT | Whole genome sequencing | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Read binning Pairwise sequence alignment Transcriptome assembly Sequence assembly validation | Assembly ERGA HiFi QC | WorkflowHub | ||
| 2023-10-09 | 2024-03-13 | MIT | Whole genome sequencing | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Transcriptome assembly Sequence assembly visualisation Sequence assembly validation | Assembly+QC ERGA Hi-C HiFi | WorkflowHub | ||
| 2024-09-24 | 2024-09-24 | MIT | Whole genome sequencing | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Transcriptome assembly Sequence assembly visualisation Sequence assembly validation | Assembly ERGA HiFi QC | WorkflowHub | ||
| 2024-03-11 | 2024-03-11 | MIT | Whole genome sequencing | Phasing k-mer counting Data handling Genome assembly De-novo assembly Optimisation and refinement Scaffolding Pairwise sequence alignment Transcriptome assembly Cross-assembly Mapping assembly Sequence assembly visualisation Sequence alignment Sequence assembly validation | name:ASSEMBLY+QC name:ERGA name:ILLUMINA name:ONT | WorkflowHub | ||
| 2024-03-11 | 2024-03-11 | MIT | Whole genome sequencing | Phasing k-mer counting Data handling Genome assembly De-novo assembly Optimisation and refinement Scaffolding Pairwise sequence alignment Transcriptome assembly Sequence assembly visualisation Sequence alignment Sequence assembly validation | name:ASSEMBLY+QC name:ERGA name:ILLUMINA name:ONT | WorkflowHub | ||
| 2024-01-09 | 2024-01-09 | MIT | Whole genome sequencing | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Read binning Pairwise sequence alignment Transcriptome assembly Sequence assembly validation | ERGA illumina name:ASSEMBLY+QC | WorkflowHub | ||
| 2024-09-18 | 2024-09-18 | MIT | Whole genome sequencing | Sequence trimming k-mer counting Genotyping | ERGA HiFi Profiling | WorkflowHub | ||
| 2024-01-08 | 2024-01-08 | MIT | Whole genome sequencing | Sequence trimming k-mer counting Genotyping | ERGA illumina name:PROFILING | WorkflowHub | ||
| 2024-08-09 | 2024-08-26 | MIT | Genomics | Data handling Genome assembly Scaffolding Genome annotation Transcriptome assembly Differential protein expression profiling Sequence assembly validation | Annotation ERGA Genomics QC | WorkflowHub | ||
| 2024-08-20 | 2024-08-20 | MIT | Genomics | Sequence database search Sequence alignment analysis De-novo assembly Primer removal Pairwise sequence alignment Sequence assembly validation Sequencing quality control Phasing k-mer counting Data handling Genome assembly Mapping Scaffolding Sequence contamination filtering Sequence trimming Transcriptome assembly Data retrieval Read pre-processing Sequence alignment Genotyping | Genome assembly Genomics QC | WorkflowHub | ||
| 2024-08-19 | 2024-08-20 | MIT | Genomics | Sequence database search Sequence alignment analysis De-novo assembly Sequence assembly validation Sequencing quality control Phasing k-mer counting Data handling Genome assembly Mapping Scaffolding Sequence contamination filtering Sequence trimming Transcriptome assembly Data retrieval Sequence alignment Genotyping | Genome assembly Genomics QC | WorkflowHub | ||
| 2022-03-20 | 2022-03-21 | Statistical calculation Data handling RNA-Seq quantification Gene expression analysis Sequence composition calculation Primer removal Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Sequencing quality control | https://usegalaxy.org | |||||
| 2020-12-01 | 2020-12-01 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org | |||||
| 2020-12-01 | 2020-12-01 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org | |||||
| 2020-12-01 | 2020-12-01 | Formatting Statistical calculation Data handling Sequence alignment analysis Genome indexing Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2022-01-19 | 2022-02-03 | Statistical calculation Formatting Genome alignment Sequence composition calculation Variant calling Validation Pairwise sequence alignment Copy number estimation Sequencing quality control | https://usegalaxy.eu | |||||
| 2024-10-15 | 2024-10-15 | CC-BY-4.0 | Biodiversity Ecology | Evaluation IA | WorkflowHub | |||
| 2020-05-04 | 2020-05-04 | Statistical calculation Phylogenetic analysis Sequence analysis Multiple sequence alignment | https://usegalaxy.org | |||||
| 2024-01-13 | 2024-01-13 | Validation Statistical calculation Sequence composition calculation Read mapping Sequencing quality control | https://usegalaxy.org | |||||
| 2016-09-20 | 2020-06-18 | https://usegalaxy.org | ||||||
| 2023-07-07 | 2023-07-08 | Variant calling Statistical calculation Read mapping | https://usegalaxy.eu | |||||
| 2024-02-21 | 2024-03-01 | CC-BY-4.0 | astronomy | WorkflowHub | ||||
| 2023-06-07 | 2023-12-08 | Sequence alignment RNA-Seq quantification Genome indexing Mapping Read mapping Enrichment analysis Gene regulatory network analysis Differential gene expression analysis Peak calling Generation Read summarisation | https://usegalaxy.eu | |||||
| 2017-02-28 | 2017-02-28 | Statistical calculation Sequence trimming Sequence composition calculation Read pre-processing Primer removal Sequencing quality control | https://usegalaxy.org | |||||
| 2022-05-23 | 2023-02-27 | Statistical calculation Genome indexing Sequence composition calculation Read mapping Primer removal Sequence trimming Generation Read pre-processing Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2014-03-17 | 2014-03-17 | Exome exome exome workflow | https://usegalaxy.org | |||||
| 2014-09-25 | 2014-09-25 | Formatting Genome indexing Generation Read mapping Sequence alignment | https://usegalaxy.eu | |||||
| 2020-04-17 | 2020-08-31 | Statistical calculation Genome indexing Sequence composition calculation Read mapping Validation Variant calling Sequence analysis Generation Sequence alignment Genetic variation analysis Sequencing quality control | variant-analysis galaxy-training-network | https://usegalaxy.org.au | ||||
| 2020-04-17 | 2020-08-31 | Variant calling Sequence analysis Statistical calculation Genetic variation analysis | variant-analysis galaxy-training-network | https://usegalaxy.org.au | ||||
| 2019-09-21 | 2019-09-21 | Statistical calculation Genome indexing Sequence composition calculation Read mapping Validation Variant calling Sequence analysis Generation Sequence alignment Genetic variation analysis Sequencing quality control | variant-analysis training-material | https://usegalaxy.eu | ||||
| 2019-09-21 | 2019-09-21 | Variant calling Sequence analysis Statistical calculation Genetic variation analysis | variant-analysis training-material | https://usegalaxy.eu | ||||
| 2020-04-06 | 2020-04-06 | https://usegalaxy.org | ||||||
| 2021-01-15 | 2021-01-15 | https://usegalaxy.eu | ||||||
| 2021-01-24 | 2021-01-24 | https://usegalaxy.eu | ||||||
| 2020-12-11 | 2020-12-11 | https://usegalaxy.org | ||||||
| 2021-01-16 | 2021-01-20 | https://usegalaxy.eu | ||||||
| 2015-07-18 | 2015-07-18 | https://usegalaxy.org | ||||||
| 2018-02-19 | 2018-02-19 | https://usegalaxy.org | ||||||
| 2022-03-31 | 2022-03-31 | https://usegalaxy.eu | ||||||
| 2019-12-03 | 2019-12-03 | Differential gene expression analysis | https://usegalaxy.eu | |||||
| 2023-03-22 | 2023-03-24 | Visualisation | https://usegalaxy.org | |||||
| 2024-04-07 | 2024-04-07 | Visualisation | https://usegalaxy.eu | |||||
| 2023-03-16 | 2023-09-01 | Visualisation | https://usegalaxy.eu | |||||
| 2022-08-21 | 2022-08-21 | Visualisation | https://usegalaxy.eu | |||||
| 2022-04-08 | 2022-04-08 | Visualisation | https://usegalaxy.eu | |||||
| 2021-04-25 | 2021-04-25 | Visualisation | https://usegalaxy.eu | |||||
| 2023-03-22 | 2023-03-22 | Visualisation | https://usegalaxy.org | |||||
| 2022-04-25 | 2022-04-25 | Visualisation | name:iris name:Groups Scatterplot | https://usegalaxy.org | ||||
| 2021-10-11 | 2021-10-11 | Visualisation | https://usegalaxy.org | |||||
| 2021-10-20 | 2021-11-03 | Visualisation | name:test | https://usegalaxy.org | ||||
| 2022-04-01 | 2022-04-02 | Visualisation | https://usegalaxy.org | |||||
| 2022-08-19 | 2022-08-21 | Visualisation | name | https://usegalaxy.eu | ||||
| 2022-08-18 | 2022-08-18 | Visualisation | https://usegalaxy.org.au | |||||
| 2021-10-19 | 2021-10-22 | Visualisation | name:suhasini | https://usegalaxy.org | ||||
| 2023-03-22 | 2023-03-27 | Visualisation | https://usegalaxy.org | |||||
| 2023-02-10 | 2023-02-10 | CC-BY-4.0 | Data handling Genome assembly | WorkflowHub | ||||
| 2024-05-08 | 2024-05-09 | GPL-3.0 | Scaffolding Transcriptome assembly de Novo sequencing Genome assembly De-novo assembly Sequence assembly validation Coding region prediction | TSI-annotation | WorkflowHub | |||
| 2019-05-14 | 2020-05-19 | https://usegalaxy.eu | ||||||
| 2019-05-14 | 2020-05-19 | https://usegalaxy.eu | ||||||
| 2020-05-19 | 2020-05-19 | https://usegalaxy.eu | ||||||
| 2019-05-14 | 2020-05-19 | https://usegalaxy.eu | ||||||
| 2019-05-14 | 2020-05-19 | https://usegalaxy.eu | ||||||
| 2020-05-19 | 2020-05-19 | https://usegalaxy.eu | ||||||
| 2024-01-13 | 2024-01-13 | Statistical calculation Genome indexing Sequence composition calculation Read mapping Validation Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2024-01-13 | 2024-01-13 | Validation Statistical calculation Sequence composition calculation Read mapping Sequencing quality control | https://usegalaxy.org | |||||
| 2011-05-18 | 2011-05-19 | https://usegalaxy.org | ||||||
| 2014-06-26 | 2014-06-26 | fasta reformat identifiers datasets | https://usegalaxy.org | |||||
| 2022-02-22 | 2022-03-04 | Sequence contamination filtering Sequencing quality control | galaxy-australia-workflows qc statistics | https://usegalaxy.org.au | ||||
| 2014-03-18 | 2014-03-19 | https://usegalaxy.org | ||||||
| 2021-02-04 | 2021-02-04 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.eu | |||||
| 2023-08-16 | 2023-08-16 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org | |||||
| 2017-03-24 | 2017-12-01 | Statistical calculation Peak calling Sequence composition calculation Read mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | https://usegalaxy.org | |||||
| 2016-01-26 | 2016-01-26 | Variant calling Formatting Statistical calculation Genome indexing Generation Read mapping Sequence alignment | https://usegalaxy.org | |||||
| 2021-01-18 | 2021-01-28 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.eu | |||||
| 2023-03-29 | 2023-03-29 | https://usegalaxy.eu | ||||||
| 2024-10-07 | 2024-10-07 | MIT | RNA-Seq quantification | #single-cell | WorkflowHub | |||
| 2016-09-12 | 2016-09-17 | Sequence alignment Nucleic acid sequence analysis | asbmr2016 | https://usegalaxy.org | ||||
| 2022-09-12 | 2022-09-12 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.eu | |||||
| 2021-03-19 | 2021-03-19 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.fr | |||||
| 2021-01-16 | 2021-01-20 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.eu | |||||
| 2022-08-12 | 2022-08-19 | MIT | Validation Statistical calculation Sequence composition calculation Sequencing quality control | https://usegalaxy.eu | ||||
| 2024-05-13 | 2024-05-17 | Validation Statistical calculation Sequence composition calculation Sequencing quality control | BGGM Microbiome Amplicon FASTQC QualityCheck | https://usegalaxy.eu | ||||
| 2018-04-23 | 2019-04-01 | Statistical calculation Data handling Sequence alignment analysis Genome indexing Sequence composition calculation Read mapping Primer removal Sequence trimming Generation Read pre-processing Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2015-01-29 | 2015-01-29 | https://usegalaxy.eu | ||||||
| 2022-08-23 | 2022-08-23 | Validation Statistical calculation Sequence trimming Sequence composition calculation Read pre-processing Primer removal Sequencing quality control | https://usegalaxy.eu | |||||
| 2022-02-11 | 2022-02-11 | https://usegalaxy.eu | ||||||
| 2019-04-03 | 2019-04-04 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2023-11-07 | 2023-11-07 | Visualisation Image annotation Data handling Image analysis | https://usegalaxy.eu | |||||
| 2019-01-28 | 2019-05-12 | Read summarisation RNA-Seq quantification | https://usegalaxy.org | |||||
| 2023-07-10 | 2023-07-10 | https://usegalaxy.org.au | ||||||
| 2024-07-02 | 2024-07-02 | Mapping | EEBG24 | https://usegalaxy.eu | ||||
| 2010-04-12 | 2010-05-09 | https://usegalaxy.org | ||||||
| 2024-06-18 | 2024-06-28 | AGPL-3.0-or-later | Statistical calculation Formatting Data handling Sequence composition calculation Mapping Read mapping Validation Sequence contamination filtering Sequence file editing Sequencing quality control | DNA NEBNext QualityAssessment | https://usegalaxy.org | |||
| 2024-06-28 | 2024-06-29 | AGPL-3.0-or-later | Statistical calculation Formatting Data handling Sequence composition calculation Mapping Read mapping Validation Sequence contamination filtering Sequence file editing Sequencing quality control | DNA NEBNext QualityAssessment | https://usegalaxy.org | |||
| 2024-06-18 | 2024-06-18 | GPL-3.0 | Scaffolding Transcriptome assembly Sequence assembly validation Genome assembly | TSI-annotation | WorkflowHub | |||
| 2020-11-19 | 2020-11-19 | https://usegalaxy.eu | ||||||
| 2021-12-09 | 2021-12-09 | https://usegalaxy.eu | ||||||
| 2021-12-12 | 2021-12-12 | https://usegalaxy.eu | ||||||
| 2023-10-13 | 2023-10-13 | CC-BY-4.0 | Differential gene expression analysis | name:training name:single-cell | https://usegalaxy.eu | |||
| 2021-06-21 | 2023-09-20 | Differential gene expression analysis | transcriptomics name:singlecell | https://usegalaxy.org | ||||
| 2023-06-09 | 2023-12-18 | CC-BY-4.0 | Differential gene expression analysis | transcriptomics | https://usegalaxy.eu | |||
| 2016-09-17 | 2016-09-18 | asbmr2016 | https://usegalaxy.org | |||||
| 2019-04-03 | 2019-04-03 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2023-05-03 | 2023-05-03 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2016-06-04 | 2016-06-05 | Multiple sequence alignment Sequence motif recognition Sequence cluster visualisation Sequence visualisation | https://usegalaxy.org | |||||
| 2023-08-31 | 2023-11-06 | Sequence read processing Phylogenetic analysis Taxonomic classification Phylogenetic tree generation Visualisation Sequence clustering Phylogenetic tree analysis DNA barcoding Phylogenetic tree reconstruction Sequencing quality control | metagenomics | https://usegalaxy.org | ||||
| 2024-04-03 | 2024-04-03 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2021-10-09 | 2021-10-09 | Mapping | Genome | https://usegalaxy.org | ||||
| 2023-11-21 | 2023-11-21 | Mapping | https://usegalaxy.eu | |||||
| 2022-08-16 | 2022-08-21 | Mapping | https://usegalaxy.eu | |||||
| 2019-10-27 | 2019-10-27 | https://usegalaxy.org | ||||||
| 2017-11-02 | 2017-11-09 | https://usegalaxy.org | ||||||
| 2019-11-21 | 2021-04-28 | https://usegalaxy.org | ||||||
| 2022-11-29 | 2022-11-29 | Mapping | https://usegalaxy.eu | |||||
| 2024-10-08 | 2024-10-08 | Mapping | https://usegalaxy.eu | |||||
| 2024-10-07 | 2024-10-07 | Mapping | https://usegalaxy.eu | |||||
| 2024-09-16 | 2024-09-16 | Mapping | https://usegalaxy.eu | |||||
| 2023-11-21 | 2023-11-21 | Mapping | https://usegalaxy.eu | |||||
| 2022-11-29 | 2022-11-29 | Mapping | https://usegalaxy.eu | |||||
| 2022-11-29 | 2022-11-29 | Mapping | https://usegalaxy.eu | |||||
| 2022-11-29 | 2022-11-29 | Mapping | https://usegalaxy.eu | |||||
| 2022-11-29 | 2022-11-29 | Mapping | https://usegalaxy.eu | |||||
| 2022-11-29 | 2022-11-29 | Mapping | https://usegalaxy.eu | |||||
| 2022-11-29 | 2022-11-29 | Mapping | https://usegalaxy.eu | |||||
| 2022-11-29 | 2022-11-29 | Mapping | https://usegalaxy.eu | |||||
| 2022-11-29 | 2022-11-29 | Mapping | https://usegalaxy.eu | |||||
| 2022-11-17 | 2022-11-17 | Mapping | https://usegalaxy.eu | |||||
| 2022-11-17 | 2022-11-17 | Mapping | https://usegalaxy.eu | |||||
| 2022-11-17 | 2022-11-17 | Mapping | https://usegalaxy.eu | |||||
| 2022-11-15 | 2022-11-15 | Mapping | https://usegalaxy.eu | |||||
| 2023-03-06 | 2023-03-06 | Mapping | https://usegalaxy.org | |||||
| 2022-11-30 | 2022-11-30 | Mapping | https://usegalaxy.org | |||||
| 2022-03-18 | 2022-05-20 | Mapping | https://usegalaxy.org | |||||
| 2021-10-18 | 2021-10-22 | Mapping | name:suhasini | https://usegalaxy.org | ||||
| 2021-03-15 | 2021-03-15 | https://usegalaxy.org | ||||||
| 2022-03-10 | 2022-03-10 | Mapping | https://usegalaxy.org.au | |||||
| 2022-02-20 | 2022-02-20 | Mapping | https://usegalaxy.org | |||||
| 2024-10-19 | 2024-10-19 | Mapping | https://usegalaxy.eu | |||||
| 2024-09-16 | 2024-09-16 | Mapping | https://usegalaxy.eu | |||||
| 2021-01-14 | 2021-02-04 | https://usegalaxy.eu | ||||||
| 2020-03-27 | 2020-03-27 | https://usegalaxy.eu | ||||||
| 2020-01-22 | 2020-01-22 | https://usegalaxy.eu | ||||||
| 2021-03-19 | 2021-03-19 | introduction galaxy-training-network | https://usegalaxy.org.au | |||||
| 2021-04-08 | 2021-04-08 | https://usegalaxy.org | ||||||
| 2020-01-15 | 2020-01-15 | https://usegalaxy.eu | ||||||
| 2022-11-29 | 2022-11-29 | Mapping | https://usegalaxy.eu | |||||
| 2014-03-22 | 2015-05-12 | https://usegalaxy.eu | ||||||
| 2022-11-29 | 2022-11-29 | Mapping | https://usegalaxy.eu | |||||
| 2024-03-31 | 2024-03-31 | Mapping | https://usegalaxy.org | |||||
| 2024-05-08 | 2024-05-09 | GPL-3.0 | RNA-Seq analysis Transcriptome assembly Sequence alignment | TSI-annotation | WorkflowHub | |||
| 2023-11-24 | 2023-11-24 | Mapping | https://usegalaxy.eu | |||||
| 2018-10-17 | 2018-11-30 | Formatting Genome indexing Generation Read mapping Sequence alignment | https://usegalaxy.org | |||||
| 2020-01-15 | 2020-01-15 | https://usegalaxy.eu | ||||||
| 2014-03-09 | 2015-03-17 | https://usegalaxy.eu | ||||||
| 2024-02-15 | 2024-02-15 | MIT | WorkflowHub | |||||
| 2020-12-21 | 2020-12-21 | Statistical calculation Data handling RNA-Seq quantification Gene expression analysis Sequence composition calculation Primer removal Sequence annotation Sequence trimming RNA-Seq analysis Read pre-processing Sequencing quality control | https://usegalaxy.org | |||||
| 2018-03-03 | 2018-03-03 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2020-11-30 | 2020-11-30 | Pairwise sequence alignment Mapping | https://usegalaxy.eu | |||||
| 2024-02-16 | 2024-03-02 | CC-BY-4.0 | dengue helicase molecular dynamics rna virus west nile zika | WorkflowHub | ||||
| 2022-11-04 | 2023-07-14 | MIT | https://usegalaxy.eu | |||||
| 2024-02-16 | 2024-03-02 | CC-BY-4.0 | NS3 dengue helicase molecular dynamics rna virus west nile zika | WorkflowHub | ||||
| 2022-11-04 | 2023-07-14 | MIT | https://usegalaxy.eu | |||||
| 2023-11-04 | 2023-11-04 | Sequence alignment Read summarisation Sequence annotation RNA-Seq quantification | https://usegalaxy.org | |||||
| 2023-10-01 | 2023-10-04 | Read summarisation Sequence alignment RNA-Seq quantification | https://usegalaxy.org | |||||
| 2024-08-31 | 2024-08-31 | Statistical calculation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2024-08-31 | 2024-08-31 | Validation Statistical calculation Sequence trimming Sequence composition calculation Read pre-processing Primer removal Sequencing quality control | https://usegalaxy.org.au | |||||
| 2022-10-14 | 2022-10-14 | Statistical calculation Data handling Sequence alignment analysis Genome indexing Sequence composition calculation Read mapping Variant calling Validation Generation Sequence alignment Sequencing quality control | https://usegalaxy.eu | |||||
| 2024-03-01 | 2024-03-06 | MIT | Visualisation Image annotation Data handling Image analysis | WorkflowHub | ||||
| 2024-03-18 | 2024-07-12 | https://usegalaxy.fr | ||||||
| 2023-12-14 | 2023-12-14 | Genome visualisation Base-calling Genome assembly De-novo assembly Coding region prediction Pairwise sequence alignment Variant calling Sequence analysis Genome annotation Scatter plot plotting Box-Whisker plot plotting Cross-assembly Mapping assembly Gene prediction Sequence assembly Sequence assembly visualisation Sequence visualisation | wmdi name:microGalaxy | https://usegalaxy.eu | ||||
| 2019-05-09 | 2019-05-10 | Genome indexing Generation Read mapping Sequence alignment | https://usegalaxy.org | |||||
| 2018-11-16 | 2019-09-24 | https://usegalaxy.org | ||||||
| 2018-10-08 | 2018-10-08 | https://usegalaxy.org | ||||||
| 2023-01-09 | 2023-01-09 | Mapping Read mapping Enrichment analysis Gene regulatory network analysis Validation Peak calling Differential binding analysis Sequencing quality control | name:NEuROD1 name:FOXG1 name:NEuROD1 name:ChIP-seq | https://usegalaxy.eu | ||||
| 2023-02-17 | 2024-06-29 | MIT | WorkflowHub | |||||
| 2022-06-25 | 2022-06-29 | https://usegalaxy.eu | ||||||
| 2020-03-24 | 2020-03-24 | Data handling Sequence annotation | https://usegalaxy.eu | |||||
| 2016-02-17 | 2016-02-17 | Variant calling Statistical calculation Formatting Sequence composition calculation Sequencing quality control | https://usegalaxy.org | |||||
| 2023-12-14 | 2023-12-14 | Antimicrobial resistance prediction | evolution name:microGalaxy | https://usegalaxy.eu | ||||
| 2022-01-26 | 2022-02-04 | Antimicrobial resistance prediction | https://usegalaxy.eu | |||||
| 2019-03-26 | 2019-03-27 | Statistical calculation Formatting Genome indexing Sequence composition calculation Read mapping Primer removal Validation Sequence trimming Generation Read pre-processing Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2018-11-30 | 2019-01-03 | Gene expression profiling | https://usegalaxy.org | |||||
| 2023-12-14 | 2023-12-14 | Phylogenetic tree visualisation Variant calling Phylogenetic tree generation | evolution name:microGalaxy | https://usegalaxy.eu | ||||
| 2022-01-26 | 2022-03-10 | Phylogenetic tree visualisation Variant calling Phylogenetic tree generation | https://usegalaxy.eu | |||||
| 2021-10-18 | 2021-10-18 | https://usegalaxy.org | ||||||
| 2024-01-09 | 2024-01-13 | https://usegalaxy.org | ||||||
| 2023-07-24 | 2023-07-27 | https://usegalaxy.eu | ||||||
| 2023-02-20 | 2023-02-20 | https://usegalaxy.eu | ||||||
| 2021-10-16 | 2021-10-22 | name:suhasini | https://usegalaxy.org | |||||
| 2021-03-11 | 2021-03-11 | https://usegalaxy.org | ||||||
| 2022-04-05 | 2022-04-05 | https://usegalaxy.org | ||||||
| 2018-04-16 | 2018-04-29 | Genome indexing Generation Read mapping Sequence alignment | https://usegalaxy.eu | |||||
| 2013-05-28 | 2013-05-28 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org | |||||
| 2013-05-28 | 2013-05-28 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org | |||||
| 2023-12-14 | 2023-12-14 | evolution name:microGalaxy | https://usegalaxy.eu | |||||
| 2022-01-14 | 2022-02-04 | https://usegalaxy.eu | ||||||
| 2024-08-31 | 2024-08-31 | Box-Whisker plot plotting Scatter plot plotting | https://usegalaxy.org.au | |||||
| 2024-08-31 | 2024-08-31 | Statistical calculation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2024-08-31 | 2024-08-31 | Validation Statistical calculation Sequence trimming Sequence composition calculation Read pre-processing Primer removal Sequencing quality control | https://usegalaxy.org.au | |||||
| 2024-08-31 | 2024-08-31 | Validation Statistical calculation Sequence trimming Sequence composition calculation Read pre-processing Primer removal Sequencing quality control | https://usegalaxy.org.au | |||||
| 2024-08-31 | 2024-08-31 | Box-Whisker plot plotting Scatter plot plotting | https://usegalaxy.org.au | |||||
| 2024-08-31 | 2024-08-31 | Statistical calculation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2013-01-28 | 2013-03-15 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org | |||||
| 2024-09-02 | 2024-09-02 | CC-BY-4.0 | Earth-system Ocean pangeo | WorkflowHub | ||||
| 2024-03-29 | 2024-08-30 | CC-BY-4.0 | Ocean Pangeo earth-system | https://usegalaxy.eu | ||||
| 2021-07-17 | 2021-07-18 | Variant classification Methylation analysis Tree-based sequence alignment Variant calling | Emergen-Evaluation | https://usegalaxy.fr | ||||
| 2021-07-17 | 2021-07-18 | Variant classification Methylation analysis Tree-based sequence alignment Variant calling | Emergen-evaluation | https://usegalaxy.fr | ||||
| 2024-10-17 | 2024-10-17 | GPL-3.0-or-later | Fold recognition Genome visualisation Protein feature detection Information extraction Genome assembly Query and retrieval Sequence motif recognition Sequence annotation Homology-based gene prediction Scaffolding Genome annotation Transcriptome assembly Sequence alignment Sequence assembly validation | genome-annotation | https://usegalaxy.cz | |||
| 2024-02-15 | 2024-02-15 | Apache-2.0 | Fold recognition Genome annotation Protein feature detection Information extraction Query and retrieval Sequence motif recognition Homology-based gene prediction | genome-annotation | WorkflowHub | |||
| 2015-02-10 | 2015-03-22 | Sequence analysis Sequence alignment analysis Sequence alignment Local alignment Global alignment | https://usegalaxy.org | |||||
| 2011-06-07 | 2011-06-07 | Sequence analysis Sequence alignment analysis Sequence alignment Local alignment Global alignment | fuzznuc UCSC BED | https://usegalaxy.org | ||||
| 2018-11-07 | 2018-11-08 | https://usegalaxy.org | ||||||
| 2017-09-13 | 2017-09-14 | https://usegalaxy.org | ||||||
| 2022-06-28 | 2022-06-28 | Statistical calculation Formatting Sequence alignment analysis De-novo assembly Local alignment Sequence composition calculation Global alignment Primer removal Sequence contamination filtering Sequence trimming Sequence analysis Read pre-processing Sequence alignment Sequencing quality control | GA-virReport | https://usegalaxy.org.au | ||||
| 2022-06-28 | 2022-06-28 | Statistical calculation Formatting Sequence alignment analysis De-novo assembly Local alignment Sequence composition calculation Global alignment Primer removal Sequence contamination filtering Sequence trimming Sequence analysis Read pre-processing Sequence alignment Sequencing quality control | GA-virReport | https://usegalaxy.org.au | ||||
| 2022-06-28 | 2022-06-28 | Mapping Sequencing quality control | Ga-virReport-confidence | https://usegalaxy.org.au | ||||
| 2017-09-01 | 2017-09-01 | Genome indexing Generation Read mapping Sequence alignment | ChIP-seq subworkflow | https://usegalaxy.org | ||||
| 2017-09-01 | 2017-09-01 | Peak calling Enrichment analysis Gene regulatory network analysis | ChIP-seq | https://usegalaxy.org | ||||
| 2017-11-29 | 2017-11-29 | Peak calling Enrichment analysis Gene regulatory network analysis | ChIP-seq | https://usegalaxy.eu | ||||
| 2015-04-14 | 2015-04-15 | https://usegalaxy.org | ||||||
| 2014-09-09 | 2014-09-11 | https://usegalaxy.org | ||||||
| 2011-07-21 | 2011-07-21 | https://usegalaxy.org | ||||||
| 2022-11-24 | 2023-05-25 | Mapping | https://usegalaxy.fr | |||||
| 2021-10-16 | 2021-10-16 | Mapping | https://usegalaxy.org | |||||
| 2022-05-14 | 2022-05-14 | Mapping | https://usegalaxy.org | |||||
| 2022-05-20 | 2022-05-20 | Mapping | https://usegalaxy.org | |||||
| 2023-05-03 | 2023-05-03 | Apache-2.0 | WorkflowHub | |||||
| 2023-05-03 | 2023-05-03 | Apache-2.0 | WorkflowHub | |||||
| 2023-05-03 | 2023-05-03 | Apache-2.0 | WorkflowHub | |||||
| 2020-02-11 | 2022-09-30 | Statistical calculation Generation Genome indexing Sequence composition calculation Read mapping Sequence alignment Sequencing quality control | BCO HTS Testing New stuff | https://usegalaxy.org | ||||
| 2019-06-03 | 2019-06-12 | Sequence read processing Phylogenetic analysis Taxonomic classification Visualisation Sequence clustering DNA barcoding Sequencing quality control | https://usegalaxy.org.au | |||||
| 2023-05-03 | 2023-05-03 | Apache-2.0 | WorkflowHub | |||||
| 2024-09-03 | 2024-09-03 | Genome indexing Generation Read mapping Sequence alignment | epigenetics | https://usegalaxy.eu | ||||
| 2021-03-19 | 2021-03-19 | Sequence composition calculation Statistical calculation Sequencing quality control | introduction galaxy-training-network | https://usegalaxy.org.au | ||||
| 2021-03-19 | 2021-03-19 | introduction galaxy-training-network | https://usegalaxy.org.au | |||||
| 2021-03-19 | 2021-03-19 | introduction galaxy-training-network | https://usegalaxy.org.au | |||||
| 2021-03-19 | 2021-03-19 | introduction galaxy-training-network | https://usegalaxy.org.au | |||||
| 2023-08-11 | 2023-08-11 | Apache-2.0 | WorkflowHub | |||||
| 2024-03-05 | 2024-03-05 | Apache-2.0 | WorkflowHub | |||||
| 2016-06-05 | 2016-06-05 | Statistical calculation Formatting Data handling Sequence alignment analysis Genome indexing Sequence composition calculation Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2020-10-14 | 2020-10-19 | Statistical calculation RNA-Seq quantification Gene expression analysis Sequence composition calculation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2023-06-01 | 2023-06-01 | other-open | WorkflowHub | |||||
| 2023-08-11 | 2023-08-11 | Apache-2.0 | WorkflowHub | |||||
| 2023-05-03 | 2023-05-03 | Apache-2.0 | WorkflowHub | |||||
| 2023-05-03 | 2023-05-03 | Apache-2.0 | WorkflowHub | |||||
| 2023-05-03 | 2023-05-03 | Apache-2.0 | WorkflowHub | |||||
| 2018-04-08 | 2018-04-08 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org | |||||
| 2022-03-11 | 2023-01-16 | Apache-2.0 | copernicus earth observation ndvi sentinel-2 data | WorkflowHub | ||||
| 2015-07-17 | 2015-07-17 | https://usegalaxy.eu | ||||||
| 2022-08-12 | 2022-09-18 | Mapping | https://usegalaxy.eu | |||||
| 2016-11-06 | 2016-11-06 | Exons SNPs | https://usegalaxy.org | |||||
| 2015-09-24 | 2015-09-26 | https://usegalaxy.org | ||||||
| 2013-07-02 | 2014-01-21 | https://usegalaxy.org | ||||||
| 2011-09-02 | 2011-09-04 | https://usegalaxy.org | ||||||
| 2017-02-10 | 2017-02-10 | https://usegalaxy.org | ||||||
| 2016-07-25 | 2016-07-27 | Multiple sequence alignment | https://usegalaxy.org | |||||
| 2015-11-06 | 2015-11-06 | https://usegalaxy.org | ||||||
| 2015-10-28 | 2015-10-28 | kaffashow | https://usegalaxy.org | |||||
| 2016-03-30 | 2016-05-03 | https://usegalaxy.org | ||||||
| 2017-05-17 | 2017-05-18 | https://usegalaxy.org | ||||||
| 2012-06-20 | 2012-06-20 | https://usegalaxy.org | ||||||
| 2011-09-06 | 2011-10-24 | https://usegalaxy.org | ||||||
| 2020-05-17 | 2020-05-18 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2017-01-04 | 2017-01-11 | https://usegalaxy.org | ||||||
| 2020-11-12 | 2020-12-07 | https://usegalaxy.eu | ||||||
| 2020-11-12 | 2020-12-07 | https://usegalaxy.eu | ||||||
| 2024-01-22 | 2024-01-23 | Statistical calculation RNA-Seq quantification Sequence composition calculation Read mapping Read summarisation Sequencing quality control | https://usegalaxy.org | |||||
| 2016-04-25 | 2016-04-28 | Sequence composition calculation Statistical calculation Formatting Sequencing quality control | https://usegalaxy.org | |||||
| 2016-02-17 | 2016-02-17 | Sequence composition calculation Statistical calculation Formatting Sequencing quality control | https://usegalaxy.org | |||||
| 2020-12-15 | 2021-01-02 | Formatting Read mapping | https://usegalaxy.eu | |||||
| 2020-05-19 | 2020-05-19 | https://usegalaxy.eu | ||||||
| 2020-05-19 | 2020-05-19 | https://usegalaxy.eu | ||||||
| 2022-11-18 | 2023-11-09 | CC-BY-4.0 | WorkflowHub | |||||
| 2024-09-08 | 2024-09-08 | MIT | Peak detection Format validation Alignment Standardisation and normalisation Spectral library search Imputation Chromatographic alignment Clustering Quantification Feature extraction Filtering Correlation | Exposomics GC-MS Metabolomics LC-ESI-MS2viaDIA | https://usegalaxy.eu | |||
| 2023-03-22 | 2023-03-24 | MIT | Formatting Peak detection Format validation Mass spectrum visualisation Chromatogram visualisation Standardisation and normalisation Validation Spectral library search Imputation Chromatographic alignment Clustering Filtering Correlation Label-free quantification | GC-MS Metabolomics Expospomics | https://usegalaxy.fr | |||
| 2019-06-27 | 2019-06-27 | Formatting Genome assembly De-novo assembly Sequence assembly Sequence assembly visualisation Optimisation and refinement | https://usegalaxy.eu | |||||
| 2019-07-02 | 2019-07-02 | Gene prediction Genome annotation Genome visualisation Coding region prediction | https://usegalaxy.eu | |||||
| 2019-06-27 | 2019-06-27 | Statistical calculation Formatting De-novo assembly Sequence composition calculation Validation Visualisation Sequence assembly validation Sequencing quality control | https://usegalaxy.eu | |||||
| 2023-11-25 | 2024-06-13 | MIT | Peak detection Mass spectrum visualisation Chromatogram visualisation Validation Chromatographic alignment Filtering Label-free quantification | GC-MS GTN MS Metabolomics metaMS workflow4metabolomics | WorkflowHub | |||
| 2019-09-28 | 2019-09-28 | Statistical calculation Sequence composition calculation Sequence alignment Nucleic acid sequence analysis Sequencing quality control | https://usegalaxy.org | |||||
| 2014-09-26 | 2014-09-30 | https://usegalaxy.eu | ||||||
| 2021-05-06 | 2021-05-06 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org | |||||
| 2016-03-20 | 2016-03-21 | https://usegalaxy.org | ||||||
| 2023-04-13 | 2024-06-05 | MIT | Base-calling Genome assembly De-novo assembly Variant calling Antimicrobial resistance prediction Cross-assembly Mapping assembly Sequence assembly Sequence assembly visualisation | name:Collection name:PathoGFAIR name:IWC name:microGalaxy | https://usegalaxy.eu | |||
| 2024-06-25 | 2024-06-25 | MIT | Base-calling Genome assembly De-novo assembly Variant calling Antimicrobial resistance prediction Cross-assembly Mapping assembly Sequence assembly Sequence assembly visualisation | name:Collection name:PathoGFAIR name:IWC name:microGalaxy | https://usegalaxy.org | |||
| 2024-06-25 | 2024-06-25 | MIT | Base-calling Genome assembly De-novo assembly Variant calling Antimicrobial resistance prediction Cross-assembly Mapping assembly Sequence assembly Sequence assembly visualisation | name:Collection name:PathoGFAIR name:IWC name:microGalaxy | https://usegalaxy.org.au | |||
| 2024-09-19 | 2024-09-19 | MIT | Base-calling Genome assembly De-novo assembly Variant calling Antimicrobial resistance prediction Cross-assembly Mapping assembly Sequence assembly Sequence assembly visualisation | name:Collection name:PathoGFAIR name:IWC name:microGalaxy | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | MIT | Base-calling Genome assembly De-novo assembly Variant calling Antimicrobial resistance prediction Cross-assembly Mapping assembly Sequence assembly Sequence assembly visualisation | name:Collection name:PathoGFAIR name:IWC name:microGalaxy | https://usegalaxy.org | |||
| 2024-09-19 | 2024-09-19 | MIT | Base-calling Genome assembly De-novo assembly Variant calling Antimicrobial resistance prediction Cross-assembly Mapping assembly Sequence assembly Sequence assembly visualisation | name:Collection name:PathoGFAIR name:IWC name:microGalaxy | https://usegalaxy.org.au | |||
| 2024-06-26 | 2024-07-15 | MIT | Base-calling Genome assembly De-novo assembly Variant calling Antimicrobial resistance prediction Cross-assembly Mapping assembly Sequence assembly Sequence assembly visualisation | WorkflowHub | ||||
| 2022-03-20 | 2022-03-20 | Statistical calculation Data handling RNA-Seq quantification Gene expression analysis Sequence composition calculation Primer removal Sequence trimming RNA-Seq analysis Read pre-processing Sequencing quality control | https://usegalaxy.org | |||||
| 2024-09-19 | 2024-09-19 | Visualisation Data handling | https://usegalaxy.eu | |||||
| 2024-09-19 | 2024-09-19 | Visualisation Data handling | https://usegalaxy.org | |||||
| 2024-09-19 | 2024-09-19 | Visualisation Data handling | https://usegalaxy.org.au | |||||
| 2024-09-19 | 2024-09-19 | Visualisation Data handling | https://usegalaxy.eu | |||||
| 2024-09-19 | 2024-09-19 | Visualisation Data handling | https://usegalaxy.org | |||||
| 2024-09-19 | 2024-09-19 | Visualisation Data handling | https://usegalaxy.org.au | |||||
| 2024-03-03 | 2024-03-03 | CC-BY-4.0 | Sequence composition calculation RNA-Seq quantification Gene expression analysis | https://usegalaxy.eu | ||||
| 2023-04-21 | 2024-03-03 | CC-BY-4.0 | Sequence composition calculation RNA-Seq quantification Gene expression analysis | name:transcriptomics name:singlecell name:training | https://usegalaxy.eu | |||
| 2023-07-18 | 2023-07-18 | CC-BY-4.0 | Sequence composition calculation RNA-Seq quantification Gene expression analysis | name:transcriptomics name:singlecell name:training | https://usegalaxy.org | |||
| 2012-05-22 | 2012-07-27 | https://usegalaxy.org | ||||||
| 2020-06-21 | 2022-07-18 | Sequence contamination filtering Statistical calculation Genome assembly Sequence composition calculation Sequence assembly visualisation Sequencing quality control | Assembly Bacterial | https://usegalaxy.org.au | ||||
| 2022-06-03 | 2023-02-13 | CC-BY-4.0 | Genetic variation Virology | Mapping | generic mlxv | WorkflowHub | ||
| 2022-05-30 | 2022-06-03 | MIT | Mapping | mlxv generic | https://usegalaxy.org | |||
| 2022-06-06 | 2022-06-06 | MIT | Mapping | mlxv generic | https://usegalaxy.org.au | |||
| 2024-04-22 | 2024-05-05 | MIT | Visualisation Image annotation Data handling Image analysis | imageanaylsis nuclei Segmentation | https://usegalaxy.eu | |||
| 2023-11-30 | 2023-11-30 | MIT | Formatting Genome indexing Read mapping Validation Sequence contamination filtering Generation Sequence alignment Sequencing quality control | mpxv generic | https://usegalaxy.eu | |||
| 2023-11-30 | 2023-11-30 | MIT | Formatting Genome indexing Read mapping Validation Sequence contamination filtering Generation Sequence alignment Sequencing quality control | mpxv generic | https://usegalaxy.org | |||
| 2023-12-07 | 2023-12-07 | MIT | Formatting Genome indexing Read mapping Validation Sequence contamination filtering Generation Sequence alignment Sequencing quality control | mpxv generic | https://usegalaxy.org.au | |||
| 2023-11-30 | 2023-11-30 | MIT | Formatting Genome indexing Read mapping Validation Sequence contamination filtering Generation Sequence alignment Sequencing quality control | mpxv generic | https://usegalaxy.org.au | |||
| 2022-06-01 | 2023-02-13 | CC-BY-4.0 | Validation Sequence contamination filtering Formatting Genome indexing Generation Read mapping Sequence alignment Sequencing quality control | generic mpxv | WorkflowHub | |||
| 2024-05-29 | 2024-05-29 | MIT | Formatting Genome indexing Read mapping Validation Sequence contamination filtering Generation Sequence alignment Sequencing quality control | mpxv generic | https://usegalaxy.eu | |||
| 2024-05-29 | 2024-05-29 | MIT | Formatting Genome indexing Read mapping Validation Sequence contamination filtering Generation Sequence alignment Sequencing quality control | mpxv generic | https://usegalaxy.eu | |||
| 2022-05-24 | 2022-05-31 | MIT | Validation Sequence contamination filtering Formatting Genome indexing Generation Read mapping Sequence alignment Sequencing quality control | mpxv generic | https://usegalaxy.org | |||
| 2024-05-29 | 2024-05-29 | MIT | Formatting Genome indexing Read mapping Validation Sequence contamination filtering Generation Sequence alignment Sequencing quality control | mpxv generic | https://usegalaxy.org.au | |||
| 2022-06-06 | 2022-06-06 | MIT | Formatting Genome indexing Read mapping Validation Sequence contamination filtering Generation Sequence alignment Sequencing quality control | mpxv generic | https://usegalaxy.org.au | |||
| 2022-06-01 | 2023-01-16 | CC-BY-4.0 | Genetic variation Virology | generic mpvx | WorkflowHub | |||
| 2023-11-30 | 2023-11-30 | MIT | mpvx generic | https://usegalaxy.eu | ||||
| 2023-11-30 | 2023-11-30 | MIT | mpvx generic | https://usegalaxy.org | ||||
| 2023-12-07 | 2023-12-07 | MIT | mpvx generic | https://usegalaxy.org.au | ||||
| 2022-06-04 | 2024-10-18 | MIT | Formatting Genome indexing Read mapping Validation Sequence contamination filtering Generation Sequence alignment Sequencing quality control | generic mpxv | WorkflowHub | |||
| 2018-02-16 | 2018-06-26 | Phylogenetic analysis Sequence alignment analysis Phylogenetic inference (from molecular sequences) Local alignment Global alignment Phylogenetic tree visualisation Sequence analysis Sequence alignment | https://usegalaxy.eu | |||||
| 2020-05-29 | 2023-01-16 | MIT | Retrosynthesis genetic design pathway prediction | WorkflowHub | ||||
| 2022-05-30 | 2022-06-01 | MIT | mpvx generic | https://usegalaxy.org | ||||
| 2022-06-06 | 2022-06-06 | MIT | mpvx generic | https://usegalaxy.org.au | ||||
| 2023-10-12 | 2023-10-12 | Multiple sequence alignment | https://usegalaxy.fr | |||||
| 2024-03-13 | 2024-04-14 | Sequence database search Formatting Sequence profile generation Statistical calculation Format validation Database search Conversion Probabilistic sequence generation Sequence generation Multiple sequence alignment Data retrieval | gene family cds | https://usegalaxy.fr | ||||
| 2023-11-22 | 2023-11-22 | Sequence database search Formatting Sequence profile generation Statistical calculation Format validation Database search Conversion Probabilistic sequence generation Sequence generation Multiple sequence alignment Data retrieval | gene family polypeptide | https://usegalaxy.fr | ||||
| 2023-11-22 | 2023-11-22 | Sequence database search Formatting Sequence profile generation Statistical calculation Format validation Database search Conversion Probabilistic sequence generation Sequence generation Multiple sequence alignment Data retrieval | gene family polypeptide | https://usegalaxy.fr | ||||
| 2023-11-22 | 2023-11-22 | Sequence database search Formatting Sequence profile generation Statistical calculation Format validation Database search Conversion Probabilistic sequence generation Sequence generation Multiple sequence alignment Data retrieval | gene family cds | https://usegalaxy.fr | ||||
| 2023-11-22 | 2023-11-22 | Phylogenetic tree generation (maximum likelihood and Bayesian methods) Multiple sequence alignment | gene tree protein | https://usegalaxy.fr | ||||
| 2023-11-22 | 2023-11-22 | Phylogenetic tree generation (maximum likelihood and Bayesian methods) Multiple sequence alignment | gene tree nucleic | https://usegalaxy.fr | ||||
| 2024-02-15 | 2024-02-15 | Apache-2.0 | Fold recognition Genome visualisation Protein feature detection Information extraction Genome assembly Query and retrieval Sequence motif recognition Sequence annotation Homology-based gene prediction Scaffolding Genome annotation Transcriptome assembly Sequence alignment Sequence assembly validation | genome-annotation | WorkflowHub | |||
| 2023-06-01 | 2023-06-02 | GPL-3.0-or-later | Fold recognition Genome visualisation Information extraction Genome assembly Query and retrieval Sequence annotation Homology-based gene prediction Scaffolding Genome annotation Transcriptome assembly Sequence alignment Sequence assembly validation | genome-annotation | https://usegalaxy.org.au | |||
| 2023-06-01 | 2023-06-02 | GPL-3.0-or-later | Operation Genome visualisation Genome assembly Sequence annotation Homology-based gene prediction Scaffolding Genome annotation Transcriptome assembly Sequence assembly validation Gene prediction Ab-initio gene prediction | genome-annotation | https://usegalaxy.org.au | |||
| 2024-09-26 | 2024-09-27 | GPL-3.0-or-later | Gene prediction Genome annotation Genome visualisation Coding region prediction | genome-annotation GTN | https://usegalaxy.org | |||
| 2023-12-14 | 2023-12-14 | Gene prediction Genome annotation Genome visualisation Coding region prediction | genome-annotation name:microGalaxy | https://usegalaxy.eu | ||||
| 2021-03-19 | 2021-03-19 | Gene prediction Genome annotation Genome visualisation Coding region prediction | genome-annotation galaxy-training-network | https://usegalaxy.org.au | ||||
| 2021-10-14 | 2021-10-26 | Genome assembly De-novo assembly Scaffolding Visualisation Transcriptome assembly Cross-assembly Mapping assembly Sequence assembly validation | https://usegalaxy.eu | |||||
| 2020-12-14 | 2020-12-17 | Statistical calculation Genome visualisation Genome assembly Sequence composition calculation Read mapping Coding region prediction Validation Genome annotation Visualisation Gene prediction Sequence assembly visualisation Sequence assembly validation Sequencing quality control | https://usegalaxy.eu | |||||
| 2020-12-03 | 2020-12-03 | Sequencing quality control Genome visualisation Genome assembly De-novo assembly Coding region prediction Genome annotation Visualisation Box-Whisker plot plotting Cross-assembly Mapping assembly Gene prediction Filtering Sequence assembly visualisation Sequence assembly validation Scatter plot plotting | assembly | https://usegalaxy.eu | ||||
| 2024-02-15 | 2024-02-15 | MIT | Visualisation Cross-assembly Mapping assembly Genome assembly De-novo assembly Sequence assembly visualisation Sequence assembly validation | https://usegalaxy.eu | ||||
| 2024-02-15 | 2024-02-15 | MIT | Visualisation Cross-assembly Mapping assembly Genome assembly De-novo assembly Sequence assembly visualisation Sequence assembly validation | https://usegalaxy.org | ||||
| 2024-02-15 | 2024-02-15 | MIT | Visualisation Cross-assembly Mapping assembly Genome assembly De-novo assembly Sequence assembly visualisation Sequence assembly validation | https://usegalaxy.org.au | ||||
| 2024-04-04 | 2024-04-04 | MIT | Visualisation Cross-assembly Mapping assembly Genome assembly De-novo assembly Sequence assembly visualisation Sequence assembly validation | https://usegalaxy.eu | ||||
| 2024-03-28 | 2024-03-28 | MIT | Visualisation Cross-assembly Mapping assembly Genome assembly De-novo assembly Sequence assembly visualisation Sequence assembly validation | https://usegalaxy.org | ||||
| 2024-03-28 | 2024-03-28 | MIT | Visualisation Cross-assembly Mapping assembly Genome assembly De-novo assembly Sequence assembly visualisation Sequence assembly validation | https://usegalaxy.org.au | ||||
| 2024-09-03 | 2024-09-03 | GPL-3.0-or-later | Statistical calculation Genome assembly De-novo assembly Sequence composition calculation Cross-assembly Mapping assembly Sequence assembly visualisation Sequencing quality control | TSI genome_assembly nanopore | WorkflowHub | |||
| 2024-07-16 | 2024-09-03 | GPL-3.0-or-later | Statistical calculation Genome assembly De-novo assembly Sequence composition calculation Cross-assembly Mapping assembly Sequence assembly visualisation Sequencing quality control | genome_assembly nanopore TSI | https://usegalaxy.org.au | |||
| 2022-05-03 | 2022-10-17 | GPL-3.0-or-later | Phasing k-mer counting Genome assembly De-novo assembly Scaffolding Visualisation Transcriptome assembly Sequence assembly validation | hifi hifiasm QC Quast Meryl Merqury BUSCO | https://usegalaxy.org.au | |||
| 2014-05-06 | 2014-05-06 | https://usegalaxy.org | ||||||
| 2022-02-08 | 2022-09-26 | Operation Genome visualisation Genome assembly Sequence annotation Homology-based gene prediction Scaffolding Genome annotation Transcriptome assembly Sequence assembly validation Gene prediction Ab-initio gene prediction | https://usegalaxy.eu | |||||
| 2024-08-06 | 2024-08-06 | GPL-3.0 | Sequence assembly | Phasing k-mer counting Genome assembly De-novo assembly Scaffolding Visualisation Transcriptome assembly Sequence assembly validation | BUSCO HiFi Merqury Meryl QC Quast hifiasm | WorkflowHub | ||
| 2024-08-06 | 2024-08-06 | GPL-3.0 | Phasing k-mer counting Genome assembly De-novo assembly Scaffolding Visualisation Transcriptome assembly Sequence assembly validation | BUSCO HiFi Merqury Meryl QC Quast hifiasm | WorkflowHub | |||
| 2023-05-25 | 2023-05-25 | CC-BY-NC-4.0 | Transcriptomics | GTN Transcriptomics alternative-splicing | WorkflowHub | |||
| 2023-05-16 | 2023-06-11 | CC-BY-SA-4.0 | Statistical calculation Data handling De-novo assembly Sequence composition calculation Sequence comparison Sequence annotation Validation Sequence contamination filtering RNA-Seq analysis Transcriptome assembly Sequence analysis Sequence assembly validation Sequence alignment Protein sequence analysis Sequencing quality control | name:alternative_splicing name:GTN name:transcriptomics | https://usegalaxy.eu | |||
| 2023-05-20 | 2023-05-20 | CC-BY-SA-4.0 | Statistical calculation Data handling Sequence composition calculation Sequence comparison Validation Sequence contamination filtering RNA-Seq analysis Transcriptome assembly Sequence analysis Sequence alignment Protein sequence analysis Sequencing quality control | name:alternative_splicing name:GTN name:transcriptomics | https://usegalaxy.eu | |||
| 2023-06-11 | 2023-06-11 | CC-BY-NC-4.0 | Biomedical science Transcriptomics | Alternative splicing Transcriptomics isoform switching | WorkflowHub | |||
| 2023-06-12 | 2023-06-12 | CC-BY-SA-4.0 | Statistical calculation Data handling Sequence composition calculation Sequence comparison Sequence annotation Validation Sequence contamination filtering RNA-Seq analysis Transcriptome assembly Sequence analysis Sequence alignment Protein sequence analysis Sequencing quality control | name:alternative-splicing name:isoform-switching | https://usegalaxy.org.au | |||
| 2013-10-23 | 2013-10-25 | Differential gene expression analysis Gene prediction Sequence clustering | https://usegalaxy.eu | |||||
| 2013-10-25 | 2014-03-24 | Differential gene expression analysis Gene prediction Sequence clustering | https://usegalaxy.eu | |||||
| 2017-05-24 | 2017-05-26 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org | |||||
| 2023-02-12 | 2023-02-12 | Phylogenetic analysis Taxonomic classification Genome assembly Phylogenetic tree generation Coding region prediction Phylogenetic tree visualisation Sequence contamination filtering Variant calling Visualisation Genome annotation Antimicrobial resistance prediction Sequence analysis Validation Gene prediction Sequence assembly validation Sequencing quality control | WGS Illumina pathogen workflow | https://usegalaxy.eu | ||||
| 2023-02-12 | 2023-02-12 | Phylogenetic analysis Aggregation Coding region prediction Variant calling Genome annotation Antimicrobial resistance prediction Sequence assembly validation Sequencing quality control Taxonomic classification Genome assembly Phylogenetic tree generation Phylogenetic tree visualisation Sequence contamination filtering Sequence analysis Visualisation Validation Gene prediction | wgs illumina workflow pathogen | https://usegalaxy.eu | ||||
| 2019-09-26 | 2019-09-26 | https://usegalaxy.org | ||||||
| 2023-04-25 | 2023-05-20 | Formatting | violethaze74 LMD-Genome violethaze74@jazzededtech.com violethaze74@aol.com violethaze74@gmail.com lmd1174 Face1174 | https://usegalaxy.eu | ||||
| 2020-04-10 | 2023-01-16 | MIT | covid-19 | WorkflowHub | ||||
| 2020-04-10 | 2023-01-16 | MIT | covid-19 | WorkflowHub | ||||
| 2020-04-10 | 2023-01-16 | MIT | covid-19 | WorkflowHub | ||||
| 2020-04-10 | 2023-05-30 | MIT | covid-19 | WorkflowHub | ||||
| 2020-04-10 | 2023-01-16 | MIT | covid-19 | WorkflowHub | ||||
| 2020-04-10 | 2023-01-16 | MIT | covid-19 | WorkflowHub | ||||
| 2020-04-10 | 2023-01-16 | MIT | covid-19 | WorkflowHub | ||||
| 2020-04-10 | 2023-01-16 | MIT | covid-19 | WorkflowHub | ||||
| 2016-05-21 | 2016-05-21 | Statistical calculation Formatting Data handling Sequence alignment analysis Genome indexing Sequence composition calculation Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2017-10-29 | 2017-10-29 | Variant calling Statistical calculation Sequence alignment | https://usegalaxy.org | |||||
| 2014-08-13 | 2014-11-13 | Formatting Read mapping | https://usegalaxy.eu | |||||
| 2014-08-13 | 2014-11-20 | https://usegalaxy.eu | ||||||
| 2024-10-13 | 2024-10-13 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.eu | |||||
| 2021-03-04 | 2021-03-06 | COVID-19 covid19.galaxyproject.org | https://usegalaxy.eu | |||||
| 2023-09-07 | 2023-09-07 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.eu | |||
| 2023-09-07 | 2023-09-07 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2023-11-16 | 2023-11-16 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.eu | |||
| 2023-11-16 | 2023-11-16 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2023-11-30 | 2023-11-30 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.eu | |||
| 2023-11-30 | 2023-11-30 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2023-12-07 | 2023-12-07 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.eu | |||
| 2023-12-07 | 2023-12-07 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-03-07 | 2024-03-07 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.eu | |||
| 2024-04-11 | 2024-04-11 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.eu | |||
| 2024-04-18 | 2024-04-18 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-06-27 | 2024-06-27 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-06-20 | 2024-06-20 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-06-13 | 2024-06-13 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-06-06 | 2024-06-06 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-05-30 | 2024-05-30 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-05-23 | 2024-05-23 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-05-16 | 2024-05-16 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-05-09 | 2024-05-09 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-05-02 | 2024-05-02 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-04-25 | 2024-04-25 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-09-19 | 2024-09-19 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ATAC-seq | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ATAC-seq | https://usegalaxy.org | |||
| 2024-06-27 | 2024-06-27 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ATAC-seq | https://usegalaxy.org | |||
| 2024-06-20 | 2024-06-20 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ATAC-seq | https://usegalaxy.org | |||
| 2024-06-13 | 2024-06-13 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ATAC-seq | https://usegalaxy.org | |||
| 2024-06-06 | 2024-06-06 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ATAC-seq | https://usegalaxy.org | |||
| 2024-05-30 | 2024-05-30 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ATAC-seq | https://usegalaxy.org | |||
| 2024-05-23 | 2024-05-23 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ATAC-seq | https://usegalaxy.org | |||
| 2024-05-16 | 2024-05-16 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ATAC-seq | https://usegalaxy.org | |||
| 2024-05-09 | 2024-05-09 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ATAC-seq | https://usegalaxy.org | |||
| 2024-05-02 | 2024-05-02 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ATAC-seq | https://usegalaxy.org | |||
| 2024-09-19 | 2024-09-19 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ATAC-seq | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ATAC-seq | https://usegalaxy.org | |||
| 2024-06-27 | 2024-06-27 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ATAC-seq | https://usegalaxy.org | |||
| 2024-06-20 | 2024-06-20 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ATAC-seq | https://usegalaxy.org | |||
| 2024-06-13 | 2024-06-13 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ATAC-seq | https://usegalaxy.org | |||
| 2024-09-26 | 2024-09-26 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ATAC-seq | https://usegalaxy.eu | |||
| 2024-09-26 | 2024-09-26 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ATAC-seq | https://usegalaxy.org | |||
| 2023-09-07 | 2023-09-07 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.eu | |||
| 2023-09-07 | 2023-09-07 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2023-11-16 | 2023-11-16 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.eu | |||
| 2023-11-16 | 2023-11-16 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2023-11-30 | 2023-11-30 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.eu | |||
| 2023-11-30 | 2023-11-30 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2023-12-07 | 2023-12-07 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.eu | |||
| 2023-12-07 | 2023-12-07 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-03-07 | 2024-03-07 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.eu | |||
| 2024-04-11 | 2024-04-11 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-06-27 | 2024-06-27 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-06-20 | 2024-06-20 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-06-13 | 2024-06-13 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-06-06 | 2024-06-06 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-05-30 | 2024-05-30 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-05-23 | 2024-05-23 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-05-16 | 2024-05-16 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-05-09 | 2024-05-09 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-05-02 | 2024-05-02 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-04-25 | 2024-04-25 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-04-18 | 2024-04-18 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-06-27 | 2024-06-27 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-06-20 | 2024-06-20 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-06-13 | 2024-06-13 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-06-06 | 2024-06-06 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-05-30 | 2024-05-30 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-05-23 | 2024-05-23 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-05-16 | 2024-05-16 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-05-09 | 2024-05-09 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-05-02 | 2024-05-02 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-04-25 | 2024-04-25 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-09-19 | 2024-09-19 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ATAC-seq | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ATAC-seq | https://usegalaxy.org | |||
| 2024-06-27 | 2024-06-27 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ATAC-seq | https://usegalaxy.org | |||
| 2024-06-20 | 2024-06-20 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ATAC-seq | https://usegalaxy.org | |||
| 2024-06-13 | 2024-06-13 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ATAC-seq | https://usegalaxy.org | |||
| 2024-06-06 | 2024-06-06 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ATAC-seq | https://usegalaxy.org | |||
| 2024-05-30 | 2024-05-30 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ATAC-seq | https://usegalaxy.org | |||
| 2024-05-23 | 2024-05-23 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ATAC-seq | https://usegalaxy.org | |||
| 2024-05-16 | 2024-05-16 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ATAC-seq | https://usegalaxy.org | |||
| 2024-05-09 | 2024-05-09 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ATAC-seq | https://usegalaxy.org | |||
| 2024-05-02 | 2024-05-02 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ATAC-seq | https://usegalaxy.org | |||
| 2024-09-19 | 2024-09-19 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ATAC-seq | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ATAC-seq | https://usegalaxy.org | |||
| 2024-06-27 | 2024-06-27 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ATAC-seq | https://usegalaxy.org | |||
| 2024-06-20 | 2024-06-20 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ATAC-seq | https://usegalaxy.org | |||
| 2024-06-13 | 2024-06-13 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ATAC-seq | https://usegalaxy.org | |||
| 2024-09-26 | 2024-09-26 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ATAC-seq | https://usegalaxy.eu | |||
| 2024-09-26 | 2024-09-26 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ATAC-seq | https://usegalaxy.org | |||
| 2023-09-07 | 2023-09-07 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.eu | |||
| 2023-09-07 | 2023-09-07 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2023-11-16 | 2023-11-16 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.eu | |||
| 2023-11-16 | 2023-11-16 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2023-11-30 | 2023-11-30 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.eu | |||
| 2023-11-30 | 2023-11-30 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2023-12-07 | 2023-12-07 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.eu | |||
| 2023-12-07 | 2023-12-07 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-03-07 | 2024-03-07 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.eu | |||
| 2024-04-11 | 2024-04-11 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-06-27 | 2024-06-27 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-06-20 | 2024-06-20 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-06-13 | 2024-06-13 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-06-06 | 2024-06-06 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-05-30 | 2024-05-30 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-05-23 | 2024-05-23 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-05-16 | 2024-05-16 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-05-09 | 2024-05-09 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-05-02 | 2024-05-02 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-04-25 | 2024-04-25 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-04-18 | 2024-04-18 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-06-27 | 2024-06-27 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-06-20 | 2024-06-20 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-06-13 | 2024-06-13 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-06-06 | 2024-06-06 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-05-30 | 2024-05-30 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-05-23 | 2024-05-23 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-05-16 | 2024-05-16 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-05-09 | 2024-05-09 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-05-02 | 2024-05-02 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-04-25 | 2024-04-25 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ChIP | https://usegalaxy.org | |||
| 2024-09-19 | 2024-09-19 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ATAC-seq | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ATAC-seq | https://usegalaxy.org | |||
| 2024-06-27 | 2024-06-27 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ATAC-seq | https://usegalaxy.org | |||
| 2024-06-20 | 2024-06-20 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ATAC-seq | https://usegalaxy.org | |||
| 2024-06-13 | 2024-06-13 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ATAC-seq | https://usegalaxy.org | |||
| 2024-06-06 | 2024-06-06 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ATAC-seq | https://usegalaxy.org | |||
| 2024-05-30 | 2024-05-30 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ATAC-seq | https://usegalaxy.org | |||
| 2024-05-23 | 2024-05-23 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ATAC-seq | https://usegalaxy.org | |||
| 2024-05-16 | 2024-05-16 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ATAC-seq | https://usegalaxy.org | |||
| 2024-05-09 | 2024-05-09 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ATAC-seq | https://usegalaxy.org | |||
| 2024-05-02 | 2024-05-02 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ATAC-seq | https://usegalaxy.org | |||
| 2024-09-19 | 2024-09-19 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ATAC-seq | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ATAC-seq | https://usegalaxy.org | |||
| 2024-06-27 | 2024-06-27 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ATAC-seq | https://usegalaxy.org | |||
| 2024-06-20 | 2024-06-20 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ATAC-seq | https://usegalaxy.org | |||
| 2024-06-13 | 2024-06-13 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ATAC-seq | https://usegalaxy.org | |||
| 2024-09-26 | 2024-09-26 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ATAC-seq | https://usegalaxy.eu | |||
| 2024-09-26 | 2024-09-26 | MIT | Validation Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | ATAC-seq | https://usegalaxy.org | |||
| 2021-02-26 | 2021-02-26 | https://usegalaxy.eu | ||||||
| 2012-05-25 | 2012-05-25 | https://usegalaxy.org | ||||||
| 2016-05-31 | 2016-06-01 | aye-aye GigaScience Miller Galaxy tools tutorial to study genome diverstiy phylogenetic tree snp coverage PCA | https://usegalaxy.org | |||||
| 2016-05-31 | 2016-06-09 | https://usegalaxy.org | ||||||
| 2016-05-31 | 2016-06-09 | https://usegalaxy.org | ||||||
| 2016-06-01 | 2016-06-09 | https://usegalaxy.org | ||||||
| 2024-08-12 | 2024-08-12 | Sequence alignment | https://usegalaxy.org | |||||
| 2024-08-12 | 2024-08-12 | Sequence alignment | https://usegalaxy.org.au | |||||
| 2024-08-12 | 2024-08-12 | Variant calling RNA-Seq analysis Transcriptome assembly Statistical calculation Sequence alignment Sequence annotation | https://usegalaxy.org | |||||
| 2024-08-12 | 2024-08-12 | Variant calling RNA-Seq analysis Transcriptome assembly Statistical calculation Sequence alignment Sequence annotation | https://usegalaxy.org.au | |||||
| 2014-12-24 | 2015-03-17 | Mapping Read mapping | https://usegalaxy.org | |||||
| 2021-06-18 | 2021-06-19 | Statistical calculation Genome indexing Sequence composition calculation Read mapping Variant calling Sequence analysis Generation Sequence alignment Genetic variation analysis Sequencing quality control | https://usegalaxy.eu | |||||
| 2014-03-22 | 2015-05-12 | Sequence analysis Sequence alignment analysis Sequence alignment Local alignment Global alignment | https://usegalaxy.eu | |||||
| 2024-08-16 | 2024-09-10 | MIT | Gene-set enrichment analysis | https://usegalaxy.eu | ||||
| 2021-03-19 | 2021-03-19 | Gene-set enrichment analysis | transcriptomics galaxy-training-network | https://usegalaxy.org.au | ||||
| 2020-03-29 | 2020-03-29 | https://usegalaxy.org | ||||||
| 2019-11-18 | 2019-11-18 | Read mapping | https://usegalaxy.org | |||||
| 2023-01-16 | 2023-08-17 | https://usegalaxy.eu | ||||||
| 2020-05-19 | 2020-05-19 | https://usegalaxy.eu | ||||||
| 2019-05-14 | 2020-05-19 | https://usegalaxy.eu | ||||||
| 2019-05-14 | 2020-05-19 | https://usegalaxy.eu | ||||||
| 2020-05-19 | 2020-05-19 | https://usegalaxy.eu | ||||||
| 2019-01-28 | 2019-02-03 | Nucleic acid feature detection | PUBLISHED | https://usegalaxy.eu | ||||
| 2019-01-28 | 2019-02-03 | Nucleic acid feature detection | PUBLISHED | https://usegalaxy.eu | ||||
| 2019-01-28 | 2019-02-03 | Nucleic acid feature detection | PUBLISHED | https://usegalaxy.eu | ||||
| 2019-06-28 | 2019-06-28 | https://usegalaxy.eu | ||||||
| 2020-04-07 | 2020-04-07 | computational-chemistry galaxy-training-network | https://usegalaxy.org.au | |||||
| 2021-12-21 | 2024-07-01 | MIT | WorkflowHub | |||||
| 2023-11-28 | 2024-07-01 | MIT | WorkflowHub | |||||
| 2019-05-07 | 2019-05-07 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2024-08-31 | 2024-08-31 | Phasing k-mer counting Genome assembly De-novo assembly Scaffolding Visualisation Transcriptome assembly Sequence assembly validation | https://usegalaxy.org.au | |||||
| 2024-08-31 | 2024-08-31 | Validation Statistical calculation Sequence trimming Sequence composition calculation Read pre-processing Primer removal Sequencing quality control | https://usegalaxy.org.au | |||||
| 2024-08-31 | 2024-08-31 | Validation Statistical calculation Sequence trimming Sequence composition calculation Read pre-processing Primer removal Sequencing quality control | https://usegalaxy.org.au | |||||
| 2024-08-31 | 2024-08-31 | Box-Whisker plot plotting Scatter plot plotting | https://usegalaxy.org.au | |||||
| 2024-08-31 | 2024-08-31 | Statistical calculation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2013-06-04 | 2013-06-13 | https://usegalaxy.org | ||||||
| 2024-10-18 | 2024-10-18 | Formatting Data handling Taxonomic classification Genome alignment Mapping Query and retrieval Data retrieval Generation Sequence assembly | https://usegalaxy.eu | |||||
| 2021-12-28 | 2021-12-28 | MIT | Visualisation | pangeo climate copernicus GTN | https://usegalaxy.eu | |||
| 2020-04-17 | 2020-08-31 | Statistical calculation Sequence composition calculation Mapping Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Sequence trimming Peak calling Read pre-processing Sequencing quality control | epigenetics galaxy-training-network | https://usegalaxy.org.au | ||||
| 2021-03-19 | 2021-03-19 | Statistical calculation Data handling Sequence alignment analysis Sequence composition calculation Read mapping Primer removal Validation Sequence trimming Read pre-processing Sequencing quality control | sequence-analysis galaxy-training-network | https://usegalaxy.org.au | ||||
| 2021-03-19 | 2021-03-19 | Statistical calculation Genome visualisation Sequence composition calculation Read mapping Primer removal Validation Sequence trimming Read pre-processing Sequencing quality control | sequence-analysis galaxy-training-network | https://usegalaxy.org.au | ||||
| 2023-07-16 | 2023-07-16 | Statistical calculation Genome visualisation Sequence composition calculation Read mapping Primer removal Validation Sequence trimming Read pre-processing Sequencing quality control | sequence-analysis | https://usegalaxy.org | ||||
| 2021-03-19 | 2021-03-19 | Validation Statistical calculation Sequence trimming Sequence composition calculation Read pre-processing Primer removal Sequencing quality control | sequence-analysis galaxy-training-network | https://usegalaxy.org.au | ||||
| 2021-01-27 | 2021-01-27 | Peptide database search Conversion | name:GalaxyP name:Proteogenomics name:GTN | https://usegalaxy.eu | ||||
| 2021-03-19 | 2021-03-19 | Peptide database search Conversion | proteomics galaxy-training-network | https://usegalaxy.org.au | ||||
| 2021-01-27 | 2021-01-27 | name:GalaxyP name:Proteogenomics name:GTN | https://usegalaxy.eu | |||||
| 2021-03-19 | 2021-03-19 | proteomics galaxy-training-network | https://usegalaxy.org.au | |||||
| 2021-01-27 | 2021-01-27 | Variant calling RNA-Seq analysis Transcriptome assembly Statistical calculation Sequence alignment Sequence annotation | name:GalaxyP name:Proteogenomics name:GTN | https://usegalaxy.eu | ||||
| 2021-03-19 | 2021-03-19 | Variant calling RNA-Seq analysis Transcriptome assembly Statistical calculation Sequence alignment Sequence annotation | proteomics galaxy-training-network | https://usegalaxy.org.au | ||||
| 2022-11-24 | 2023-02-13 | CC-BY-4.0 | Microbiology | Genome assembly De-novo assembly Aggregation Pairwise sequence alignment Sequence analysis Box-Whisker plot plotting Mapping assembly Sequence assembly visualisation Scatter plot plotting | Metagenomics | WorkflowHub | ||
| 2024-10-17 | 2024-10-17 | Visualisation | introduction | https://usegalaxy.cz | ||||
| 2021-03-19 | 2021-03-19 | Visualisation | introduction galaxy-training-network | https://usegalaxy.org.au | ||||
| 2021-03-19 | 2021-03-19 | Visualisation Image annotation Data handling Image analysis | imaging galaxy-training-network | https://usegalaxy.org.au | ||||
| 2021-08-05 | 2021-08-06 | https://usegalaxy.eu | ||||||
| 2022-12-05 | 2022-12-05 | https://usegalaxy.eu | ||||||
| 2024-08-31 | 2024-08-31 | Statistical calculation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2018-10-10 | 2018-10-10 | https://usegalaxy.eu | ||||||
| 2020-12-29 | 2021-02-14 | Genome indexing Generation Read mapping Sequence alignment | https://usegalaxy.org.au | |||||
| 2022-12-16 | 2023-01-03 | Statistical calculation Gene prediction Genome annotation Coding region prediction Genome assembly Sequence composition calculation Aggregation Sequencing quality control | https://usegalaxy.org | |||||
| 2021-05-05 | 2021-05-06 | Sequence alignment | https://usegalaxy.org | |||||
| 2021-05-01 | 2021-05-06 | Genome visualisation Sequence alignment Nucleic acid sequence analysis | https://usegalaxy.org.au | |||||
| 2024-01-13 | 2024-01-13 | Validation Variant calling Statistical calculation Sequence composition calculation Read mapping Sequencing quality control | https://usegalaxy.org | |||||
| 2013-01-12 | 2013-01-12 | https://usegalaxy.org | ||||||
| 2012-08-14 | 2012-08-15 | https://usegalaxy.org | ||||||
| 2021-03-19 | 2021-03-19 | transcriptomics galaxy-training-network | https://usegalaxy.org.au | |||||
| 2016-03-15 | 2016-03-29 | Sequence composition calculation Statistical calculation Read mapping Sequencing quality control | ChIP-seq bowtie Mapping | https://usegalaxy.org | ||||
| 2024-02-23 | 2024-03-26 | Genome visualisation Genome assembly Scaffolding Sequence analysis Transcriptome assembly Genome annotation RNA-Seq analysis Gene prediction Editing Sequence assembly validation | https://usegalaxy.fr | |||||
| 2024-03-27 | 2024-04-11 | Genome visualisation Genome assembly Sequence annotation Scaffolding Sequence analysis Transcriptome assembly Genome annotation RNA-Seq analysis Differential protein expression profiling Gene prediction Editing Sequence assembly validation | Genomeannotation Helixer Visualization Red | https://usegalaxy.eu | ||||
| 2024-04-24 | 2024-05-15 | Genome visualisation Genome assembly Sequence annotation Scaffolding Sequence analysis Transcriptome assembly Genome annotation Differential protein expression profiling Repeat sequence detection Gene prediction Sequence assembly validation | Genomeannotation Helixer Visualization | https://usegalaxy.eu | ||||
| 2024-02-28 | 2024-03-26 | Genome visualisation Genome assembly Scaffolding Sequence analysis Transcriptome assembly Genome annotation Repeat sequence detection Gene prediction Sequence assembly validation | https://usegalaxy.fr | |||||
| 2024-03-18 | 2024-04-11 | Genome visualisation Genome assembly Sequence annotation Scaffolding Sequence analysis Transcriptome assembly Genome annotation Differential protein expression profiling Repeat sequence detection Gene prediction Sequence assembly validation | Genomeannotation Helixer Visualization RepeatMasker RepeatModeler | https://usegalaxy.eu | ||||
| 2023-04-21 | 2023-04-21 | Sequence alignment | https://usegalaxy.eu | |||||
| 2012-12-10 | 2015-01-26 | https://usegalaxy.org | ||||||
| 2012-10-23 | 2015-01-26 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org | |||||
| 2015-11-10 | 2015-11-10 | Variant calling Statistical calculation | https://usegalaxy.org | |||||
| 2023-03-23 | 2023-03-23 | MIT | Formatting Visualisation | Hi-C | https://usegalaxy.eu | |||
| 2023-02-23 | 2023-02-23 | MIT | Formatting Visualisation | Hi-C | https://usegalaxy.org | |||
| 2023-09-07 | 2023-09-07 | MIT | Formatting Visualisation | Hi-C | https://usegalaxy.eu | |||
| 2023-09-07 | 2023-09-07 | MIT | Formatting Visualisation | Hi-C | https://usegalaxy.org | |||
| 2023-09-07 | 2023-09-07 | MIT | Formatting Visualisation | Hi-C | https://usegalaxy.eu | |||
| 2023-09-07 | 2023-09-07 | MIT | Formatting Visualisation | Hi-C | https://usegalaxy.org | |||
| 2024-09-19 | 2024-09-19 | MIT | Formatting Visualisation | Hi-C | https://usegalaxy.eu | |||
| 2024-04-11 | 2024-04-11 | MIT | Formatting Visualisation | Hi-C | https://usegalaxy.org | |||
| 2023-08-31 | 2023-08-31 | MIT | Hi-C | https://usegalaxy.eu | ||||
| 2023-02-23 | 2023-02-23 | MIT | Hi-C | https://usegalaxy.org | ||||
| 2023-09-07 | 2023-09-07 | MIT | Hi-C | https://usegalaxy.eu | ||||
| 2023-09-07 | 2023-09-07 | MIT | Hi-C | https://usegalaxy.org | ||||
| 2023-09-07 | 2023-09-07 | MIT | Hi-C | https://usegalaxy.eu | ||||
| 2023-09-07 | 2023-09-07 | MIT | Hi-C | https://usegalaxy.org | ||||
| 2023-09-21 | 2023-09-21 | MIT | Hi-C | https://usegalaxy.eu | ||||
| 2023-09-21 | 2023-09-21 | MIT | Hi-C | https://usegalaxy.org | ||||
| 2023-03-23 | 2023-03-23 | MIT | Hi-C | https://usegalaxy.eu | ||||
| 2023-02-23 | 2023-02-23 | MIT | Hi-C | https://usegalaxy.org | ||||
| 2023-09-07 | 2023-09-07 | MIT | Hi-C | https://usegalaxy.eu | ||||
| 2023-09-07 | 2023-09-07 | MIT | Hi-C | https://usegalaxy.org | ||||
| 2023-09-07 | 2023-09-07 | MIT | Hi-C | https://usegalaxy.eu | ||||
| 2023-09-07 | 2023-09-07 | MIT | Hi-C | https://usegalaxy.org | ||||
| 2024-09-19 | 2024-09-19 | MIT | Hi-C | https://usegalaxy.eu | ||||
| 2024-04-11 | 2024-04-11 | MIT | Hi-C | https://usegalaxy.org | ||||
| 2023-09-16 | 2024-10-17 | MIT | Formatting Visualisation | Hi-C | WorkflowHub | |||
| 2021-08-30 | 2021-08-30 | CC-BY-4.0 | Phasing k-mer counting Genome assembly De-novo assembly Primer removal Scaffolding Read binning Pairwise sequence alignment Sequence trimming Visualisation Transcriptome assembly Read pre-processing Sequence assembly validation | https://usegalaxy.eu | ||||
| 2021-05-04 | 2021-05-06 | Sequence composition calculation Statistical calculation Sequence alignment Sequencing quality control | https://usegalaxy.org.au | |||||
| 2024-04-08 | 2024-04-08 | Validation RNA-Seq quantification Sequence alignment Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2020-06-04 | 2020-06-05 | RNA-Seq analysis Transcriptome assembly Sequence alignment Sequence annotation | https://usegalaxy.org | |||||
| 2012-08-01 | 2012-08-22 | https://usegalaxy.org | ||||||
| 2024-09-24 | 2024-09-26 | Expression analysis Rarefaction Phylogenetic reconstruction Pathway analysis | https://usegalaxy.eu | |||||
| 2023-06-22 | 2023-06-22 | Sequence analysis Sequence alignment analysis Sequence alignment Local alignment Global alignment | https://usegalaxy.org | |||||
| 2023-10-17 | 2023-10-17 | Mapping | https://usegalaxy.org | |||||
| 2020-01-08 | 2020-01-09 | cheminformatics | https://usegalaxy.eu | |||||
| 2014-04-01 | 2014-04-29 | https://usegalaxy.org | ||||||
| 2014-03-25 | 2014-04-29 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org | |||||
| 2023-06-26 | 2023-06-27 | CC-BY-4.0 | Validation Sequence contamination filtering Formatting Read summarisation RNA-Seq quantification Sequence alignment Sequencing quality control | combined-genomes dual_RNA-Seq host-pathogen bwa-mem2 | https://usegalaxy.org.au | |||
| 2023-05-19 | 2023-05-19 | Read mapping | https://usegalaxy.eu | |||||
| 2022-08-18 | 2022-08-18 | https://usegalaxy.eu | ||||||
| 2023-10-01 | 2023-12-03 | CC-BY-4.0 | https://usegalaxy.eu | |||||
| 2023-01-25 | 2023-01-25 | Statistical calculation Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Sequencing quality control | https://usegalaxy.org | |||||
| 2020-05-01 | 2020-05-04 | cheminformatics moleculardynamics | https://usegalaxy.eu | |||||
| 2022-07-08 | 2023-01-16 | CC-BY-4.0 | Default-SDR collections multi-specimen-input validated-2022-06-29 | WorkflowHub | ||||
| 2019-05-14 | 2020-05-19 | https://usegalaxy.eu | ||||||
| 2019-05-14 | 2020-05-19 | https://usegalaxy.eu | ||||||
| 2019-07-10 | 2020-10-26 | https://usegalaxy.eu | ||||||
| 2015-11-20 | 2015-11-30 | Variant calling Statistical calculation | https://usegalaxy.org | |||||
| 2014-03-27 | 2014-04-29 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org | |||||
| 2014-04-01 | 2014-04-29 | https://usegalaxy.org | ||||||
| 2014-04-18 | 2014-04-29 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org | |||||
| 2014-04-19 | 2014-04-29 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org | |||||
| 2014-04-24 | 2014-04-25 | https://usegalaxy.org | ||||||
| 2020-09-07 | 2021-06-04 | Genome assembly De-novo assembly Genome indexing Read mapping Scaffolding Analysis Visualisation Transcriptome assembly Generation Cross-assembly Mapping assembly Read alignment Sequence assembly Sequence alignment Sequence assembly validation | https://usegalaxy.org.au | |||||
| 2020-09-07 | 2021-08-12 | Statistical calculation Genome assembly Sequence composition calculation Filtering Aggregation Scaffolding Validation Sequence contamination filtering Visualisation Transcriptome assembly Box-Whisker plot plotting Sequencing quality control Sequence assembly validation Scatter plot plotting | https://usegalaxy.org.au | |||||
| 2022-03-19 | 2022-03-19 | Formatting Statistical calculation Data handling Sequence alignment analysis Genome indexing Read mapping Variant calling Generation Sequence alignment | https://usegalaxy.org | |||||
| 2023-04-02 | 2023-04-17 | Statistical calculation Data handling Sequence alignment analysis Genome indexing Sequence composition calculation Read mapping Variant calling Validation Generation Sequence alignment Sequencing quality control | variant-analysis | https://usegalaxy.eu | ||||
| 2021-03-19 | 2021-03-19 | Statistical calculation Genome indexing Sequence composition calculation Mapping Read mapping Enrichment analysis Gene regulatory network analysis Peak calling Generation Sequence alignment Sequencing quality control | epigenetics galaxy-training-network | https://usegalaxy.org.au | ||||
| 2023-12-14 | 2023-12-14 | MIT | Sequence contamination filtering Statistical calculation Visualisation Taxonomic classification Sequence composition calculation Aggregation Sequencing quality control | Metagenomics name:microGalaxy | https://usegalaxy.eu | |||
| 2019-06-06 | 2019-06-06 | Training GCC2019 | https://usegalaxy.eu | |||||
| 2021-05-29 | 2021-05-29 | Visualisation Prediction and recognition | https://usegalaxy.eu | |||||
| 2023-05-19 | 2023-05-19 | Read mapping | https://usegalaxy.eu | |||||
| 2022-05-02 | 2023-02-10 | Statistical calculation Genome assembly Sequence composition calculation Read mapping Validation Sequence contamination filtering Visualisation Sequence alignment Sequence assembly validation Sequencing quality control | genome-assembly | https://usegalaxy.eu | ||||
| 2011-08-02 | 2012-12-03 | illumina | https://usegalaxy.org | |||||
| 2019-03-01 | 2019-03-01 | Formatting Visualisation Prediction and recognition Filtering Label-free quantification | https://usegalaxy.eu | |||||
| 2012-04-06 | 2013-07-04 | https://usegalaxy.org | ||||||
| 2019-01-27 | 2019-01-30 | https://usegalaxy.eu | ||||||
| 2020-05-13 | 2020-05-14 | Statistical calculation Sequence trimming Sequence composition calculation Read pre-processing Primer removal Sequencing quality control | https://usegalaxy.org.au | |||||
| 2011-11-16 | 2011-12-01 | https://usegalaxy.org | ||||||
| 2011-11-16 | 2011-11-16 | https://usegalaxy.org | ||||||
| 2013-02-25 | 2013-02-25 | https://usegalaxy.org | ||||||
| 2012-09-24 | 2012-11-27 | https://usegalaxy.org | ||||||
| 2014-08-20 | 2014-08-20 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org | |||||
| 2012-01-19 | 2014-03-27 | https://usegalaxy.org | ||||||
| 2020-06-19 | 2020-06-20 | Formatting Genome indexing Read mapping Validation Sequence contamination filtering Generation Sequence alignment Sequencing quality control | https://usegalaxy.org.au | |||||
| 2013-11-18 | 2013-11-19 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org | |||||
| 2021-03-10 | 2021-03-10 | Differential gene expression analysis | https://usegalaxy.eu | |||||
| 2020-02-14 | 2020-02-14 | https://usegalaxy.eu | ||||||
| 2012-02-29 | 2012-03-02 | https://usegalaxy.org | ||||||
| 2012-06-15 | 2012-12-12 | https://usegalaxy.org | ||||||
| 2012-02-01 | 2012-03-07 | https://usegalaxy.org | ||||||
| 2011-11-23 | 2012-03-26 | https://usegalaxy.org | ||||||
| 2020-10-06 | 2020-10-06 | Filtering Visualisation Prediction and recognition Formatting | https://usegalaxy.eu | |||||
| 2012-06-19 | 2012-06-19 | https://usegalaxy.org | ||||||
| 2011-01-10 | 2011-07-26 | https://usegalaxy.org | ||||||
| 2016-05-24 | 2016-05-25 | Sequence composition calculation Statistical calculation Formatting Sequencing quality control | https://usegalaxy.org | |||||
| 2010-01-29 | 2010-02-01 | https://usegalaxy.org | ||||||
| 2011-05-16 | 2012-03-16 | https://usegalaxy.org | ||||||
| 2021-01-18 | 2021-01-18 | Variant calling RNA-Seq analysis Transcriptome assembly Statistical calculation Sequence alignment Sequence annotation | https://usegalaxy.eu | |||||
| 2021-01-18 | 2021-01-18 | Peptide database search Conversion | https://usegalaxy.eu | |||||
| 2021-01-18 | 2021-01-18 | https://usegalaxy.eu | ||||||
| 2022-08-07 | 2022-08-08 | Variant calling RNA-Seq analysis Transcriptome assembly Statistical calculation Sequence alignment Sequence annotation | https://usegalaxy.eu | |||||
| 2018-02-25 | 2018-02-25 | Mapping | https://usegalaxy.org | |||||
| 2012-12-07 | 2012-12-07 | https://usegalaxy.org | ||||||
| 2022-03-02 | 2022-03-11 | Statistical calculation Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequence annotation Sequencing quality control | https://usegalaxy.org | |||||
| 2023-09-12 | 2023-09-19 | CC-BY-4.0 | name:single-cell | https://usegalaxy.eu | ||||
| 2024-07-26 | 2024-07-28 | AGPL-3.0-or-later | Phylogenetic analysis Data handling Sequence alignment analysis De-novo assembly Genome indexing Sequence file editing Read mapping Sequence contamination filtering Sequence analysis Base position variability plotting Generation Data retrieval Multiple sequence alignment Sequence alignment Sequencing quality control | AIV VETLAB virology | https://usegalaxy.eu | |||
| 2017-08-24 | 2017-08-24 | https://usegalaxy.org | ||||||
| 2021-04-01 | 2022-12-08 | MIT | https://usegalaxy.eu | |||||
| 2021-04-23 | 2022-09-25 | MIT | https://usegalaxy.org | |||||
| 2011-08-22 | 2011-11-04 | https://usegalaxy.org | ||||||
| 2021-04-10 | 2022-12-08 | MIT | https://usegalaxy.eu | |||||
| 2021-04-23 | 2023-03-06 | MIT | https://usegalaxy.org | |||||
| 2021-12-20 | 2024-05-23 | MIT | Validation Statistical calculation Sequence composition calculation Sequencing quality control | EBV Genetic | https://usegalaxy.eu | |||
| 2020-04-07 | 2020-04-07 | Statistical calculation Formatting De-novo assembly Sequence composition calculation Validation Visualisation Sequence assembly validation Sequencing quality control | assembly galaxy-training-network | https://usegalaxy.org.au | ||||
| 2024-02-08 | 2024-02-08 | CC-BY-4.0 | https://usegalaxy.org | |||||
| 2023-03-07 | 2023-05-02 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2020-11-20 | 2020-11-20 | https://usegalaxy.eu | ||||||
| 2021-12-20 | 2023-01-16 | Apache-2.0 | RELIANCE air-quality copernicus | WorkflowHub | ||||
| 2021-09-09 | 2021-10-21 | Visualisation | https://usegalaxy.eu | |||||
| 2023-02-10 | 2023-02-11 | Sequence comparison Sequence analysis Protein sequence analysis | https://usegalaxy.eu | |||||
| 2018-08-01 | 2018-08-02 | Sequence read processing Phylogenetic analysis Taxonomic classification Visualisation Sequence clustering DNA barcoding Sequencing quality control | https://usegalaxy.eu | |||||
| 2024-03-29 | 2024-03-30 | Pairwise sequence alignment Structure visualisation Genome visualisation Pathway visualisation | https://usegalaxy.eu | |||||
| 2014-02-11 | 2014-02-11 | https://usegalaxy.org | ||||||
| 2018-09-10 | 2018-09-11 | https://usegalaxy.org | ||||||
| 2017-09-08 | 2017-09-08 | Variant calling Statistical calculation Read mapping | https://usegalaxy.org | |||||
| 2021-06-22 | 2021-06-24 | Filtering Formatting | name:EncyclopeDIA name:GTN | https://usegalaxy.eu | ||||
| 2021-06-23 | 2022-01-24 | Filtering Formatting | https://usegalaxy.eu | |||||
| 2017-01-06 | 2017-01-10 | https://usegalaxy.org | ||||||
| 2023-01-11 | 2023-01-17 | CC-BY-4.0 | VGP PAG2023 | https://usegalaxy.eu | ||||
| 2023-01-03 | 2023-01-09 | CC-BY-4.0 | VGP_curated | https://usegalaxy.eu | ||||
| 2023-09-19 | 2023-09-21 | CC-BY-4.0 | VGP BGA23 | https://usegalaxy.org | ||||
| 2022-12-12 | 2023-01-09 | CC-BY-4.0 | VGP_curated | https://usegalaxy.eu | ||||
| 2020-12-03 | 2022-06-21 | Statistical calculation RNA-Seq quantification Sequence composition calculation Read mapping Read summarisation Sequencing quality control | https://usegalaxy.org | |||||
| 2024-07-24 | 2024-08-30 | https://usegalaxy.org | ||||||
| 2015-05-07 | 2015-07-04 | Variant calling Statistical calculation | https://usegalaxy.org | |||||
| 2023-05-19 | 2023-05-19 | Read mapping | https://usegalaxy.eu | |||||
| 2021-11-08 | 2023-01-30 | Apache-2.0 | Sequence assembly | Large-genome-assembly | WorkflowHub | |||
| 2021-09-30 | 2021-11-09 | LG-WF | https://usegalaxy.org.au | |||||
| 2023-11-09 | 2023-11-09 | CC-BY-4.0 | Reviewed VGP | https://usegalaxy.eu | ||||
| 2023-11-09 | 2023-11-09 | CC-BY-4.0 | Reviewed VGP | https://usegalaxy.org | ||||
| 2023-11-13 | 2023-11-13 | CC-BY-4.0 | Reviewed VGP | https://usegalaxy.org.au | ||||
| 2023-11-13 | 2023-11-13 | CC-BY-4.0 | Reviewed VGP | https://usegalaxy.eu | ||||
| 2023-11-13 | 2023-11-13 | CC-BY-4.0 | Reviewed VGP | https://usegalaxy.org | ||||
| 2023-11-13 | 2023-11-13 | CC-BY-4.0 | Reviewed VGP | https://usegalaxy.org.au | ||||
| 2023-11-30 | 2023-11-30 | CC-BY-4.0 | Reviewed VGP | https://usegalaxy.eu | ||||
| 2023-11-30 | 2023-11-30 | CC-BY-4.0 | Reviewed VGP | https://usegalaxy.org | ||||
| 2023-12-07 | 2023-12-07 | CC-BY-4.0 | Reviewed VGP | https://usegalaxy.org.au | ||||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Reviewed VGP | https://usegalaxy.eu | ||||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Reviewed VGP | https://usegalaxy.org | ||||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Reviewed VGP | https://usegalaxy.org.au | ||||
| 2024-10-07 | 2024-10-13 | CC-BY-4.0 | WorkflowHub | |||||
| 2023-11-09 | 2023-11-09 | CC-BY-4.0 | Reviewed VGP | https://usegalaxy.eu | ||||
| 2023-11-09 | 2023-11-09 | CC-BY-4.0 | Reviewed VGP | https://usegalaxy.org | ||||
| 2023-11-13 | 2023-11-13 | CC-BY-4.0 | Reviewed VGP | https://usegalaxy.org.au | ||||
| 2023-11-09 | 2023-11-09 | CC-BY-4.0 | Reviewed VGP | https://usegalaxy.eu | ||||
| 2023-11-09 | 2023-11-09 | CC-BY-4.0 | Reviewed VGP | https://usegalaxy.org | ||||
| 2023-11-13 | 2023-11-13 | CC-BY-4.0 | Reviewed VGP | https://usegalaxy.org.au | ||||
| 2023-11-13 | 2023-11-13 | CC-BY-4.0 | Reviewed VGP | https://usegalaxy.eu | ||||
| 2023-11-13 | 2023-11-13 | CC-BY-4.0 | Reviewed VGP | https://usegalaxy.org | ||||
| 2023-11-13 | 2023-11-13 | CC-BY-4.0 | Reviewed VGP | https://usegalaxy.org.au | ||||
| 2023-11-23 | 2023-11-23 | CC-BY-4.0 | Reviewed VGP | https://usegalaxy.eu | ||||
| 2023-11-23 | 2023-11-23 | CC-BY-4.0 | Reviewed VGP | https://usegalaxy.org | ||||
| 2023-11-23 | 2023-11-23 | CC-BY-4.0 | Reviewed VGP | https://usegalaxy.org.au | ||||
| 2023-11-30 | 2023-11-30 | CC-BY-4.0 | Reviewed VGP | https://usegalaxy.eu | ||||
| 2023-11-30 | 2023-11-30 | CC-BY-4.0 | Reviewed VGP | https://usegalaxy.org | ||||
| 2023-12-07 | 2023-12-07 | CC-BY-4.0 | Reviewed VGP | https://usegalaxy.org.au | ||||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Reviewed VGP | https://usegalaxy.eu | ||||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Reviewed VGP | https://usegalaxy.org | ||||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Reviewed VGP | https://usegalaxy.org.au | ||||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Reviewed VGP | https://usegalaxy.eu | ||||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Reviewed VGP | https://usegalaxy.org | ||||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Reviewed VGP | https://usegalaxy.org.au | ||||
| 2024-10-07 | 2024-10-13 | CC-BY-4.0 | WorkflowHub | |||||
| 2020-05-19 | 2020-05-19 | https://usegalaxy.eu | ||||||
| 2020-05-19 | 2020-05-19 | https://usegalaxy.eu | ||||||
| 2019-05-14 | 2020-05-19 | https://usegalaxy.eu | ||||||
| 2019-05-14 | 2020-05-19 | https://usegalaxy.eu | ||||||
| 2024-01-31 | 2024-02-13 | Visualisation Taxonomic classification | https://usegalaxy.eu | |||||
| 2022-11-13 | 2022-11-13 | Visualisation Taxonomic classification | https://usegalaxy.eu | |||||
| 2022-11-13 | 2022-11-13 | Visualisation Taxonomic classification | https://usegalaxy.eu | |||||
| 2014-11-04 | 2014-11-04 | https://usegalaxy.org | ||||||
| 2015-02-07 | 2015-02-07 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org | |||||
| 2024-03-15 | 2024-03-15 | Phylogenetic analysis Sequence analysis Phylogenetic tree analysis Phylogenetic tree generation Multiple sequence alignment Phylogenetic tree reconstruction | https://usegalaxy.org | |||||
| 2020-09-06 | 2023-11-19 | Peak detection Mass spectrum visualisation Chromatogram visualisation Validation Chromatographic alignment Filtering Label-free quantification | AnalyticalDevelopment LiquidChromatography-HighResolutionMassSpectrometry Chemometrics SoilMetabolomics Pesticides UntargetedAnalysis UntargetedMetabolicProfiling | https://usegalaxy.fr | ||||
| 2019-10-30 | 2019-10-30 | Peak detection Mass spectrum visualisation Chromatogram visualisation Validation Chromatographic alignment Filtering Label-free quantification | Metabolomics lcms | https://usegalaxy.org.au | ||||
| 2019-10-30 | 2019-10-30 | Metabolomics LCMS | https://usegalaxy.org.au | |||||
| 2023-11-24 | 2024-07-13 | MIT | Peak detection Mass spectrum visualisation Chromatogram visualisation Validation Chromatographic alignment Filtering Label-free quantification | GTN LC-MS MS Metabolomics workflow4metabolomics xcms | WorkflowHub | |||
| 2024-04-10 | 2024-04-11 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2019-10-14 | 2019-10-14 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Sequence annotation RNA-Seq analysis Transcriptome assembly Read summarisation Sequencing quality control | https://usegalaxy.org | |||||
| 2023-05-19 | 2023-05-19 | Sequence contamination filtering Statistical calculation Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2011-11-16 | 2011-11-16 | https://usegalaxy.org | ||||||
| 2019-05-14 | 2020-05-19 | https://usegalaxy.eu | ||||||
| 2019-05-14 | 2020-05-19 | https://usegalaxy.eu | ||||||
| 2019-05-14 | 2020-05-19 | https://usegalaxy.eu | ||||||
| 2019-05-14 | 2020-05-19 | https://usegalaxy.eu | ||||||
| 2020-05-19 | 2020-05-19 | https://usegalaxy.eu | ||||||
| 2014-09-10 | 2014-09-10 | https://usegalaxy.org | ||||||
| 2014-09-10 | 2014-09-10 | https://usegalaxy.org | ||||||
| 2021-09-29 | 2023-01-16 | notspecified | WorkflowHub | |||||
| 2024-10-16 | 2024-10-17 | CC-BY-4.0 | RNA-Seq analysis Transcriptome assembly Classification Annotation Sequence annotation | https://usegalaxy.eu | ||||
| 2024-08-29 | 2024-09-01 | CC-BY-4.0 | name:single-cell name:training | https://usegalaxy.eu | ||||
| 2024-08-30 | 2024-09-01 | CC-BY-4.0 | Differential gene expression analysis | name:single-cell name:training name:public-data | https://usegalaxy.eu | |||
| 2024-09-20 | 2024-09-20 | CC-BY-4.0 | Differential gene expression analysis | name:single-cell name:training name:public-data | https://usegalaxy.eu | |||
| 2023-06-08 | 2023-07-13 | https://usegalaxy.eu | ||||||
| 2023-07-05 | 2023-07-13 | https://usegalaxy.eu | ||||||
| 2023-07-05 | 2023-07-13 | https://usegalaxy.eu | ||||||
| 2023-05-04 | 2023-07-13 | https://usegalaxy.eu | ||||||
| 2020-05-19 | 2020-05-19 | https://usegalaxy.eu | ||||||
| 2020-05-19 | 2020-05-19 | https://usegalaxy.eu | ||||||
| 2022-11-09 | 2022-11-10 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Sequence trimming Transcriptome assembly Read pre-processing Sequence assembly validation | vgp assembly hifi hifiasm | https://usegalaxy.org.au | |||
| 2022-11-09 | 2022-11-10 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Primer removal Scaffolding Sequence trimming Transcriptome assembly Read pre-processing Sequence assembly validation | vgp assembly hi-c hifiasm | https://usegalaxy.org.au | |||
| 2021-03-08 | 2021-03-21 | SV_calling | https://usegalaxy.org.au | |||||
| 2021-03-21 | 2021-03-22 | Sequence visualisation | SV_calling | https://usegalaxy.org.au | ||||
| 2021-03-14 | 2021-04-28 | Pairwise sequence alignment Sequencing quality control Sequence analysis Formatting Box-Whisker plot plotting Structural variation detection Filtering Scatter plot plotting | SV_calling | https://usegalaxy.org.au | ||||
| 2021-03-08 | 2021-03-22 | Pairwise sequence alignment Sequencing quality control Sequence analysis Sequence visualisation Box-Whisker plot plotting Structural variation detection Filtering Scatter plot plotting | SV_calling | https://usegalaxy.org.au | ||||
| 2024-10-03 | 2024-10-03 | MachineLearning LORIS LogisticRegression MLModel | https://usegalaxy.org | |||||
| 2023-11-14 | 2023-11-14 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.fr | |||||
| 2020-09-15 | 2021-01-20 | Statistical calculation Genome visualisation Data handling Genome assembly De-novo assembly Genome indexing Sequence composition calculation Read mapping Pairwise sequence alignment Sequence contamination filtering Generation Cross-assembly Mapping assembly Sequence file editing Sequence assembly visualisation Sequence alignment Sequencing quality control | https://usegalaxy.eu | |||||
| 2021-03-16 | 2021-03-17 | Visualisation Prediction and recognition | https://usegalaxy.eu | |||||
| 2024-09-08 | 2024-09-08 | MIT | Statistical calculation Taxonomic classification Sequence composition calculation Aggregation Sequence contamination filtering Visualisation Box-Whisker plot plotting Sequencing quality control Scatter plot plotting | Microbiome | https://usegalaxy.eu | |||
| 2023-12-14 | 2023-12-14 | MIT | Statistical calculation Genome visualisation Taxonomic classification Phylogenetic tree generation Sequence composition calculation Phylogenetic tree visualisation Variant calling Validation Antimicrobial resistance prediction Sequencing quality control | variant-analysis prokaryote name:microGalaxy | https://usegalaxy.eu | |||
| 2023-06-07 | 2023-06-12 | Statistical calculation Genome visualisation Taxonomic classification Phylogenetic tree generation Sequence composition calculation Phylogenetic tree visualisation Variant calling Validation Antimicrobial resistance prediction Sequencing quality control | variant-analysis prokaryote galaxy-training-network | https://usegalaxy.org.au | ||||
| 2020-08-31 | 2020-08-31 | Statistical calculation Genome visualisation Taxonomic classification Phylogenetic tree generation Sequence composition calculation Phylogenetic tree visualisation Variant calling Validation Antimicrobial resistance prediction Sequencing quality control | variant-analysis prokaryote galaxy-training-network | https://usegalaxy.org.au | ||||
| 2011-05-05 | 2011-06-29 | https://usegalaxy.org | ||||||
| 2020-04-09 | 2020-04-09 | ml statistics galaxy-training-network | https://usegalaxy.org.au | |||||
| 2020-01-09 | 2020-01-09 | ml | https://usegalaxy.eu | |||||
| 2020-01-09 | 2020-01-09 | ml | https://usegalaxy.eu | |||||
| 2012-01-06 | 2012-01-19 | https://usegalaxy.org | ||||||
| 2013-02-07 | 2013-02-07 | https://usegalaxy.eu | ||||||
| 2013-09-10 | 2013-09-10 | ChIP MACS | https://usegalaxy.org | |||||
| 2024-04-19 | 2024-04-19 | Validation Formatting Peak calling Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | BMMB582 | https://usegalaxy.org | ||||
| 2019-05-03 | 2019-05-03 | Multiple sequence alignment | https://usegalaxy.eu | |||||
| 2017-05-25 | 2017-05-30 | https://usegalaxy.org | ||||||
| 2024-10-18 | 2024-10-18 | Genome annotation Sequence clustering Sequence assembly Read mapping Read binning | https://usegalaxy.eu | |||||
| 2023-11-15 | 2024-07-11 | Genome comparison Statistical calculation Genome assembly Local alignment Sequence composition calculation Read mapping Read binning Validation Genome annotation Visualisation Sequence clustering Sequence assembly Sequence assembly validation Sequencing quality control | name:microGalaxy | https://usegalaxy.eu | ||||
| 2023-05-19 | 2023-05-19 | Read mapping | https://usegalaxy.eu | |||||
| 2019-03-29 | 2022-06-16 | Peak calling Read mapping Enrichment analysis Gene regulatory network analysis | Chipseq | https://usegalaxy.org | ||||
| 2023-08-08 | 2023-08-08 | https://usegalaxy.eu | ||||||
| 2023-12-14 | 2023-12-14 | MIT | name:microGalaxy | https://usegalaxy.eu | ||||
| 2023-08-24 | 2023-11-07 | microbiome | https://usegalaxy.eu | |||||
| 2011-08-02 | 2011-08-03 | https://usegalaxy.org | ||||||
| 2011-06-28 | 2011-06-28 | https://usegalaxy.org | ||||||
| 2024-01-27 | 2024-03-05 | Pairwise sequence alignment | https://usegalaxy.eu | |||||
| 2021-03-19 | 2021-03-19 | Sequence trimming Data handling Sequence file editing Read pre-processing Read mapping Primer removal | contributing galaxy-training-network | https://usegalaxy.org.au | ||||
| 2017-01-11 | 2017-01-12 | https://usegalaxy.org | ||||||
| 2024-04-23 | 2024-05-05 | Visualisation Image annotation Data handling Image analysis | imageanaylsis threshold preprocessing | https://usegalaxy.eu | ||||
| 2013-10-14 | 2013-10-14 | KEGG pathway gene mapping human | https://usegalaxy.org | |||||
| 2018-05-30 | 2018-06-06 | Mapping Read mapping Data handling | https://usegalaxy.org | |||||
| 2023-05-15 | 2023-05-15 | https://usegalaxy.eu | ||||||
| 2020-05-02 | 2020-05-02 | Validation Statistical calculation Sequence trimming Sequence composition calculation Read pre-processing Read mapping Primer removal Sequencing quality control | https://usegalaxy.org | |||||
| 2020-04-17 | 2020-08-31 | variant-analysis galaxy-training-network | https://usegalaxy.org.au | |||||
| 2010-06-22 | 2010-06-24 | https://usegalaxy.org | ||||||
| 2021-09-24 | 2021-09-24 | Genome indexing Generation Mapping Read mapping Sequence alignment | Fasta NGS Genome Draft | https://usegalaxy.org | ||||
| 2024-05-17 | 2024-09-26 | MIT | Analysis Visualisation | https://usegalaxy.eu | ||||
| 2024-08-21 | 2024-08-21 | CC-BY-4.0 | Marine biology | Earth-system Marine omics Ocean | WorkflowHub | |||
| 2024-08-09 | 2024-08-09 | CC-BY-4.0 | Protein feature detection Genome annotation Sequence motif recognition | earth-system Ocean Marineomics | https://usegalaxy.eu | |||
| 2024-01-26 | 2024-10-18 | CC-BY-4.0 | Ocean Marineomics earth-system | https://usegalaxy.eu | ||||
| 2024-02-15 | 2024-02-15 | Apache-2.0 | Genome annotation Editing RNA-Seq analysis | genome-annotation | WorkflowHub | |||
| 2024-10-17 | 2024-10-17 | MIT | Peak detection Mass spectrum visualisation Chromatogram visualisation Validation Chromatographic alignment Filtering Label-free quantification | metabolomics MS workflow4metabolomics GC-MS GTN metaMS | https://usegalaxy.eu | |||
| 2020-01-09 | 2021-04-23 | Peak detection Mass spectrum visualisation Chromatogram visualisation Validation Chromatographic alignment Filtering Label-free quantification | metabolomics gtn lcms | https://usegalaxy.fr | ||||
| 2024-09-19 | 2024-09-19 | MIT | Peak detection Mass spectrum visualisation Chromatogram visualisation Validation Chromatographic alignment Filtering Label-free quantification | metabolomics MS LC-MS workflow4metabolomics xcms GTN | https://usegalaxy.org | |||
| 2022-02-04 | 2022-02-05 | RNA-Seq analysis | https://usegalaxy.eu | |||||
| 2022-06-25 | 2022-06-29 | https://usegalaxy.eu | ||||||
| 2020-08-31 | 2020-08-31 | Statistical calculation Heat map generation Standardisation and normalisation Protein quantification Visualisation Imputation Clustering Principal component plotting | proteomics galaxy-training-network | https://usegalaxy.org.au | ||||
| 2020-11-04 | 2023-02-13 | Apache-2.0 | Sequence contamination filtering Genome assembly Read mapping Aggregation Sequencing quality control | covid-19 | WorkflowHub | |||
| 2018-12-14 | 2018-12-14 | analysis moleculardynamics bio3d | https://usegalaxy.eu | |||||
| 2021-03-19 | 2021-03-19 | cheminformatics moleculardynamics computational-chemistry galaxy-training-network | https://usegalaxy.org.au | |||||
| 2021-05-18 | 2021-06-14 | cheminformatics moleculardynamics computational-chemistry | https://usegalaxy.eu | |||||
| 2024-04-18 | 2024-04-22 | Validation Sequence contamination filtering Data handling Genome indexing Generation Read mapping Sequence alignment Sequencing quality control | BMB554-USE-THIS | https://usegalaxy.org | ||||
| 2019-09-23 | 2019-09-23 | peters meinbio | https://usegalaxy.eu | |||||
| 2021-09-02 | 2023-12-03 | AGPL-3.0-or-later | https://usegalaxy.eu | |||||
| 2022-05-24 | 2022-05-24 | Phylogenetic analysis Taxonomic classification Phylogenetic inference Species frequency estimation Phylogenetic tree visualisation Phylogenetic tree analysis Conversion Nucleic acid sequence analysis Phylogenetic tree editing | https://usegalaxy.eu | |||||
| 2012-12-07 | 2012-12-07 | https://usegalaxy.org | ||||||
| 2022-11-09 | 2022-11-10 | CC-BY-4.0 | vgp assembly hifi meryl genome_profiling | https://usegalaxy.org.au | ||||
| 2024-02-26 | 2024-03-04 | https://usegalaxy.fr | ||||||
| 2023-11-23 | 2023-11-23 | https://usegalaxy.eu | ||||||
| 2019-12-11 | 2020-03-20 | Sequence database search Statistical calculation Formatting Sequence profile generation Format validation Sequence motif recognition Primer removal Coding region prediction Data retrieval Sequence assembly Sequencing quality control Protein feature detection Taxonomic classification Genome assembly Sequence composition calculation Database search Sequence trimming Gene prediction Conversion Probabilistic sequence generation Sequence generation Multiple sequence alignment Read pre-processing | https://usegalaxy.eu | |||||
| 2023-12-14 | 2023-12-14 | Sequence database search Statistical calculation Formatting Sequence profile generation Format validation Sequence motif recognition Primer removal Coding region prediction Data retrieval Sequence assembly Sequence assembly validation Sequencing quality control Protein feature detection Taxonomic classification Gene functional annotation Local alignment Sequence composition calculation Database search Validation Sequence analysis Visualisation Sequence trimming Conversion Probabilistic sequence generation Gene prediction Sequence generation Multiple sequence alignment Read pre-processing | name:microgalaxy | https://usegalaxy.eu | ||||
| 2023-02-10 | 2023-03-16 | Sequence database search Statistical calculation Formatting Sequence profile generation Format validation Sequence motif recognition Primer removal Coding region prediction Data retrieval Sequence assembly Sequence assembly validation Sequencing quality control Protein feature detection Taxonomic classification Gene functional annotation Local alignment Sequence composition calculation Database search Validation Sequence analysis Visualisation Sequence trimming Conversion Probabilistic sequence generation Gene prediction Sequence generation Multiple sequence alignment Read pre-processing | name:microgalaxy | https://usegalaxy.eu | ||||
| 2023-03-29 | 2023-04-14 | Sequence database search Formatting Sequence profile generation Statistical calculation Format validation Sequence motif recognition Coding region prediction Data retrieval Sequence assembly Sequence assembly validation Sequencing quality control Protein feature detection Taxonomic classification Gene functional annotation Sequence composition calculation Database search Validation Sequence analysis Conversion Probabilistic sequence generation Multiple sequence alignment Sequence generation Gene prediction | https://usegalaxy.eu | |||||
| 2020-01-22 | 2020-04-21 | Sequencing quality control Genome visualisation Taxonomic classification Genome assembly Multilocus sequence typing Coding region prediction Pairwise sequence alignment Genome annotation Visualisation Antimicrobial resistance prediction Box-Whisker plot plotting Mapping assembly Gene prediction Filtering Sequence assembly visualisation Sequence assembly validation Scatter plot plotting | Long_Read Metagenomics Assembly AMR Taxonomy Gene_Annotation Long_Read | https://usegalaxy.eu | ||||
| 2020-01-24 | 2020-02-10 | De-novo assembly Coding region prediction Pairwise sequence alignment Genome annotation Antimicrobial resistance prediction Box-Whisker plot plotting Filtering Sequence assembly visualisation Sequence assembly validation Sequencing quality control Genome visualisation Taxonomic classification Genome assembly Visualisation Scatter plot plotting Cross-assembly Mapping assembly Gene prediction Multilocus sequence typing | Nanopore Metagenomics ONT | https://usegalaxy.eu | ||||
| 2020-01-31 | 2020-02-10 | De-novo assembly Coding region prediction Pairwise sequence alignment Genome annotation Antimicrobial resistance prediction Box-Whisker plot plotting Filtering Sequence assembly visualisation Sequence assembly validation Sequencing quality control Genome visualisation Taxonomic classification Genome assembly Visualisation Scatter plot plotting Cross-assembly Mapping assembly Gene prediction Multilocus sequence typing | Nanopore Metagenomics ONT | https://usegalaxy.eu | ||||
| 2022-11-18 | 2022-12-09 | Sequence analysis Antimicrobial resistance prediction Box-Whisker plot plotting Structural variation detection Scatter plot plotting | https://usegalaxy.eu | |||||
| 2021-12-03 | 2021-12-03 | Statistical calculation Taxonomic classification Genome assembly De-novo assembly Sequence composition calculation Pairwise sequence alignment Visualisation Cross-assembly Mapping assembly Sequence assembly visualisation Sequence assembly validation Sequencing quality control | https://usegalaxy.eu | |||||
| 2011-05-27 | 2011-06-30 | ID mapping Phylogenetic tree visualisation Database search | https://usegalaxy.org | |||||
| 2011-06-14 | 2011-06-14 | ID mapping Phylogenetic tree visualisation Database search | https://usegalaxy.org | |||||
| 2015-11-29 | 2015-11-29 | ID mapping Phylogenetic tree visualisation Database search | https://usegalaxy.org | |||||
| 2021-01-04 | 2021-03-31 | Statistical calculation Taxonomic classification Genome assembly Sequence composition calculation Coding region prediction Sequence analysis Genome annotation Gene prediction Sequence assembly Sequencing quality control | https://usegalaxy.org | |||||
| 2023-12-14 | 2023-12-14 | Visualisation Genome assembly Sequence assembly visualisation Read mapping Sequence assembly validation | name:microGalaxy | https://usegalaxy.eu | ||||
| 2023-12-14 | 2023-12-14 | Statistical calculation Heat map generation Standardisation and normalisation Protein quantification Visualisation Imputation Clustering Principal component plotting | name:microgalaxy | https://usegalaxy.eu | ||||
| 2020-01-30 | 2023-03-16 | Statistical calculation Heat map generation Standardisation and normalisation Protein quantification Visualisation Imputation Clustering Principal component plotting | name:microgalaxy | https://usegalaxy.eu | ||||
| 2023-10-19 | 2023-10-19 | MIT | https://usegalaxy.eu | |||||
| 2024-03-28 | 2024-03-28 | MIT | https://usegalaxy.org | |||||
| 2024-09-19 | 2024-09-19 | MIT | https://usegalaxy.eu | |||||
| 2024-09-19 | 2024-09-19 | MIT | https://usegalaxy.org | |||||
| 2024-06-27 | 2024-06-27 | MIT | https://usegalaxy.org | |||||
| 2018-11-13 | 2018-11-19 | Visualisation Prediction and recognition | https://usegalaxy.eu | |||||
| 2018-11-19 | 2018-11-19 | Visualisation Prediction and recognition | https://usegalaxy.eu | |||||
| 2018-11-13 | 2018-11-13 | Visualisation Prediction and recognition | https://usegalaxy.eu | |||||
| 2023-12-14 | 2023-12-14 | Visualisation Prediction and recognition | proteomics name:microGalaxy | https://usegalaxy.eu | ||||
| 2021-02-05 | 2021-11-14 | Visualisation Prediction and recognition | https://usegalaxy.eu | |||||
| 2021-02-04 | 2021-02-09 | Visualisation Prediction and recognition | name:metaproteomics name:galaxyp | https://usegalaxy.eu | ||||
| 2021-03-19 | 2021-03-19 | Visualisation Prediction and recognition | proteomics galaxy-training-network | https://usegalaxy.org.au | ||||
| 2023-04-11 | 2023-04-11 | Visualisation Prediction and recognition | https://usegalaxy.eu | |||||
| 2022-08-28 | 2022-08-28 | Visualisation Prediction and recognition | https://usegalaxy.eu | |||||
| 2023-12-14 | 2023-12-14 | Query and retrieval Statistical inference Quantification Filtering Indexing Heat map generation Functional clustering Visualisation Differential protein expression analysis Principal component visualisation | proteomics name:microGalaxy | https://usegalaxy.eu | ||||
| 2021-11-09 | 2021-11-09 | Query and retrieval Statistical inference Quantification Filtering Indexing Heat map generation Functional clustering Visualisation Differential protein expression analysis Principal component visualisation | proteomics | https://usegalaxy.eu | ||||
| 2021-03-19 | 2021-03-19 | Query and retrieval Statistical inference Quantification Filtering Indexing Heat map generation Functional clustering Visualisation Differential protein expression analysis Principal component visualisation | proteomics galaxy-training-network | https://usegalaxy.org.au | ||||
| 2023-12-14 | 2023-12-14 | Query and retrieval Statistical inference Quantification Filtering Indexing Heat map generation Functional clustering Visualisation Differential protein expression analysis Principal component visualisation | proteomics name:microGalaxy | https://usegalaxy.eu | ||||
| 2021-11-09 | 2021-11-09 | Query and retrieval Statistical inference Quantification Filtering Indexing Heat map generation Functional clustering Visualisation Differential protein expression analysis Principal component visualisation | proteomics | https://usegalaxy.eu | ||||
| 2021-03-19 | 2021-03-19 | Query and retrieval Statistical inference Quantification Filtering Indexing Heat map generation Functional clustering Visualisation Differential protein expression analysis Principal component visualisation | proteomics galaxy-training-network | https://usegalaxy.org.au | ||||
| 2023-12-14 | 2024-06-19 | Formatting Visualisation Prediction and recognition Filtering Label-free quantification | proteomics name:microGalaxy | https://usegalaxy.eu | ||||
| 2021-11-09 | 2021-11-09 | Formatting Visualisation Prediction and recognition Filtering Label-free quantification | https://usegalaxy.eu | |||||
| 2023-07-10 | 2023-07-10 | CC-BY-4.0 | Metadata FAIR Data Paper | https://usegalaxy.eu | ||||
| 2023-12-14 | 2023-12-14 | Statistical calculation Sequence alignment analysis Gene expression profiling Sequence composition calculation Sequence comparison Primer removal Sequence trimming Read pre-processing Sequence similarity search Sequencing quality control | name:microgalaxy | https://usegalaxy.eu | ||||
| 2020-01-27 | 2023-02-27 | Statistical calculation Sequence alignment analysis Gene expression profiling Sequence composition calculation Sequence comparison Primer removal Sequence trimming Read pre-processing Sequence similarity search Sequencing quality control | name:microgalaxy | https://usegalaxy.eu | ||||
| 2022-05-24 | 2022-05-24 | Statistical calculation Phylogenetic analysis Sequence alignment analysis Phylogenetic inference Primer removal Species frequency estimation Sequence similarity search Sequencing quality control Taxonomic classification Sequence composition calculation Sequence comparison Phylogenetic tree visualisation Validation Sequence trimming Visualisation Phylogenetic tree analysis Conversion Read pre-processing Nucleic acid sequence analysis Phylogenetic tree editing | xy | https://usegalaxy.eu | ||||
| 2021-05-25 | 2021-05-25 | Taxonomic classification Phylogenetic inference Phylogenetic tree visualisation Visualisation Conversion Phylogenetic tree analysis Nucleic acid sequence analysis Phylogenetic tree editing | metagenomics | https://usegalaxy.eu | ||||
| 2021-10-18 | 2021-10-18 | Statistical calculation Formatting Taxonomic classification Genome indexing Sequence composition calculation Read mapping Visualisation Generation Sequence alignment Sequencing quality control | metatranscriptomics Kraken RNA-seq microbiome | https://usegalaxy.eu | ||||
| 2021-10-18 | 2021-10-18 | Statistical calculation Formatting Taxonomic classification Genome indexing Sequence composition calculation Read mapping Visualisation Generation Sequence alignment Sequencing quality control | metatranscriptomics Kraken RNA-seq microbiome | https://usegalaxy.org | ||||
| 2021-05-25 | 2021-05-25 | Statistical calculation Sequence alignment analysis Sequence composition calculation Sequence comparison Primer removal Validation Sequence trimming Read pre-processing Sequence similarity search Sequencing quality control | metagenomics | https://usegalaxy.eu | ||||
| 2021-05-25 | 2021-11-09 | Phylogenetic analysis Taxonomic classification Species frequency estimation | metagenomics | https://usegalaxy.eu | ||||
| 2021-05-25 | 2021-11-09 | Phylogenetic analysis Taxonomic classification Species frequency estimation | metagenomics | https://usegalaxy.eu | ||||
| 2024-04-25 | 2024-04-25 | Sequence database search Statistical calculation Formatting Sequence profile generation Format validation Sequence motif recognition Primer removal Aggregation Coding region prediction Sequence assembly Data retrieval Sequence assembly validation Sequencing quality control Protein feature detection Taxonomic classification Gene functional annotation Local alignment Sequence composition calculation Database search Validation Sequence trimming Visualisation Sequence analysis Conversion Probabilistic sequence generation Multiple sequence alignment Sequence generation Gene prediction Read pre-processing | https://usegalaxy.eu | |||||
| 2013-04-18 | 2013-04-19 | https://usegalaxy.org | ||||||
| 2013-09-25 | 2013-09-26 | https://usegalaxy.eu | ||||||
| 2014-06-15 | 2014-06-17 | https://usegalaxy.org | ||||||
| 2020-12-28 | 2020-12-28 | Visualisation Prediction and recognition | https://usegalaxy.eu | |||||
| 2023-12-13 | 2023-12-13 | Statistical calculation Data handling Sequence composition calculation Sequence merging Validation Sequence contamination filtering Sequence trimming Read pre-processing Sequencing quality control | MGnify_Amplicon_Showcase name:microGalaxy | https://usegalaxy.eu | ||||
| 2023-12-12 | 2023-12-13 | Formatting Visualisation k-mer counting Nucleic acid feature detection Comparison Alignment Mapping | MGnify_Amplicon_Showcase name:microGalaxy | https://usegalaxy.eu | ||||
| 2024-05-22 | 2024-09-27 | MIT | MGnify_Amplicon amplicon metagenomics | https://usegalaxy.eu | ||||
| 2023-10-10 | 2024-03-15 | name:microGalaxy | https://usegalaxy.eu | |||||
| 2024-05-06 | 2024-08-21 | Apache-2.0 | Data handling | MGnify_Amplicon metagenomics amplicon | https://usegalaxy.eu | |||
| 2024-05-06 | 2024-08-21 | Apache-2.0 | Mapping Formatting Visualisation k-mer counting | MGnify_Amplicon amplicon metagenomics | https://usegalaxy.eu | |||
| 2024-05-27 | 2024-08-21 | Apache-2.0 | Validation Sequence contamination filtering Statistical calculation Sequence trimming Sequence composition calculation Read pre-processing Nucleic acid design Sequencing quality control | MGnify_Amplicon amplicon metagenomics | https://usegalaxy.eu | |||
| 2024-03-25 | 2024-08-21 | Apache-2.0 | Validation Sequence contamination filtering Statistical calculation Sequence trimming Sequence composition calculation Read pre-processing Sequencing quality control | MGnify_Amplicon amplicon metagenomics | https://usegalaxy.eu | |||
| 2024-05-06 | 2024-08-21 | Apache-2.0 | Formatting Visualisation k-mer counting Nucleic acid feature detection Comparison Alignment Mapping | MGnify_Amplicon metagenomics amplicon | https://usegalaxy.eu | |||
| 2024-10-07 | 2024-10-07 | Phylogenetic tree generation (maximum likelihood and Bayesian methods) Phylogenetic tree analysis Phylogenetic tree generation Phylogenetic tree generation (from molecular sequences) Phylogenetic tree reconstruction | https://usegalaxy.eu | |||||
| 2023-05-19 | 2023-05-19 | Sequence contamination filtering Statistical calculation Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2022-02-22 | 2022-02-22 | https://usegalaxy.eu | ||||||
| 2023-12-14 | 2023-12-14 | Phylogenetic tree visualisation Genome visualisation Variant calling Phylogenetic tree generation | variant-analysis name:microGalaxy | https://usegalaxy.eu | ||||
| 2020-04-17 | 2020-08-31 | Phylogenetic tree visualisation Genome visualisation Variant calling Phylogenetic tree generation | variant-analysis galaxy-training-network | https://usegalaxy.org.au | ||||
| 2022-11-02 | 2022-11-09 | Phylogenetic tree visualisation Genome visualisation Variant calling Phylogenetic tree generation | variant-analysis | https://usegalaxy.eu | ||||
| 2024-08-11 | 2024-09-23 | Taxonomic classification Phylogenetic inference Phylogenetic tree visualisation Visualisation Conversion Phylogenetic tree analysis Nucleic acid sequence analysis Phylogenetic tree editing | https://usegalaxy.eu | |||||
| 2018-05-15 | 2019-03-25 | Statistical calculation Sequence trimming RNA-Seq quantification Sequence composition calculation Read pre-processing Read summarisation Primer removal Sequencing quality control | https://usegalaxy.org | |||||
| 2021-04-15 | 2021-04-15 | MIRACUM | https://usegalaxy.eu | |||||
| 2021-04-15 | 2021-11-09 | Statistical calculation Genome alignment Sequence composition calculation Genome indexing Read mapping Variant calling Validation Copy number estimation Generation Sequencing quality control Sequence alignment Sequence visualisation | MIRACUM | https://usegalaxy.eu | ||||
| 2022-10-15 | 2022-10-15 | Sequence visualisation Statistical calculation SNP annotation Genome alignment Sequence composition calculation Genome indexing Read mapping Variant calling Validation Copy number estimation Generation Sequence alignment Sequencing quality control | MIRACUM | https://usegalaxy.eu | ||||
| 2021-11-10 | 2022-03-18 | Statistical calculation Genome alignment Sequence composition calculation Genome indexing Read mapping Variant calling Validation Copy number estimation Generation Sequencing quality control Sequence alignment Sequence visualisation | MIRACUM | https://usegalaxy.eu | ||||
| 2021-04-15 | 2021-07-29 | Statistical calculation Genome indexing Sequence composition calculation Mapping Read mapping Validation Variant calling Generation Sequence alignment Sequencing quality control | MIRACUM | https://usegalaxy.eu | ||||
| 2021-12-13 | 2021-12-13 | Sequence contamination filtering Sequence trimming Read pre-processing Primer removal Sequencing quality control | https://usegalaxy.org | |||||
| 2023-10-18 | 2023-10-20 | Statistical calculation RNA-Seq quantification Sequence composition calculation Read mapping Primer removal Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | miRNA | https://usegalaxy.eu | ||||
| 2013-01-29 | 2013-01-29 | https://usegalaxy.org | ||||||
| 2011-06-14 | 2011-06-21 | https://usegalaxy.org | ||||||
| 2023-07-05 | 2023-07-19 | Peak detection Mass spectrum visualisation Chromatogram visualisation Validation Chromatographic alignment Filtering Label-free quantification | https://usegalaxy.fr | |||||
| 2021-12-14 | 2023-01-27 | MIT | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.eu | ||||
| 2021-12-09 | 2021-12-20 | Genome annotation Sequence visualisation | https://usegalaxy.eu | |||||
| 2024-02-08 | 2024-02-08 | CC-BY-4.0 | Reviewed VGP | https://usegalaxy.eu | ||||
| 2024-02-08 | 2024-02-08 | CC-BY-4.0 | Reviewed VGP | https://usegalaxy.org | ||||
| 2024-02-22 | 2024-02-22 | CC-BY-4.0 | Reviewed VGP | https://usegalaxy.org.au | ||||
| 2024-02-08 | 2024-06-13 | CC-BY-4.0 | Reviewed vgp | WorkflowHub | ||||
| 2021-12-09 | 2022-06-10 | Genome annotation Sequence visualisation | https://usegalaxy.eu | |||||
| 2022-06-06 | 2023-02-13 | CC-BY-4.0 | Phylogenetic analysis Sequence analysis | phylogenetics phylogenomics | WorkflowHub | |||
| 2020-08-31 | 2020-08-31 | statistics classification ml cheminformatics galaxy-training-network | https://usegalaxy.org.au | |||||
| 2022-03-18 | 2022-03-18 | MIT | https://usegalaxy.eu | |||||
| 2022-06-30 | 2022-06-30 | MIT | https://usegalaxy.org | |||||
| 2022-03-18 | 2022-03-18 | MIT | https://usegalaxy.eu | |||||
| 2022-06-30 | 2022-06-30 | MIT | https://usegalaxy.org | |||||
| 2023-11-30 | 2023-11-30 | MIT | https://usegalaxy.eu | |||||
| 2023-11-30 | 2023-11-30 | MIT | https://usegalaxy.org | |||||
| 2023-11-30 | 2023-11-30 | MIT | https://usegalaxy.eu | |||||
| 2023-11-30 | 2023-11-30 | MIT | https://usegalaxy.org | |||||
| 2022-11-22 | 2022-12-12 | Validation Sequence contamination filtering Sequencing quality control | name:IRIS name:PE name:QC | https://usegalaxy.eu | ||||
| 2023-06-02 | 2023-06-05 | Read summarisation Sequence alignment RNA-Seq quantification | https://usegalaxy.org | |||||
| 2021-06-18 | 2021-07-05 | https://usegalaxy.eu | ||||||
| 2018-10-09 | 2019-01-09 | moleculardynamics | https://usegalaxy.eu | |||||
| 2023-01-19 | 2023-07-22 | Statistical calculation Formatting Genome indexing Sequence composition calculation Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2022-09-19 | 2022-09-19 | name:trajectory_analysis name:transcriptomics name:scRNA-seq | https://usegalaxy.eu | |||||
| 2022-12-14 | 2023-01-16 | CC-BY-4.0 | WorkflowHub | |||||
| 2018-05-17 | 2018-05-17 | Sequence read processing Phylogenetic analysis Taxonomic classification Visualisation Sequence clustering DNA barcoding Sequencing quality control | https://usegalaxy.org | |||||
| 2023-02-27 | 2023-02-28 | Sequence read processing Phylogenetic analysis Taxonomic classification Visualisation Sequence clustering DNA barcoding Sequencing quality control | https://usegalaxy.org | |||||
| 2021-11-22 | 2022-01-26 | Mapping Sequence motif discovery | ATAC chiara | https://usegalaxy.eu | ||||
| 2023-05-19 | 2023-05-19 | https://usegalaxy.eu | ||||||
| 2018-11-13 | 2019-03-29 | Variant calling RNA-Seq analysis Transcriptome assembly Statistical calculation Sequence alignment Sequence annotation | https://usegalaxy.eu | |||||
| 2018-11-13 | 2018-11-13 | Peptide database search Conversion | https://usegalaxy.eu | |||||
| 2018-11-13 | 2018-11-13 | https://usegalaxy.eu | ||||||
| 2013-01-04 | 2015-01-26 | https://usegalaxy.org | ||||||
| 2012-12-10 | 2015-01-26 | https://usegalaxy.org | ||||||
| 2023-04-05 | 2023-04-05 | Validation Differential gene expression analysis Statistical calculation RNA-Seq analysis RNA-Seq quantification Gene expression analysis Sequence composition calculation Sequencing quality control | https://usegalaxy.org | |||||
| 2010-06-08 | 2010-06-08 | https://usegalaxy.org | ||||||
| 2023-12-06 | 2023-12-06 | GPL-3.0 | BY-COVID covid-19 | WorkflowHub | ||||
| 2023-12-19 | 2024-01-24 | GPL-3.0 | RNA-Seq analysis Annotation Gene functional annotation | BY-COVID covid-19 | WorkflowHub | |||
| 2023-12-19 | 2024-01-24 | GPL-3.0 | Statistical calculation Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Sequence trimming Read pre-processing Read summarisation Sequencing quality control | BY-COVID covid-19 | WorkflowHub | |||
| 2020-04-17 | 2020-08-31 | proteomics galaxy-training-network | https://usegalaxy.org.au | |||||
| 2023-09-23 | 2023-09-23 | Multiple sequence alignment | https://usegalaxy.org | |||||
| 2021-03-19 | 2021-03-19 | metabolomics galaxy-training-network | https://usegalaxy.org.au | |||||
| 2019-03-04 | 2019-04-26 | https://usegalaxy.eu | ||||||
| 2021-03-19 | 2021-03-19 | metabolomics galaxy-training-network | https://usegalaxy.org.au | |||||
| 2012-04-03 | 2012-04-03 | https://usegalaxy.org | ||||||
| 2023-12-14 | 2023-12-14 | Sequence analysis Phylogenetic tree analysis | evolution name:microGalaxy | https://usegalaxy.eu | ||||
| 2023-04-12 | 2023-04-12 | Sequence database search Formatting Sequence profile generation Statistical calculation Format validation Sequence motif recognition Coding region prediction Data retrieval Sequence assembly Sequence assembly validation Sequencing quality control Protein feature detection Taxonomic classification Gene functional annotation Sequence composition calculation Database search Validation Sequence analysis Conversion Probabilistic sequence generation Multiple sequence alignment Sequence generation Gene prediction | https://usegalaxy.eu | |||||
| 2022-08-22 | 2022-08-22 | https://usegalaxy.eu | ||||||
| 2020-05-19 | 2020-05-19 | https://usegalaxy.eu | ||||||
| 2020-05-19 | 2020-05-19 | https://usegalaxy.eu | ||||||
| 2018-10-04 | 2019-04-25 | Variant calling Statistical calculation Sequence composition calculation Read mapping Sequencing quality control | https://usegalaxy.org | |||||
| 2024-07-17 | 2024-08-02 | CC-BY-4.0 | scATAC-seq single-cell | WorkflowHub | ||||
| 2024-06-19 | 2024-10-03 | CC-BY-4.0 | epigenetics scATAC-seq name:single-cell | https://usegalaxy.eu | ||||
| 2022-11-14 | 2022-11-14 | name:training name:transcriptomics name:single-cell | https://usegalaxy.eu | |||||
| 2022-11-12 | 2022-11-12 | Annotation | name:transcriptomics name:training name:single-cell | https://usegalaxy.eu | ||||
| 2022-11-12 | 2022-11-12 | Annotation | name:training name:transcriptomics name:single-cell | https://usegalaxy.eu | ||||
| 2022-11-12 | 2022-11-12 | name:training name:deconvolution name:transcriptomics name:single-cell | https://usegalaxy.eu | |||||
| 2022-07-22 | 2022-08-05 | https://usegalaxy.eu | ||||||
| 2018-12-07 | 2018-12-07 | Genome indexing Generation Read mapping Sequence alignment | https://usegalaxy.org | |||||
| 2018-12-19 | 2019-11-24 | Formatting Genome indexing Generation Read mapping Sequence alignment | https://usegalaxy.org | |||||
| 2023-05-19 | 2023-05-19 | https://usegalaxy.eu | ||||||
| 2010-03-01 | 2010-03-01 | https://usegalaxy.org | ||||||
| 2022-12-27 | 2022-12-28 | Statistical calculation Data handling RNA-Seq quantification Gene expression analysis Sequence composition calculation Primer removal Sequence annotation Sequence trimming RNA-Seq analysis Read pre-processing Sequencing quality control | https://usegalaxy.org | |||||
| 2019-09-22 | 2019-09-25 | IPS | https://usegalaxy.eu | |||||
| 2022-01-05 | 2022-01-25 | Formatting Data handling Genome indexing Sequence file editing Read mapping Primer removal Sequence contamination filtering Sequence trimming Generation Read pre-processing Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2019-07-05 | 2020-03-29 | Pairwise sequence alignment Genome assembly Cross-assembly Mapping assembly De-novo assembly Aggregation | ONT | https://usegalaxy.eu | ||||
| 2024-08-06 | 2024-10-01 | Statistical calculation De-novo assembly Variant calling Antimicrobial resistance prediction Box-Whisker plot plotting Sequence assembly Sequence assembly visualisation Filtering Sequence assembly validation Sequencing quality control Parsing Data handling Base-calling Genome assembly Sequence composition calculation Multilocus sequence typing Visualisation Cross-assembly Mapping assembly Scatter plot plotting | https://usegalaxy.eu | |||||
| 2022-08-07 | 2023-01-29 | MIT | Statistical calculation Taxonomic classification Sequence composition calculation Validation Sequence contamination filtering Box-Whisker plot plotting Sequencing quality control Scatter plot plotting | microbiome nanopore | https://usegalaxy.eu | |||
| 2021-08-14 | 2024-04-24 | Base-calling Genome assembly De-novo assembly Variant calling Visualisation Box-Whisker plot plotting Cross-assembly Mapping assembly Sequence assembly Sequence assembly validation Scatter plot plotting | WGS Nanopore | https://usegalaxy.eu | ||||
| 2024-07-12 | 2024-09-16 | Pairwise sequence alignment Statistical calculation Variant calling | https://usegalaxy.eu | |||||
| 2023-02-25 | 2023-02-25 | Validation Sequence contamination filtering Statistical calculation Taxonomic classification Sequence composition calculation Sequencing quality control | MinION Nanopore | https://usegalaxy.org | ||||
| 2023-04-12 | 2024-06-24 | MIT | Statistical calculation Data handling Sequence alignment analysis Taxonomic classification Sequence composition calculation Aggregation Pairwise sequence alignment Sequence contamination filtering Validation Visualisation Box-Whisker plot plotting Sequencing quality control Scatter plot plotting | name:Collection name:microGalaxy name:PathoGFAIR name:Nanopore name:IWC | https://usegalaxy.eu | |||
| 2024-06-25 | 2024-06-25 | MIT | Statistical calculation Data handling Sequence alignment analysis Taxonomic classification Sequence composition calculation Aggregation Pairwise sequence alignment Sequence contamination filtering Validation Visualisation Box-Whisker plot plotting Sequencing quality control Scatter plot plotting | name:Collection name:microGalaxy name:PathoGFAIR name:Nanopore name:IWC | https://usegalaxy.org | |||
| 2024-06-25 | 2024-06-25 | MIT | Statistical calculation Data handling Sequence alignment analysis Taxonomic classification Sequence composition calculation Aggregation Pairwise sequence alignment Sequence contamination filtering Validation Visualisation Box-Whisker plot plotting Sequencing quality control Scatter plot plotting | name:Collection name:microGalaxy name:PathoGFAIR name:Nanopore name:IWC | https://usegalaxy.org.au | |||
| 2024-09-19 | 2024-09-19 | MIT | Statistical calculation Data handling Sequence alignment analysis Taxonomic classification Sequence composition calculation Aggregation Pairwise sequence alignment Sequence contamination filtering Validation Visualisation Box-Whisker plot plotting Sequencing quality control Scatter plot plotting | name:Collection name:microGalaxy name:PathoGFAIR name:Nanopore name:IWC | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | MIT | Statistical calculation Data handling Sequence alignment analysis Taxonomic classification Sequence composition calculation Aggregation Pairwise sequence alignment Sequence contamination filtering Validation Visualisation Box-Whisker plot plotting Sequencing quality control Scatter plot plotting | name:Collection name:microGalaxy name:PathoGFAIR name:Nanopore name:IWC | https://usegalaxy.org.au | |||
| 2020-05-22 | 2020-06-10 | Pairwise sequence alignment Sequence analysis Box-Whisker plot plotting Genome assembly Mapping assembly De-novo assembly Sequence assembly visualisation Scatter plot plotting | https://usegalaxy.eu | |||||
| 2023-11-03 | 2023-11-23 | Pairwise sequence alignment Structural variation detection Sequence analysis | structuralvariantnanopore nanopore | https://usegalaxy.eu | ||||
| 2023-11-10 | 2023-11-21 | Variant calling Structural variation detection Sequence analysis Pairwise sequence alignment | phasing nanopore | https://usegalaxy.eu | ||||
| 2024-06-26 | 2024-07-15 | MIT | Statistical calculation Data handling Sequence alignment analysis Taxonomic classification Sequence composition calculation Aggregation Pairwise sequence alignment Sequence contamination filtering Validation Visualisation Box-Whisker plot plotting Sequencing quality control Scatter plot plotting | WorkflowHub | ||||
| 2022-08-23 | 2022-08-23 | Statistical calculation Sequence trimming Sequence composition calculation Read pre-processing Primer removal Sequencing quality control | https://usegalaxy.eu | |||||
| 2022-01-05 | 2022-05-30 | RNA-Seq analysis Transcriptome assembly Data handling Sequence trimming Read pre-processing Sequence alignment Primer removal | NCBI SRA FPKM | https://usegalaxy.org | ||||
| 2023-01-03 | 2023-01-03 | https://usegalaxy.eu | ||||||
| 2022-08-23 | 2022-08-23 | Statistical calculation Sequence trimming Sequence composition calculation Read pre-processing Primer removal Sequencing quality control | https://usegalaxy.eu | |||||
| 2020-02-16 | 2020-02-16 | Phylogenetic analysis Sequence analysis Multiple sequence alignment Read mapping Sequence alignment | https://usegalaxy.org | |||||
| 2023-09-13 | 2023-09-14 | Differential gene expression analysis RNA-Seq analysis Data handling Sequence alignment analysis RNA-Seq quantification Sequence alignment Read summarisation | CPB | https://usegalaxy.org | ||||
| 2021-12-23 | 2021-12-23 | systemsbiology networkanalysis | https://usegalaxy.org | |||||
| 2019-01-17 | 2019-01-17 | Differential gene expression analysis RNA-Seq analysis Pathway or network analysis | RNA metatranscriptomics network pathway | https://usegalaxy.eu | ||||
| 2015-07-28 | 2015-12-08 | https://usegalaxy.org | ||||||
| 2015-06-24 | 2016-05-14 | Read mapping | https://usegalaxy.org | |||||
| 2023-08-01 | 2023-08-01 | Sequence composition calculation Statistical calculation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2016-05-27 | 2016-05-31 | Data handling | https://usegalaxy.org | |||||
| 2022-05-03 | 2022-06-02 | Sequence read processing Phylogenetic analysis Taxonomic classification Visualisation Sequence clustering DNA barcoding Sequencing quality control | https://usegalaxy.org | |||||
| 2022-04-01 | 2022-04-06 | Sequence composition calculation Statistical calculation Read mapping Sequencing quality control | https://usegalaxy.org | |||||
| 2016-11-10 | 2016-11-11 | Variant calling Statistical calculation Formatting Sequence composition calculation Mapping Sequencing quality control | assignment NGS Variant Calling Anton Mc Donnell WEEK8 | https://usegalaxy.org | ||||
| 2019-05-16 | 2024-06-20 | Statistical calculation Formatting Data handling Sequence alignment analysis Genome indexing Sequence composition calculation Read mapping Variant calling Validation Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2022-05-19 | 2022-09-15 | Statistical calculation Formatting Genome indexing Sequence composition calculation Read mapping Variant calling Validation Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2013-11-17 | 2013-11-17 | Variant calling Statistical calculation Sequence composition calculation Sequencing quality control | https://usegalaxy.eu | |||||
| 2019-03-04 | 2019-03-04 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2019-03-04 | 2019-03-04 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | bwa freebayes genmedmsc illumina workshop 2019-03 annovar snpeff | https://usegalaxy.org | ||||
| 2018-03-26 | 2018-03-26 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2018-03-26 | 2018-03-28 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2013-03-18 | 2013-03-18 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org | |||||
| 2023-11-25 | 2024-01-10 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2023-01-27 | 2023-02-08 | Statistical calculation Formatting Read mapping Primer removal Coding region prediction Variant calling Differential gene expression analysis Genome annotation Antimicrobial resistance prediction Sequence clustering Generation Sequencing quality control Taxonomic classification Genome indexing Sequence composition calculation Validation Sequence contamination filtering Sequence trimming Gene prediction Read pre-processing Sequence alignment | https://usegalaxy.eu | |||||
| 2019-01-10 | 2019-01-10 | Sequence composition calculation Statistical calculation Read mapping Sequencing quality control | https://usegalaxy.org | |||||
| 2013-11-29 | 2014-02-18 | https://usegalaxy.org | ||||||
| 2021-03-19 | 2021-03-19 | Formatting Data handling Genome indexing Read mapping Validation Sequence contamination filtering SNP detection Generation Sequence alignment Sequencing quality control | introductions galaxy-training-network | https://usegalaxy.org.au | ||||
| 2022-03-09 | 2022-06-21 | Validation Variant calling Statistical calculation Sequence composition calculation Read mapping Sequencing quality control | https://usegalaxy.org | |||||
| 2022-02-23 | 2022-03-15 | Variant calling Statistical calculation Formatting Sequence composition calculation Read mapping Sequencing quality control | https://usegalaxy.org | |||||
| 2016-05-26 | 2016-06-13 | Statistical calculation Peak calling Sequence composition calculation Mapping Enrichment analysis Gene regulatory network analysis Sequencing quality control | https://usegalaxy.org | |||||
| 2020-05-13 | 2020-05-15 | Validation Statistical calculation Sequence composition calculation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2012-12-10 | 2015-01-26 | https://usegalaxy.org | ||||||
| 2023-09-25 | 2024-03-13 | name:microGalaxy | https://usegalaxy.eu | |||||
| 2022-02-01 | 2022-02-02 | Statistical calculation Formatting Data handling Sequence alignment analysis Genome assembly Sequence composition calculation Sequence clustering Sequence alignment Sequencing quality control | https://usegalaxy.eu | |||||
| 2023-11-18 | 2023-11-19 | Sequence assembly visualisation Genome assembly | https://usegalaxy.org | |||||
| 2022-02-11 | 2022-02-24 | Variant calling DNA barcoding | https://usegalaxy.eu | |||||
| 2022-02-22 | 2022-02-24 | Variant calling DNA barcoding | https://usegalaxy.org | |||||
| 2015-06-26 | 2016-04-12 | aptamer SELEX | https://usegalaxy.org | |||||
| 2015-06-26 | 2018-08-14 | aptamer SELEX | https://usegalaxy.org | |||||
| 2015-06-26 | 2022-11-30 | aptamer SELEX | https://usegalaxy.org | |||||
| 2015-06-26 | 2016-02-09 | aptamer SELEX | https://usegalaxy.org | |||||
| 2015-06-26 | 2016-02-09 | aptamer SELEX | https://usegalaxy.org | |||||
| 2015-06-26 | 2021-03-31 | aptamer SELEX | https://usegalaxy.org | |||||
| 2015-03-31 | 2016-02-09 | aptamer SELEX | https://usegalaxy.org | |||||
| 2015-06-26 | 2021-03-11 | aptamer SELEX | https://usegalaxy.org | |||||
| 2015-11-18 | 2021-03-09 | https://usegalaxy.org | ||||||
| 2015-06-26 | 2016-02-09 | aptamer SELEX | https://usegalaxy.org | |||||
| 2015-06-26 | 2021-01-21 | https://usegalaxy.org | ||||||
| 2015-06-26 | 2019-02-11 | https://usegalaxy.org | ||||||
| 2015-06-26 | 2021-04-01 | https://usegalaxy.org | ||||||
| 2015-06-26 | 2021-01-21 | aptamer SELEX | https://usegalaxy.org | |||||
| 2024-09-11 | 2024-09-13 | MIT | Visualisation Image annotation Data handling Image analysis | imageanaylsis | https://usegalaxy.eu | |||
| 2020-11-03 | 2023-07-03 | Apache-2.0 | Bioimaging Imaging | Parsing Image analysis Quantification | CellProfiler Galaxy image processing imaging | WorkflowHub | ||
| 2023-11-10 | 2023-11-10 | CC-BY-4.0 | Biodiversity Ecology | WorkflowHub | ||||
| 2023-03-13 | 2023-11-10 | https://usegalaxy.eu | ||||||
| 2023-11-09 | 2023-11-09 | CC-BY-4.0 | Biodiversity Ecology Genetics Phylogenetics | Statistical calculation Sequence analysis Sequence composition calculation Sequencing quality control | WorkflowHub | |||
| 2023-11-09 | 2023-11-09 | Statistical calculation Sequence analysis Sequence composition calculation Sequencing quality control | https://usegalaxy.eu | |||||
| 2021-03-21 | 2023-07-03 | Apache-2.0 | Bioimaging Imaging | Parsing Image analysis Quantification | CellProfiler Galaxy image processing imaging | WorkflowHub | ||
| 2024-01-31 | 2024-03-25 | CC-BY-4.0 | earth-system Ocean | https://usegalaxy.eu | ||||
| 2024-10-18 | 2024-10-18 | CC-BY-4.0 | Earth-system Ocean | WorkflowHub | ||||
| 2024-08-07 | 2024-10-17 | CC-BY-4.0 | earth-system Ocean | https://usegalaxy.eu | ||||
| 2018-10-15 | 2018-10-15 | Genome visualisation Genome indexing Generation Read mapping Sequence alignment | https://usegalaxy.org.au | |||||
| 2013-07-17 | 2013-07-17 | Formatting | https://usegalaxy.org | |||||
| 2024-06-24 | 2024-06-25 | Statistical calculation Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Sequence alignment Nucleic acid sequence analysis Sequencing quality control | https://usegalaxy.org | |||||
| 2017-01-17 | 2017-01-18 | https://usegalaxy.org | ||||||
| 2017-01-11 | 2017-01-16 | https://usegalaxy.org | ||||||
| 2022-04-11 | 2022-04-11 | Peptide database search Conversion | https://usegalaxy.eu | |||||
| 2022-03-31 | 2022-04-11 | Peptide database search Conversion | name:covid19 | https://usegalaxy.eu | ||||
| 2022-04-11 | 2022-04-11 | Peptide database search Conversion | name:covid19 name:oldsgps | https://usegalaxy.eu | ||||
| 2019-02-09 | 2019-02-11 | https://usegalaxy.org | ||||||
| 2020-07-20 | 2020-08-27 | UntargetedMetabolomics Pesticidesofnaturalorigins SolidPhaseMicroextraction Headspace GasChromatography-MassSpectrometry ComplexBiopesticides | https://usegalaxy.fr | |||||
| 2020-08-05 | 2023-02-13 | MIT | Sequence assembly visualisation Aggregation Genome assembly | ONT | WorkflowHub | |||
| 2020-03-29 | 2020-03-29 | Sequence assembly visualisation Aggregation Genome assembly | ONT | https://usegalaxy.eu | ||||
| 2020-08-05 | 2023-02-13 | MIT | Pairwise sequence alignment Cross-assembly Mapping assembly Genome assembly De-novo assembly Filtering Sequencing quality control | ONT name:ONT | WorkflowHub | |||
| 2018-10-01 | 2019-05-22 | Pairwise sequence alignment Cross-assembly Mapping assembly Genome assembly De-novo assembly Filtering Sequencing quality control | name:ONT ONT | https://usegalaxy.eu | ||||
| 2019-10-22 | 2019-10-22 | Pairwise sequence alignment Sequence analysis Box-Whisker plot plotting Genome assembly Mapping assembly De-novo assembly Sequence assembly visualisation Scatter plot plotting | ONT | https://usegalaxy.eu | ||||
| 2020-08-05 | 2023-02-13 | MIT | Visualisation Taxonomic classification | ONT | WorkflowHub | |||
| 2021-05-21 | 2021-06-10 | Visualisation Taxonomic classification | ONT | https://usegalaxy.eu | ||||
| 2019-05-20 | 2020-03-29 | Visualisation Taxonomic classification | ONT | https://usegalaxy.eu | ||||
| 2019-10-23 | 2019-10-23 | Sequence trimming Genome assembly Sequence assembly visualisation Filtering Read pre-processing Primer removal Aggregation Sequencing quality control | ONT | https://usegalaxy.eu | ||||
| 2020-08-05 | 2023-02-13 | MIT | Pairwise sequence alignment | WorkflowHub | ||||
| 2018-09-30 | 2019-05-22 | Pairwise sequence alignment | https://usegalaxy.eu | |||||
| 2019-07-05 | 2020-03-29 | Pairwise sequence alignment | ONT Nanopore | https://usegalaxy.eu | ||||
| 2022-08-24 | 2023-06-08 | Base-calling Genome assembly De-novo assembly Coding region prediction Scaffolding Variant calling Genome annotation Visualisation Transcriptome assembly Box-Whisker plot plotting Cross-assembly Mapping assembly Gene prediction Sequence assembly Sequence assembly validation Scatter plot plotting | Nanopore WGS | https://usegalaxy.eu | ||||
| 2016-04-27 | 2016-05-19 | Multiple sequence alignment Sequence motif recognition Sequence cluster visualisation Sequence visualisation | https://usegalaxy.org | |||||
| 2024-06-22 | 2024-06-24 | MIT | WorkflowHub | |||||
| 2024-03-30 | 2024-03-31 | Pairwise sequence alignment Mapping | https://usegalaxy.eu | |||||
| 2022-04-19 | 2024-03-10 | Data handling Base-calling Genome assembly De-novo assembly Filtering Scaffolding Read binning Variant calling Pairwise sequence alignment Transcriptome assembly Cross-assembly Mapping assembly Sequence assembly Sequence assembly validation Sequencing quality control | https://usegalaxy.eu | |||||
| 2010-08-27 | 2011-11-18 | https://usegalaxy.org | ||||||
| 2018-06-26 | 2018-06-26 | https://usegalaxy.eu | ||||||
| 2024-02-06 | 2024-10-02 | Chlorophyll-a OSPD | https://usegalaxy.eu | |||||
| 2009-08-26 | 2014-08-20 | ID mapping Phylogenetic tree visualisation Database search | metagenomics galaxy NGS Metagenomics | https://usegalaxy.org | ||||
| 2013-02-16 | 2013-02-16 | ID mapping Phylogenetic tree visualisation Database search | https://usegalaxy.org | |||||
| 2013-02-11 | 2013-02-11 | ID mapping Phylogenetic tree visualisation Database search | https://usegalaxy.org | |||||
| 2023-05-19 | 2023-05-19 | Read mapping | https://usegalaxy.eu | |||||
| 2022-04-02 | 2022-04-02 | https://usegalaxy.org | ||||||
| 2022-04-02 | 2022-04-02 | https://usegalaxy.org | ||||||
| 2021-09-25 | 2021-09-28 | https://usegalaxy.eu | ||||||
| 2011-06-14 | 2011-06-14 | https://usegalaxy.org | ||||||
| 2012-10-13 | 2012-10-15 | https://usegalaxy.org | ||||||
| 2023-10-19 | 2023-12-26 | Statistical calculation Data handling RNA-Seq quantification Gene expression analysis Sequence composition calculation Primer removal Sequence annotation Sequence trimming RNA-Seq analysis Read pre-processing Sequencing quality control | https://usegalaxy.eu | |||||
| 2021-07-15 | 2022-09-19 | GPL-3.0-or-later | Sequence assembly visualisation | fastq hifiasm HiFi genome_assembly | https://usegalaxy.org.au | |||
| 2022-10-21 | 2023-01-30 | GPL-3.0 | Sequence assembly | Sequence assembly visualisation | FASTQ HiFi genome_assembly hifiasm | WorkflowHub | ||
| 2022-07-06 | 2023-02-10 | Read mapping Data handling | name:strandidentififier name:RNA-seq | https://usegalaxy.eu | ||||
| 2021-08-11 | 2021-08-30 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Sequence trimming Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2018-04-29 | 2018-04-29 | Sequence alignment | https://usegalaxy.eu | |||||
| 2023-06-30 | 2024-08-13 | MIT | Statistical calculation Taxonomic classification Sequence composition calculation Primer removal Aggregation Validation Analysis Sequence trimming Visualisation Sequence feature detection DNA barcoding Read pre-processing Sequencing quality control | name:microGalaxy name:16s name:metagenomics name:pallori | https://usegalaxy.eu | |||
| 2023-07-07 | 2023-07-07 | MIT | Phylogenetic analysis Taxonomic classification Species frequency estimation | name:microGalaxy name:metatranscriptomics name:AdaptedASiam name:functionalProfiling | https://usegalaxy.eu | |||
| 2023-07-02 | 2024-07-29 | MIT | Validation Statistical calculation Read summarisation RNA-Seq quantification Sequence composition calculation Sequence alignment Sequencing quality control | name:microGalaxy name:pallori name:BloodRNA name:UMI name:Barcode name:transcriptomics | https://usegalaxy.eu | |||
| 2024-07-16 | 2024-07-28 | MIT | Statistical calculation Genome assembly Sequence composition calculation Read mapping Validation Variant calling Visualisation Antimicrobial resistance prediction Sequencing quality control | name:pallori name:microGalaxy name:WGS | https://usegalaxy.eu | |||
| 2020-06-02 | 2020-06-22 | proteomics proteore | https://usegalaxy.fr | |||||
| 2013-09-18 | 2013-09-18 | https://usegalaxy.org | ||||||
| 2013-09-18 | 2013-09-18 | https://usegalaxy.org | ||||||
| 2021-12-29 | 2023-01-16 | MIT | Climate GTN copernicus pangeo | WorkflowHub | ||||
| 2021-12-22 | 2021-12-23 | MIT | pangeo climate big-data geosciences | https://usegalaxy.eu | ||||
| 2019-01-23 | 2019-01-23 | Sequence trimming Read mapping Primer removal Read pre-processing | RNA PAR-CLIP | https://usegalaxy.eu | ||||
| 2022-03-18 | 2022-03-18 | MIT | Data handling | https://usegalaxy.eu | ||||
| 2022-03-18 | 2022-03-18 | MIT | Data handling | https://usegalaxy.org | ||||
| 2022-03-18 | 2022-03-18 | MIT | Data handling | https://usegalaxy.org.au | ||||
| 2024-03-14 | 2024-03-14 | MIT | Data handling | https://usegalaxy.eu | ||||
| 2024-03-28 | 2024-03-28 | MIT | Data handling | https://usegalaxy.org | ||||
| 2024-03-21 | 2024-03-21 | MIT | Data handling | https://usegalaxy.org.au | ||||
| 2024-03-14 | 2024-03-14 | MIT | Data handling | https://usegalaxy.org.au | ||||
| 2024-04-11 | 2024-04-11 | MIT | Data handling | https://usegalaxy.eu | ||||
| 2024-04-11 | 2024-04-11 | MIT | Data handling | https://usegalaxy.org | ||||
| 2024-04-11 | 2024-04-11 | MIT | Data handling | https://usegalaxy.org.au | ||||
| 2024-04-18 | 2024-04-18 | MIT | Data handling | https://usegalaxy.eu | ||||
| 2024-04-18 | 2024-04-18 | MIT | Data handling | https://usegalaxy.org | ||||
| 2024-04-18 | 2024-04-18 | MIT | Data handling | https://usegalaxy.org.au | ||||
| 2024-09-19 | 2024-09-19 | MIT | Data handling | https://usegalaxy.eu | ||||
| 2024-09-19 | 2024-09-19 | MIT | Data handling | https://usegalaxy.org | ||||
| 2024-09-12 | 2024-09-12 | MIT | Data handling | https://usegalaxy.org | ||||
| 2024-09-05 | 2024-09-05 | MIT | Data handling | https://usegalaxy.org | ||||
| 2024-08-29 | 2024-08-29 | MIT | Data handling | https://usegalaxy.org | ||||
| 2024-08-22 | 2024-08-22 | MIT | Data handling | https://usegalaxy.org | ||||
| 2024-08-15 | 2024-08-15 | MIT | Data handling | https://usegalaxy.org | ||||
| 2024-08-08 | 2024-08-08 | MIT | Data handling | https://usegalaxy.org | ||||
| 2024-08-01 | 2024-08-01 | MIT | Data handling | https://usegalaxy.org | ||||
| 2024-07-25 | 2024-07-25 | MIT | Data handling | https://usegalaxy.org | ||||
| 2024-07-18 | 2024-07-18 | MIT | Data handling | https://usegalaxy.org | ||||
| 2024-07-11 | 2024-07-11 | MIT | Data handling | https://usegalaxy.org | ||||
| 2024-07-04 | 2024-07-04 | MIT | Data handling | https://usegalaxy.org | ||||
| 2024-06-27 | 2024-06-27 | MIT | Data handling | https://usegalaxy.org | ||||
| 2024-06-20 | 2024-06-20 | MIT | Data handling | https://usegalaxy.org | ||||
| 2024-06-13 | 2024-06-13 | MIT | Data handling | https://usegalaxy.org | ||||
| 2024-06-06 | 2024-06-06 | MIT | Data handling | https://usegalaxy.org | ||||
| 2024-05-30 | 2024-05-30 | MIT | Data handling | https://usegalaxy.org | ||||
| 2024-05-23 | 2024-05-23 | MIT | Data handling | https://usegalaxy.org | ||||
| 2024-05-16 | 2024-05-16 | MIT | Data handling | https://usegalaxy.org | ||||
| 2024-09-19 | 2024-09-19 | MIT | Data handling | https://usegalaxy.org.au | ||||
| 2024-09-19 | 2024-09-19 | MIT | Data handling | https://usegalaxy.eu | ||||
| 2024-09-19 | 2024-09-19 | MIT | Data handling | https://usegalaxy.org | ||||
| 2024-09-12 | 2024-09-12 | MIT | Data handling | https://usegalaxy.org | ||||
| 2024-09-05 | 2024-09-05 | MIT | Data handling | https://usegalaxy.org | ||||
| 2024-08-29 | 2024-08-29 | MIT | Data handling | https://usegalaxy.org | ||||
| 2024-08-22 | 2024-08-22 | MIT | Data handling | https://usegalaxy.org | ||||
| 2024-08-15 | 2024-08-15 | MIT | Data handling | https://usegalaxy.org | ||||
| 2024-08-08 | 2024-08-08 | MIT | Data handling | https://usegalaxy.org | ||||
| 2024-08-01 | 2024-08-01 | MIT | Data handling | https://usegalaxy.org | ||||
| 2024-07-25 | 2024-07-25 | MIT | Data handling | https://usegalaxy.org | ||||
| 2024-07-18 | 2024-07-18 | MIT | Data handling | https://usegalaxy.org | ||||
| 2024-07-11 | 2024-07-11 | MIT | Data handling | https://usegalaxy.org | ||||
| 2024-07-04 | 2024-07-04 | MIT | Data handling | https://usegalaxy.org | ||||
| 2024-06-27 | 2024-06-27 | MIT | Data handling | https://usegalaxy.org | ||||
| 2024-06-20 | 2024-06-20 | MIT | Data handling | https://usegalaxy.org | ||||
| 2024-06-13 | 2024-06-13 | MIT | Data handling | https://usegalaxy.org | ||||
| 2024-09-19 | 2024-09-19 | MIT | Data handling | https://usegalaxy.org.au | ||||
| 2022-03-18 | 2022-03-18 | MIT | Data handling | https://usegalaxy.eu | ||||
| 2022-03-18 | 2022-03-18 | MIT | Data handling | https://usegalaxy.org | ||||
| 2022-03-18 | 2022-03-18 | MIT | Data handling | https://usegalaxy.org.au | ||||
| 2022-03-18 | 2022-03-18 | MIT | Data handling | https://usegalaxy.eu | ||||
| 2022-03-18 | 2022-03-18 | MIT | Data handling | https://usegalaxy.org | ||||
| 2022-03-18 | 2022-03-18 | MIT | Data handling | https://usegalaxy.org.au | ||||
| 2023-09-07 | 2023-09-07 | MIT | Data handling | https://usegalaxy.eu | ||||
| 2023-09-07 | 2023-09-07 | MIT | Data handling | https://usegalaxy.org | ||||
| 2023-09-07 | 2023-09-07 | MIT | Data handling | https://usegalaxy.org.au | ||||
| 2023-09-14 | 2023-09-14 | MIT | Data handling | https://usegalaxy.org | ||||
| 2023-09-14 | 2023-09-14 | MIT | Data handling | https://usegalaxy.org.au | ||||
| 2023-10-05 | 2023-10-05 | MIT | Data handling | https://usegalaxy.eu | ||||
| 2023-10-05 | 2023-10-05 | MIT | Data handling | https://usegalaxy.org | ||||
| 2023-10-05 | 2023-10-05 | MIT | Data handling | https://usegalaxy.org.au | ||||
| 2023-11-23 | 2023-11-23 | MIT | Data handling | https://usegalaxy.eu | ||||
| 2023-11-23 | 2023-11-23 | MIT | Data handling | https://usegalaxy.org | ||||
| 2023-11-23 | 2023-11-23 | MIT | Data handling | https://usegalaxy.org.au | ||||
| 2023-11-23 | 2023-11-23 | MIT | Data handling | https://usegalaxy.eu | ||||
| 2023-11-23 | 2023-11-23 | MIT | Data handling | https://usegalaxy.org | ||||
| 2023-12-07 | 2023-12-07 | MIT | Data handling | https://usegalaxy.org.au | ||||
| 2023-11-30 | 2023-11-30 | MIT | Data handling | https://usegalaxy.org.au | ||||
| 2023-11-30 | 2023-11-30 | MIT | Data handling | https://usegalaxy.eu | ||||
| 2023-11-30 | 2023-11-30 | MIT | Data handling | https://usegalaxy.org | ||||
| 2023-12-07 | 2023-12-07 | MIT | Data handling | https://usegalaxy.org.au | ||||
| 2023-11-30 | 2023-11-30 | MIT | Data handling | https://usegalaxy.org.au | ||||
| 2020-03-22 | 2020-03-23 | Data handling | https://usegalaxy.eu | |||||
| 2020-07-07 | 2020-10-07 | Data handling | https://usegalaxy.org | |||||
| 2020-06-29 | 2020-06-30 | Community profiling Sequence alignment Loading | ralf | https://usegalaxy.eu | ||||
| 2024-06-11 | 2024-06-11 | MIT | Data handling | WorkflowHub | ||||
| 2020-03-24 | 2020-04-22 | https://usegalaxy.org | ||||||
| 2024-03-11 | 2024-03-11 | Pairwise sequence alignment Visualisation Taxonomic classification Box-Whisker plot plotting Scatter plot plotting | https://usegalaxy.eu | |||||
| 2020-07-20 | 2020-08-03 | Pairwise sequence alignment Visualisation Taxonomic classification Box-Whisker plot plotting Scatter plot plotting | https://usegalaxy.eu | |||||
| 2017-08-29 | 2017-08-29 | Peak calling Enrichment analysis Gene regulatory network analysis | ChIPseq tutorial | https://usegalaxy.org | ||||
| 2021-02-09 | 2021-02-09 | https://usegalaxy.eu | ||||||
| 2022-05-31 | 2023-01-30 | Apache-2.0 | Population genomics | WorkflowHub | ||||
| 2022-05-18 | 2022-05-18 | https://usegalaxy.org.au | ||||||
| 2022-05-31 | 2023-01-30 | Apache-2.0 | Population genomics | WorkflowHub | ||||
| 2022-05-18 | 2022-05-18 | https://usegalaxy.org.au | ||||||
| 2022-05-31 | 2023-01-30 | Apache-2.0 | Population genomics | Validation Sequence alignment Sequencing quality control | WorkflowHub | |||
| 2022-05-18 | 2022-05-19 | Validation Sequence alignment Sequencing quality control | https://usegalaxy.org.au | |||||
| 2022-05-31 | 2023-01-30 | Apache-2.0 | Population genomics | WorkflowHub | ||||
| 2022-05-18 | 2022-05-18 | https://usegalaxy.org.au | ||||||
| 2011-08-22 | 2011-11-04 | https://usegalaxy.org | ||||||
| 2020-05-19 | 2020-05-19 | https://usegalaxy.eu | ||||||
| 2020-05-19 | 2020-05-19 | https://usegalaxy.eu | ||||||
| 2024-09-26 | 2024-09-26 | https://usegalaxy.cz | ||||||
| 2024-09-26 | 2024-09-26 | https://usegalaxy.cz | ||||||
| 2024-09-26 | 2024-09-26 | https://usegalaxy.cz | ||||||
| 2024-09-26 | 2024-09-26 | https://usegalaxy.cz | ||||||
| 2024-04-03 | 2024-06-24 | MIT | Phylogenetic tree generation (maximum likelihood and Bayesian methods) Visualisation Phylogenetic tree analysis Phylogenetic tree generation Multiple sequence alignment Mapping Phylogenetic tree generation (from molecular sequences) Phylogenetic tree reconstruction | name:Collection name:microGalaxy name:PathoGFAIR name:IWC | https://usegalaxy.eu | |||
| 2024-07-03 | 2024-07-03 | MIT | Phylogenetic tree generation (maximum likelihood and Bayesian methods) Visualisation Phylogenetic tree analysis Phylogenetic tree generation Multiple sequence alignment Mapping Phylogenetic tree generation (from molecular sequences) Phylogenetic tree reconstruction | name:Collection name:microGalaxy name:PathoGFAIR name:IWC | https://usegalaxy.org | |||
| 2024-07-03 | 2024-07-03 | MIT | Phylogenetic tree generation (maximum likelihood and Bayesian methods) Visualisation Phylogenetic tree analysis Phylogenetic tree generation Multiple sequence alignment Mapping Phylogenetic tree generation (from molecular sequences) Phylogenetic tree reconstruction | name:Collection name:microGalaxy name:PathoGFAIR name:IWC | https://usegalaxy.org.au | |||
| 2024-09-19 | 2024-09-19 | MIT | Phylogenetic tree generation (maximum likelihood and Bayesian methods) Visualisation Phylogenetic tree analysis Phylogenetic tree generation Multiple sequence alignment Mapping Phylogenetic tree generation (from molecular sequences) Phylogenetic tree reconstruction | name:Collection name:microGalaxy name:PathoGFAIR name:IWC | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | MIT | Phylogenetic tree generation (maximum likelihood and Bayesian methods) Visualisation Phylogenetic tree analysis Phylogenetic tree generation Multiple sequence alignment Mapping Phylogenetic tree generation (from molecular sequences) Phylogenetic tree reconstruction | name:Collection name:microGalaxy name:PathoGFAIR name:IWC | https://usegalaxy.org | |||
| 2024-09-19 | 2024-09-19 | MIT | Phylogenetic tree generation (maximum likelihood and Bayesian methods) Visualisation Phylogenetic tree analysis Phylogenetic tree generation Multiple sequence alignment Mapping Phylogenetic tree generation (from molecular sequences) Phylogenetic tree reconstruction | name:Collection name:microGalaxy name:PathoGFAIR name:IWC | https://usegalaxy.org.au | |||
| 2023-02-02 | 2023-05-30 | MIT | Taxonomic classification | microbiome nanopore | https://usegalaxy.eu | |||
| 2022-11-29 | 2024-04-04 | MIT | Phylogenetic tree generation (maximum likelihood and Bayesian methods) Visualisation Phylogenetic tree analysis Phylogenetic tree generation Multiple sequence alignment Mapping Phylogenetic tree generation (from molecular sequences) Phylogenetic tree reconstruction | microbiome nanopore IWC name:Collection name:microGalaxy | https://usegalaxy.eu | |||
| 2023-01-10 | 2023-05-30 | MIT | Base-calling Genome assembly De-novo assembly Variant calling Antimicrobial resistance prediction Cross-assembly Mapping assembly Sequence assembly Sequence assembly visualisation Multilocus sequence typing | microbiome nanopore | https://usegalaxy.eu | |||
| 2023-02-02 | 2023-05-30 | MIT | Statistical calculation Taxonomic classification Sequence composition calculation Validation Sequence contamination filtering Box-Whisker plot plotting Sequencing quality control Scatter plot plotting | microbiome nanopore | https://usegalaxy.eu | |||
| 2023-01-16 | 2023-05-30 | MIT | Variant calling Pairwise sequence alignment | microbiome nanopore | https://usegalaxy.eu | |||
| 2023-02-17 | 2023-05-30 | MIT | Visualisation Taxonomic classification Aggregation | microbiome nanopore | https://usegalaxy.eu | |||
| 2024-06-26 | 2024-07-15 | MIT | Phylogenetic tree generation (maximum likelihood and Bayesian methods) Visualisation Phylogenetic tree analysis Phylogenetic tree generation Multiple sequence alignment Mapping Phylogenetic tree generation (from molecular sequences) Phylogenetic tree reconstruction | WorkflowHub | ||||
| 2024-05-31 | 2024-07-03 | MIT | name:microGalaxy name:IWC name:PathoGFAIR name:Nanopore name:Collection | https://usegalaxy.eu | ||||
| 2024-07-03 | 2024-07-03 | MIT | name:microGalaxy name:IWC name:PathoGFAIR name:Nanopore name:Collection | https://usegalaxy.org | ||||
| 2024-07-03 | 2024-07-03 | MIT | name:microGalaxy name:IWC name:PathoGFAIR name:Nanopore name:Collection | https://usegalaxy.org.au | ||||
| 2020-05-29 | 2023-01-16 | MIT | Retrosynthesis | WorkflowHub | ||||
| 2020-05-29 | 2023-01-16 | MIT | Retrosynthesis Synthetic Biology metabolic engineering pathway design pathway prediction | WorkflowHub | ||||
| 2019-05-03 | 2019-05-03 | Multiple sequence alignment Mapping | https://usegalaxy.eu | |||||
| 2010-06-23 | 2010-06-24 | https://usegalaxy.org | ||||||
| 2024-08-02 | 2024-08-22 | Statistical calculation Formatting Sequence composition calculation Validation Sequence contamination filtering Visualisation Sequence alignment Sequencing quality control | https://usegalaxy.org.au | |||||
| 2023-12-11 | 2023-12-13 | Phasing k-mer counting Taxonomic classification Genome assembly Phylogenetic tree generation De-novo assembly Scaffolding Coding region prediction Phylogenetic tree visualisation Sequence contamination filtering Variant calling Genome annotation Validation Sequence analysis Phylogenetic tree analysis Gene prediction Sequencing quality control | WGS Illumina pathogen workflow | https://usegalaxy.org | ||||
| 2024-03-15 | 2024-03-22 | Differential binding analysis | https://usegalaxy.eu | |||||
| 2024-05-13 | 2024-05-17 | Peak detection Mass spectrum visualisation Chromatogram visualisation Validation Chromatographic alignment Filtering Label-free quantification | 2024 EBI_course LCMS MTBLS719 | https://usegalaxy.fr | ||||
| 2020-02-25 | 2020-02-25 | https://usegalaxy.eu | ||||||
| 2023-07-30 | 2023-07-30 | https://usegalaxy.eu | ||||||
| 2023-05-19 | 2023-05-19 | Read mapping | https://usegalaxy.eu | |||||
| 2022-06-25 | 2022-06-29 | https://usegalaxy.eu | ||||||
| 2022-06-24 | 2022-06-24 | https://usegalaxy.eu | ||||||
| 2021-04-19 | 2021-04-30 | Visualisation Prediction and recognition | https://usegalaxy.eu | |||||
| 2021-04-30 | 2021-05-10 | https://usegalaxy.eu | ||||||
| 2021-05-08 | 2021-05-10 | https://usegalaxy.eu | ||||||
| 2022-03-31 | 2022-03-31 | proteomics | https://usegalaxy.eu | |||||
| 2020-08-31 | 2020-08-31 | proteomics galaxy-training-network | https://usegalaxy.org.au | |||||
| 2020-08-31 | 2020-08-31 | proteomics galaxy-training-network | https://usegalaxy.org.au | |||||
| 2019-06-06 | 2019-06-30 | training gcc2019 | https://usegalaxy.eu | |||||
| 2024-09-05 | 2024-09-05 | Differential gene expression analysis Gene-set enrichment analysis | https://usegalaxy.eu | |||||
| 2015-07-30 | 2016-02-09 | aptamer SELEX | https://usegalaxy.org | |||||
| 2015-07-31 | 2024-06-14 | https://usegalaxy.org | ||||||
| 2015-07-31 | 2016-04-12 | aptamer SELEX | https://usegalaxy.org | |||||
| 2024-02-29 | 2024-04-15 | phage genecalling ORF novelgenes smallORFs | https://usegalaxy.eu | |||||
| 2023-04-03 | 2023-04-14 | Analysis Sequence assembly Read mapping Read alignment | https://usegalaxy.eu | |||||
| 2022-04-08 | 2022-04-13 | Differential gene expression analysis RNA-Seq analysis Transcriptome assembly RNA-Seq quantification Sequence alignment Read summarisation Sequence annotation | https://usegalaxy.eu | |||||
| 2021-03-19 | 2021-03-19 | ecology galaxy-training-network | https://usegalaxy.org.au | |||||
| 2022-04-26 | 2022-04-26 | Sequence read processing Phylogenetic analysis Taxonomic classification Phylogenetic tree generation Sequence analysis Visualisation Sequence clustering Phylogenetic tree analysis Multiple sequence alignment DNA barcoding Phylogenetic tree reconstruction Sequencing quality control | phylogeny fasta phylogenetic | https://usegalaxy.org | ||||
| 2020-12-17 | 2021-09-07 | Sequence read processing Phylogenetic analysis Taxonomic classification Phylogenetic tree generation Sequence analysis Visualisation Sequence clustering Phylogenetic tree analysis Multiple sequence alignment DNA barcoding Phylogenetic tree reconstruction Sequencing quality control | phylogeny fasta phylogenetic | https://usegalaxy.org | ||||
| 2021-02-17 | 2021-04-14 | Pairwise sequence alignment Phylogenetic tree generation (maximum likelihood and Bayesian methods) Phylogenetic tree analysis Phylogenetic tree generation Multiple sequence alignment Phylogenetic tree generation (from molecular sequences) Phylogenetic tree reconstruction | https://usegalaxy.org.au | |||||
| 2021-04-22 | 2021-04-23 | Phylogenetic tree generation (maximum likelihood and Bayesian methods) Phylogenetic tree generation (from molecular sequences) | https://usegalaxy.eu | |||||
| 2013-01-01 | 2015-01-26 | https://usegalaxy.org | ||||||
| 2012-12-09 | 2015-01-26 | https://usegalaxy.org | ||||||
| 2016-08-22 | 2016-08-26 | Statistical calculation Formatting Generation Genome indexing Sequence composition calculation Read mapping Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2023-10-27 | 2024-01-25 | Statistical calculation Formatting Sequence composition calculation Sequence alignment Sequencing quality control | name:dnaseq name:tutorial name:variantcalling | https://usegalaxy.eu | ||||
| 2020-12-09 | 2020-12-09 | https://usegalaxy.eu | ||||||
| 2024-07-04 | 2024-07-10 | MIT | Genome visualisation Operation Genome assembly Mapping Sequence annotation Homology-based gene prediction Scaffolding Sequence assembly validation Transcriptome assembly Gene prediction Ab-initio gene prediction | Genome Plant DNA QualityAssessment genome-annotation | https://usegalaxy.org | |||
| 2022-10-27 | 2022-10-27 | Statistical calculation Sequence trimming Sequence composition calculation Read pre-processing Primer removal Sequencing quality control | https://usegalaxy.org | |||||
| 2024-06-28 | 2024-06-28 | Visualisation Data handling | WorkflowHub | |||||
| 2022-04-15 | 2022-04-20 | https://usegalaxy.eu | ||||||
| 2021-07-22 | 2022-11-28 | https://usegalaxy.org | ||||||
| 2017-04-29 | 2019-02-15 | Statistical calculation Formatting Genome indexing Sequence composition calculation Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2023-09-08 | 2024-04-20 | MIT | Pairwise sequence alignment Genome assembly Mapping assembly | WorkflowHub | ||||
| 2015-07-26 | 2015-07-26 | Variant calling Statistical calculation Genome indexing Generation Read mapping Sequence alignment | https://usegalaxy.org | |||||
| 2017-02-11 | 2017-02-11 | Statistical calculation Formatting Data handling Sequence alignment analysis Genome indexing Sequence composition calculation Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2020-07-24 | 2023-01-16 | MIT | Biodiversity Community_metrics Ecology GLM Modeling Presence_absence Species abundance Statistics | WorkflowHub | ||||
| 2020-07-23 | 2020-07-24 | Community_metrics Presence_absence GLM | https://usegalaxy.eu | |||||
| 2024-06-24 | 2024-10-10 | Sequencing quality control Taxonomic classification Genome assembly De-novo assembly Cross-assembly Mapping assembly Filtering Multilocus sequence typing | https://usegalaxy.eu | |||||
| 2023-03-27 | 2023-04-03 | Phasing k-mer counting Data handling Sequence alignment analysis Genome assembly De-novo assembly Scaffolding Sequence trimming Transcriptome assembly Sequence assembly visualisation Sequence alignment Sequence assembly validation Genotyping | https://usegalaxy.eu | |||||
| 2023-02-13 | 2023-03-27 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Transcriptome assembly Sequence alignment Sequence assembly validation | https://usegalaxy.eu | |||||
| 2023-07-12 | 2023-07-12 | CC-BY-4.0 | https://usegalaxy.eu | |||||
| 2021-12-29 | 2022-09-09 | https://usegalaxy.org | ||||||
| 2019-10-28 | 2020-06-22 | Validation Statistical calculation RNA-Seq analysis Transcriptome assembly Sequence composition calculation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2024-08-02 | 2024-08-02 | MIT | Sequence alignment analysis Local alignment Genome indexing Read mapping Global alignment Validation Sequence contamination filtering Sequence analysis Generation Sequence alignment Sequencing quality control | pox virology | https://usegalaxy.eu | |||
| 2023-03-02 | 2023-03-02 | MIT | Sequence alignment analysis Local alignment Genome indexing Read mapping Global alignment Validation Sequence contamination filtering Sequence analysis Generation Sequence alignment Sequencing quality control | pox virology | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | MIT | Sequence alignment analysis Local alignment Genome indexing Read mapping Global alignment Validation Sequence contamination filtering Sequence analysis Generation Sequence alignment Sequencing quality control | pox virology | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | MIT | Sequence alignment analysis Local alignment Genome indexing Read mapping Global alignment Validation Sequence contamination filtering Sequence analysis Generation Sequence alignment Sequencing quality control | pox virology | https://usegalaxy.org.au | |||
| 2024-06-22 | 2024-06-22 | MIT | Sequence alignment analysis Local alignment Genome indexing Read mapping Global alignment Validation Sequence contamination filtering Sequence analysis Generation Sequence alignment Sequencing quality control | Virology pox | WorkflowHub | |||
| 2020-09-14 | 2020-09-28 | Statistical calculation Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.org | |||||
| 2020-09-14 | 2020-09-23 | Statistical calculation Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.org | |||||
| 2020-12-13 | 2020-12-13 | https://usegalaxy.eu | ||||||
| 2020-12-13 | 2020-12-13 | https://usegalaxy.eu | ||||||
| 2020-12-13 | 2020-12-13 | Filtering Visualisation Prediction and recognition Formatting | https://usegalaxy.eu | |||||
| 2020-12-13 | 2020-12-13 | Filtering Visualisation Prediction and recognition Formatting | https://usegalaxy.eu | |||||
| 2020-12-13 | 2020-12-13 | Filtering Visualisation Prediction and recognition Formatting | https://usegalaxy.eu | |||||
| 2023-07-10 | 2023-07-14 | CC-BY-4.0 | Sequence alignment analysis Phylogenetic tree generation Local alignment Read mapping Global alignment Phylogenetic tree visualisation Variant calling Sequence analysis Sequence alignment | https://usegalaxy.eu | ||||
| 2020-06-22 | 2020-06-30 | https://usegalaxy.eu | ||||||
| 2015-03-30 | 2016-04-13 | aptamer SELEX | https://usegalaxy.org | |||||
| 2015-03-30 | 2016-04-13 | aptamer SELEX | https://usegalaxy.org | |||||
| 2021-03-19 | 2021-03-19 | Validation Community profiling Sequence alignment Loading Sequencing quality control | transcriptomics single-cell galaxy-training-network | https://usegalaxy.org.au | ||||
| 2014-12-04 | 2014-12-04 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org | |||||
| 2013-10-28 | 2018-09-03 | https://usegalaxy.eu | ||||||
| 2024-02-21 | 2024-02-23 | MIT | https://usegalaxy.eu | |||||
| 2021-06-15 | 2021-11-09 | Pairwise sequence alignment Sequence file editing Data handling | LG-WF | https://usegalaxy.org.au | ||||
| 2022-06-06 | 2023-02-13 | CC-BY-4.0 | Genome assembly Scaffolding Genetic variation analysis Genome annotation Sequence analysis Transcriptome assembly Sequence clustering Multiple sequence alignment Sequence assembly validation | Annotation phylogenetics phylogenomics | WorkflowHub | |||
| 2013-05-15 | 2013-06-03 | Sequence composition calculation Statistical calculation Sequencing quality control | RNAseq illumina | https://usegalaxy.org | ||||
| 2017-09-26 | 2017-09-27 | https://usegalaxy.org | ||||||
| 2024-10-02 | 2024-10-04 | CC-BY-4.0 | Community profiling Sequence alignment Loading | single-cell transcriptomics | https://usegalaxy.org | |||
| 2022-03-19 | 2022-04-08 | https://usegalaxy.eu | ||||||
| 2022-04-05 | 2022-05-16 | Community profiling RNA-Seq quantification Gene expression analysis Sequence composition calculation Loading | https://usegalaxy.eu | |||||
| 2022-04-04 | 2022-06-10 | Validation Alignment Genome annotation Visualisation | https://usegalaxy.eu | |||||
| 2022-04-04 | 2022-05-16 | Community profiling Sequence alignment Loading | https://usegalaxy.eu | |||||
| 2022-04-04 | 2022-05-16 | Community profiling Read summarisation Data handling Sequence alignment analysis RNA-Seq quantification Sequence alignment Loading Sequencing quality control | https://usegalaxy.eu | |||||
| 2022-09-01 | 2022-10-11 | Validation Statistical calculation RNA-Seq quantification Gene expression analysis Sequence composition calculation Sequencing quality control | RNA-Seq transcription matrix counts | https://usegalaxy.org.au | ||||
| 2018-06-28 | 2024-03-08 | AGPL-3.0-or-later | Sequence file editing Data handling Nucleic acid sequence analysis | NEBNext | https://usegalaxy.org | |||
| 2022-01-21 | 2024-03-07 | AGPL-3.0-or-later | Sequence file editing Data handling Nucleic acid sequence analysis | NEBNext | https://usegalaxy.org | |||
| 2016-10-25 | 2016-12-26 | Sequence alignment analysis Local alignment Global alignment Sequence analysis Sequence alignment | https://usegalaxy.org | |||||
| 2022-11-21 | 2022-11-21 | Variant calling Statistical calculation Sequence composition calculation Read mapping Sequencing quality control | https://usegalaxy.org | |||||
| 2023-01-19 | 2023-01-19 | Validation Statistical calculation Sequence composition calculation Sequence alignment Sequencing quality control | https://usegalaxy.eu | |||||
| 2015-09-27 | 2015-09-30 | Variant calling Formatting Read mapping Statistical calculation | https://usegalaxy.org | |||||
| 2015-09-22 | 2015-09-30 | https://usegalaxy.org | ||||||
| 2023-09-07 | 2024-02-06 | Sequence contamination filtering Sequence assembly Read pre-processing Read mapping Sequence merging Sequencing quality control | https://usegalaxy.eu | |||||
| 2014-09-11 | 2014-09-22 | https://usegalaxy.eu | ||||||
| 2024-02-01 | 2024-02-01 | GPL-3.0-or-later | Validation Statistical calculation Visualisation Taxonomic classification Sequence composition calculation Aggregation Sequencing quality control | https://usegalaxy.org | ||||
| 2020-08-31 | 2020-08-31 | proteomics galaxy-training-network | https://usegalaxy.org.au | |||||
| 2021-09-26 | 2023-01-16 | Apache-2.0 | WorkflowHub | |||||
| 2019-12-19 | 2019-12-20 | cheminformatics | https://usegalaxy.eu | |||||
| 2020-04-01 | 2020-04-02 | cheminformatics | https://usegalaxy.eu | |||||
| 2020-04-28 | 2021-04-06 | cheminformatics moleculardynamics | https://usegalaxy.eu | |||||
| 2021-12-21 | 2024-07-01 | MIT | WorkflowHub | |||||
| 2022-10-28 | 2022-10-28 | https://usegalaxy.org | ||||||
| 2020-08-31 | 2020-08-31 | proteomics galaxy-training-network | https://usegalaxy.org.au | |||||
| 2020-06-02 | 2020-06-22 | proteomics proteore | https://usegalaxy.fr | |||||
| 2021-03-19 | 2021-03-19 | proteomics galaxy-training-network | https://usegalaxy.org.au | |||||
| 2021-03-19 | 2021-03-19 | proteomics galaxy-training-network | https://usegalaxy.org.au | |||||
| 2021-03-19 | 2021-03-19 | Statistical calculation Tag-based peptide identification Heat map generation Spectrum calculation Standardisation and normalisation Protein quantification Visualisation Imputation Differential protein expression profiling Clustering Principal component plotting | proteomics galaxy-training-network | https://usegalaxy.org.au | ||||
| 2021-03-19 | 2021-03-19 | Statistical calculation Heat map generation Standardisation and normalisation Protein quantification Visualisation Imputation Clustering Principal component plotting | proteomics galaxy-training-network | https://usegalaxy.org.au | ||||
| 2021-03-19 | 2021-03-19 | proteomics galaxy-training-network | https://usegalaxy.org.au | |||||
| 2021-03-19 | 2021-03-19 | proteomics galaxy-training-network | https://usegalaxy.org.au | |||||
| 2010-10-19 | 2011-03-24 | https://usegalaxy.org | ||||||
| 2023-05-15 | 2023-05-15 | https://usegalaxy.eu | ||||||
| 2021-01-12 | 2021-01-12 | Differential gene expression analysis Sequence trimming Read summarisation RNA-Seq quantification RNA-Seq analysis Read pre-processing Sequence alignment Primer removal | https://usegalaxy.eu | |||||
| 2023-11-09 | 2023-11-09 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Read binning Pairwise sequence alignment Transcriptome assembly Sequence assembly validation | VGP_curated | https://usegalaxy.eu | |||
| 2023-11-09 | 2023-11-09 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Read binning Pairwise sequence alignment Transcriptome assembly Sequence assembly validation | VGP_curated | https://usegalaxy.org | |||
| 2023-11-13 | 2023-11-13 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Read binning Pairwise sequence alignment Transcriptome assembly Sequence assembly validation | VGP_curated | https://usegalaxy.org.au | |||
| 2023-11-09 | 2023-11-09 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Read binning Pairwise sequence alignment Transcriptome assembly Sequence assembly validation | VGP_curated | https://usegalaxy.eu | |||
| 2023-11-09 | 2023-11-09 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Read binning Pairwise sequence alignment Transcriptome assembly Sequence assembly validation | VGP_curated | https://usegalaxy.org | |||
| 2023-11-13 | 2023-11-13 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Read binning Pairwise sequence alignment Transcriptome assembly Sequence assembly validation | VGP_curated | https://usegalaxy.org.au | |||
| 2022-10-17 | 2023-01-30 | GPL-3.0 | Sequence assembly | Pairwise sequence alignment Read binning Scaffolding Genome assembly | Assembly HiFi purge_dups | WorkflowHub | ||
| 2021-09-08 | 2022-03-25 | GPL-3.0-or-later | Pairwise sequence alignment Read binning Scaffolding Genome assembly | Assembly purge_dups HiFi | https://usegalaxy.org.au | |||
| 2023-11-09 | 2023-11-09 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Read binning Pairwise sequence alignment Transcriptome assembly Sequence assembly validation | VGP_curated | https://usegalaxy.eu | |||
| 2023-11-09 | 2023-11-09 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Read binning Pairwise sequence alignment Transcriptome assembly Sequence assembly validation | VGP_curated | https://usegalaxy.org | |||
| 2023-11-13 | 2023-11-13 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Read binning Pairwise sequence alignment Transcriptome assembly Sequence assembly validation | VGP_curated | https://usegalaxy.org.au | |||
| 2023-11-09 | 2023-11-09 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Read binning Pairwise sequence alignment Transcriptome assembly Sequence assembly validation | VGP_curated | https://usegalaxy.eu | |||
| 2023-11-09 | 2023-11-09 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Read binning Pairwise sequence alignment Transcriptome assembly Sequence assembly validation | VGP_curated | https://usegalaxy.org | |||
| 2023-11-13 | 2023-11-13 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Read binning Pairwise sequence alignment Transcriptome assembly Sequence assembly validation | VGP_curated | https://usegalaxy.org.au | |||
| 2023-11-16 | 2023-11-16 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Read binning Pairwise sequence alignment Transcriptome assembly Sequence assembly validation | VGP_curated | https://usegalaxy.eu | |||
| 2023-11-23 | 2023-11-23 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Read binning Pairwise sequence alignment Transcriptome assembly Sequence assembly validation | VGP_curated | https://usegalaxy.org | |||
| 2023-12-14 | 2023-12-14 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Read binning Pairwise sequence alignment Transcriptome assembly Sequence assembly validation | VGP_curated | https://usegalaxy.org.au | |||
| 2023-11-23 | 2023-11-23 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Read binning Pairwise sequence alignment Transcriptome assembly Sequence assembly validation | VGP_curated | https://usegalaxy.eu | |||
| 2023-11-23 | 2023-11-23 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Read binning Pairwise sequence alignment Transcriptome assembly Sequence assembly validation | VGP_curated | https://usegalaxy.org | |||
| 2023-12-14 | 2023-12-14 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Read binning Pairwise sequence alignment Transcriptome assembly Sequence assembly validation | VGP_curated | https://usegalaxy.org.au | |||
| 2023-11-30 | 2023-11-30 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Read binning Pairwise sequence alignment Transcriptome assembly Sequence assembly validation | VGP_curated | https://usegalaxy.eu | |||
| 2023-11-30 | 2023-11-30 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Read binning Pairwise sequence alignment Transcriptome assembly Sequence assembly validation | VGP_curated | https://usegalaxy.org | |||
| 2023-12-14 | 2023-12-14 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Read binning Pairwise sequence alignment Transcriptome assembly Sequence assembly validation | VGP_curated | https://usegalaxy.org.au | |||
| 2024-02-22 | 2024-02-22 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Read binning Pairwise sequence alignment Transcriptome assembly Sequence assembly validation | VGP_curated | https://usegalaxy.eu | |||
| 2024-02-22 | 2024-02-22 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Read binning Pairwise sequence alignment Transcriptome assembly Sequence assembly validation | VGP_curated | https://usegalaxy.org | |||
| 2024-02-22 | 2024-02-22 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Read binning Pairwise sequence alignment Transcriptome assembly Sequence assembly validation | VGP_curated | https://usegalaxy.org.au | |||
| 2024-03-07 | 2024-03-07 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Read binning Pairwise sequence alignment Transcriptome assembly Sequence assembly validation | VGP_curated | https://usegalaxy.eu | |||
| 2024-03-07 | 2024-03-07 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Read binning Pairwise sequence alignment Transcriptome assembly Sequence assembly validation | VGP_curated | https://usegalaxy.org.au | |||
| 2024-03-28 | 2024-03-28 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Read binning Pairwise sequence alignment Transcriptome assembly Sequence assembly validation | VGP_curated | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Read binning Pairwise sequence alignment Transcriptome assembly Sequence assembly validation | VGP_curated | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Read binning Pairwise sequence alignment Transcriptome assembly Sequence assembly validation | VGP_curated | https://usegalaxy.org | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Read binning Pairwise sequence alignment Transcriptome assembly Sequence assembly validation | VGP_curated | https://usegalaxy.org.au | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Read binning Pairwise sequence alignment Transcriptome assembly Sequence assembly validation | VGP_curated | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Read binning Pairwise sequence alignment Transcriptome assembly Sequence assembly validation | VGP_curated | https://usegalaxy.org | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Read binning Pairwise sequence alignment Transcriptome assembly Sequence assembly validation | VGP_curated | https://usegalaxy.org.au | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Read binning Pairwise sequence alignment Transcriptome assembly Sequence assembly validation | VGP_curated | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Read binning Pairwise sequence alignment Transcriptome assembly Sequence assembly validation | VGP_curated | https://usegalaxy.org | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Read binning Pairwise sequence alignment Transcriptome assembly Sequence assembly validation | VGP_curated | https://usegalaxy.org.au | |||
| 2024-10-07 | 2024-10-07 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Read binning Pairwise sequence alignment Transcriptome assembly Sequence assembly validation | WorkflowHub | ||||
| 2024-10-07 | 2024-10-13 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Read binning Pairwise sequence alignment Transcriptome assembly Sequence assembly validation | WorkflowHub | ||||
| 2022-11-09 | 2022-11-10 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Read binning Pairwise sequence alignment Transcriptome assembly Sequence assembly validation | vgp assembly hifi purge_dups | https://usegalaxy.org.au | |||
| 2022-12-14 | 2023-01-26 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Read binning Pairwise sequence alignment Transcriptome assembly Sequence assembly validation | VGP_curated | https://usegalaxy.eu | |||
| 2022-11-09 | 2022-11-10 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Read binning Pairwise sequence alignment | vgs assembly hifi purge_dups | https://usegalaxy.org.au | |||
| 2022-11-09 | 2022-11-10 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Read binning Pairwise sequence alignment Transcriptome assembly Sequence assembly validation | vgp assembly hifi purge_dups | https://usegalaxy.org.au | |||
| 2024-02-15 | 2024-02-15 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Read binning Pairwise sequence alignment Transcriptome assembly Sequence assembly validation | VGP_curated | https://usegalaxy.eu | |||
| 2024-02-15 | 2024-02-15 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Read binning Pairwise sequence alignment Transcriptome assembly Sequence assembly validation | VGP_curated | https://usegalaxy.org | |||
| 2024-02-15 | 2024-02-15 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Read binning Pairwise sequence alignment Transcriptome assembly Sequence assembly validation | VGP_curated | https://usegalaxy.org.au | |||
| 2024-03-07 | 2024-03-07 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Read binning Pairwise sequence alignment Transcriptome assembly Sequence assembly validation | VGP_curated | https://usegalaxy.eu | |||
| 2024-03-07 | 2024-03-07 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Read binning Pairwise sequence alignment Transcriptome assembly Sequence assembly validation | VGP_curated | https://usegalaxy.org.au | |||
| 2024-03-28 | 2024-03-28 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Read binning Pairwise sequence alignment Transcriptome assembly Sequence assembly validation | VGP_curated | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Read binning Pairwise sequence alignment Transcriptome assembly Sequence assembly validation | VGP_curated | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Read binning Pairwise sequence alignment Transcriptome assembly Sequence assembly validation | VGP_curated | https://usegalaxy.org | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Read binning Pairwise sequence alignment Transcriptome assembly Sequence assembly validation | VGP_curated | https://usegalaxy.org.au | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Read binning Pairwise sequence alignment Transcriptome assembly Sequence assembly validation | VGP_curated | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Read binning Pairwise sequence alignment Transcriptome assembly Sequence assembly validation | VGP_curated | https://usegalaxy.org | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Read binning Pairwise sequence alignment Transcriptome assembly Sequence assembly validation | VGP_curated | https://usegalaxy.org.au | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Read binning Pairwise sequence alignment Transcriptome assembly Sequence assembly validation | VGP_curated | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Read binning Pairwise sequence alignment Transcriptome assembly Sequence assembly validation | VGP_curated | https://usegalaxy.org | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Read binning Pairwise sequence alignment Transcriptome assembly Sequence assembly validation | VGP_curated | https://usegalaxy.org.au | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Read binning Pairwise sequence alignment Transcriptome assembly Sequence assembly validation | VGP_curated | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Read binning Pairwise sequence alignment Transcriptome assembly Sequence assembly validation | VGP_curated | https://usegalaxy.org | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Phasing k-mer counting Data handling Genome assembly De-novo assembly Scaffolding Read binning Pairwise sequence alignment Transcriptome assembly Sequence assembly validation | VGP_curated | https://usegalaxy.org.au | |||
| 2015-10-12 | 2015-10-12 | Variant calling Formatting Statistical calculation | https://usegalaxy.eu | |||||
| 2014-11-13 | 2017-09-22 | Variant calling Formatting Read mapping Statistical calculation | Exome | https://usegalaxy.eu | ||||
| 2020-07-15 | 2020-07-16 | Filtering Formatting | https://usegalaxy.eu | |||||
| 2020-12-05 | 2020-12-13 | Filtering Visualisation Prediction and recognition Formatting | https://usegalaxy.eu | |||||
| 2020-10-06 | 2020-10-09 | Visualisation Prediction and recognition | https://usegalaxy.eu | |||||
| 2020-12-05 | 2020-12-13 | Filtering Visualisation Prediction and recognition Formatting | https://usegalaxy.eu | |||||
| 2020-12-05 | 2020-12-13 | Filtering Visualisation Prediction and recognition Formatting | https://usegalaxy.eu | |||||
| 2020-08-19 | 2020-12-05 | Filtering Visualisation Prediction and recognition Formatting | https://usegalaxy.eu | |||||
| 2022-10-18 | 2022-10-18 | Pairwise sequence alignment Phylogenetic tree analysis Phylogenetic tree reconstruction Phylogenetic tree generation | viral bacterial quickies variation phylogeny | https://usegalaxy.org | ||||
| 2022-06-08 | 2022-06-14 | Pairwise sequence alignment Phylogenetic tree analysis Phylogenetic tree reconstruction Phylogenetic tree generation | viral bacterial quickies variation phylogeny | https://usegalaxy.org | ||||
| 2012-03-17 | 2012-03-24 | https://usegalaxy.org | ||||||
| 2012-03-25 | 2012-03-26 | https://usegalaxy.org | ||||||
| 2023-05-11 | 2024-05-13 | MIT | Statistical calculation Formatting RNA-Seq quantification Data handling Sequence alignment Sequence composition calculation Primer removal Validation Sequence trimming Visualisation Read pre-processing Read summarisation Sequencing quality control | transcriptomics | https://usegalaxy.eu | |||
| 2023-05-11 | 2024-05-13 | MIT | Statistical calculation Formatting Data handling RNA-Seq quantification Sequence composition calculation Primer removal Validation Sequence trimming Visualisation Read summarisation Read pre-processing Sequence alignment Sequencing quality control | transcriptomics | https://usegalaxy.eu | |||
| 2021-03-19 | 2021-03-19 | Statistical calculation Data handling RNA-Seq quantification Sequence composition calculation Primer removal Validation Sequence trimming Read summarisation Read pre-processing Sequence alignment Sequencing quality control | transcriptomics galaxy-training-network | https://usegalaxy.org.au | ||||
| 2023-07-31 | 2023-08-04 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org | |||||
| 2023-04-18 | 2023-04-18 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org | |||||
| 2022-03-15 | 2022-05-11 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2024-05-08 | 2024-05-09 | GPL-3.0 | Validation Statistical calculation Sequence composition calculation Sequencing quality control | TSI-annotation | WorkflowHub | |||
| 2022-05-31 | 2023-01-30 | Apache-2.0 | Population genomics | Validation Sequence contamination filtering Statistical calculation Sequence trimming Sequence composition calculation Read pre-processing Primer removal Sequencing quality control | WorkflowHub | |||
| 2022-05-17 | 2022-05-18 | Validation Sequence contamination filtering Statistical calculation Sequence trimming Sequence composition calculation Read pre-processing Primer removal Sequencing quality control | https://usegalaxy.org.au | |||||
| 2021-03-19 | 2021-03-19 | Validation Formatting Data handling Sequencing quality control | transcriptomics galaxy-training-network | https://usegalaxy.org.au | ||||
| 2024-03-17 | 2024-03-18 | Validation Formatting Data handling Sequencing quality control | transcriptomics | https://usegalaxy.org | ||||
| 2023-08-31 | 2023-10-02 | Validation Formatting Data handling Sequencing quality control | transcriptomics | https://usegalaxy.org | ||||
| 2023-11-13 | 2023-11-13 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org | |||||
| 2024-01-18 | 2024-01-18 | Statistical calculation Data handling Sequence alignment analysis Sequence composition calculation RNA-Seq analysis Transcriptome assembly Sequence trimming Sequence alignment Sequencing quality control | https://usegalaxy.fr | |||||
| 2018-01-17 | 2018-01-17 | Phylogenetic analysis Taxonomic classification Demultiplexing Visualisation Sequencing quality control | ASaiM | https://usegalaxy.eu | ||||
| 2024-06-12 | 2024-06-18 | MIT | name:amplicon name:16S name:tutorial | https://usegalaxy.eu | ||||
| 2024-09-19 | 2024-09-19 | MIT | https://usegalaxy.eu | |||||
| 2024-09-19 | 2024-09-19 | MIT | https://usegalaxy.org | |||||
| 2024-09-19 | 2024-09-19 | MIT | https://usegalaxy.org.au | |||||
| 2024-09-19 | 2024-09-19 | MIT | https://usegalaxy.eu | |||||
| 2024-09-19 | 2024-09-19 | MIT | https://usegalaxy.org | |||||
| 2024-09-19 | 2024-09-19 | MIT | https://usegalaxy.org.au | |||||
| 2024-09-19 | 2024-09-19 | MIT | https://usegalaxy.eu | |||||
| 2024-09-19 | 2024-09-19 | MIT | https://usegalaxy.org | |||||
| 2024-09-19 | 2024-09-19 | MIT | https://usegalaxy.org.au | |||||
| 2024-09-19 | 2024-09-19 | MIT | https://usegalaxy.eu | |||||
| 2024-09-19 | 2024-09-19 | MIT | https://usegalaxy.org | |||||
| 2024-09-19 | 2024-09-19 | MIT | https://usegalaxy.org.au | |||||
| 2024-06-12 | 2024-06-18 | MIT | name:amplicon name:16S name:tutorial | https://usegalaxy.eu | ||||
| 2024-09-19 | 2024-09-19 | MIT | https://usegalaxy.eu | |||||
| 2024-09-19 | 2024-09-19 | MIT | https://usegalaxy.org | |||||
| 2024-09-19 | 2024-09-19 | MIT | https://usegalaxy.org.au | |||||
| 2024-09-19 | 2024-09-19 | MIT | https://usegalaxy.eu | |||||
| 2024-09-19 | 2024-09-19 | MIT | https://usegalaxy.org | |||||
| 2024-09-19 | 2024-09-19 | MIT | https://usegalaxy.org.au | |||||
| 2024-06-12 | 2024-06-18 | MIT | https://usegalaxy.eu | |||||
| 2024-06-12 | 2024-06-18 | MIT | https://usegalaxy.eu | |||||
| 2024-06-12 | 2024-06-18 | MIT | https://usegalaxy.eu | |||||
| 2024-09-19 | 2024-09-19 | MIT | https://usegalaxy.eu | |||||
| 2024-09-19 | 2024-09-19 | MIT | https://usegalaxy.org | |||||
| 2024-09-19 | 2024-09-19 | MIT | https://usegalaxy.org.au | |||||
| 2024-05-30 | 2024-07-13 | MIT | WorkflowHub | |||||
| 2024-05-30 | 2024-07-13 | MIT | WorkflowHub | |||||
| 2024-09-19 | 2024-09-19 | MIT | https://usegalaxy.eu | |||||
| 2024-09-19 | 2024-09-19 | MIT | https://usegalaxy.org | |||||
| 2024-09-19 | 2024-09-19 | MIT | https://usegalaxy.org.au | |||||
| 2024-08-07 | 2024-09-15 | MIT | WorkflowHub | |||||
| 2024-06-12 | 2024-10-04 | Amplicon QIIME2 BGGM Microbiome PairedReads | https://usegalaxy.org.au | |||||
| 2024-09-19 | 2024-09-19 | GPL-3.0-or-later | Parsing Statistical calculation Data handling Taxonomic classification Expression analysis Sequence contamination filtering Cross-assembly Sequencing quality control | Genomics fastq bacterial-genomics taxonomy-assignment paired-end quality ABRomics trimming | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | GPL-3.0-or-later | Parsing Statistical calculation Data handling Taxonomic classification Expression analysis Sequence contamination filtering Cross-assembly Sequencing quality control | Genomics fastq bacterial-genomics taxonomy-assignment paired-end quality ABRomics trimming | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | GPL-3.0-or-later | Parsing Statistical calculation Data handling Taxonomic classification Expression analysis Sequence contamination filtering Cross-assembly Sequencing quality control | Genomics fastq bacterial-genomics taxonomy-assignment paired-end quality ABRomics trimming | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | GPL-3.0-or-later | Parsing Statistical calculation Data handling Taxonomic classification Expression analysis Sequence contamination filtering Cross-assembly Sequencing quality control | Genomics fastq bacterial-genomics taxonomy-assignment paired-end quality ABRomics trimming | https://usegalaxy.eu | |||
| 2024-10-17 | 2024-10-17 | GPL-3.0-or-later | Parsing Statistical calculation Data handling Taxonomic classification Expression analysis Sequence contamination filtering Cross-assembly Sequencing quality control | Genomics fastq bacterial-genomics taxonomy-assignment paired-end quality ABRomics trimming | https://usegalaxy.eu | |||
| 2024-10-03 | 2024-10-03 | GPL-3.0-or-later | Parsing Statistical calculation Data handling Taxonomic classification Expression analysis Sequence contamination filtering Cross-assembly Sequencing quality control | Genomics fastq bacterial-genomics taxonomy-assignment paired-end quality ABRomics trimming | https://usegalaxy.org | |||
| 2024-10-17 | 2024-10-17 | GPL-3.0-or-later | Parsing Statistical calculation Data handling Taxonomic classification Expression analysis Sequence contamination filtering Cross-assembly Sequencing quality control | Genomics fastq bacterial-genomics taxonomy-assignment paired-end quality ABRomics trimming | https://usegalaxy.eu | |||
| 2024-10-17 | 2024-10-17 | GPL-3.0-or-later | Parsing Statistical calculation Data handling Taxonomic classification Expression analysis Sequence contamination filtering Cross-assembly Sequencing quality control | Genomics fastq bacterial-genomics taxonomy-assignment paired-end quality ABRomics trimming | https://usegalaxy.org | |||
| 2023-11-12 | 2023-11-12 | Statistical calculation Sequence trimming Sequence composition calculation Read pre-processing Primer removal Sequencing quality control | https://usegalaxy.org | |||||
| 2013-08-08 | 2013-08-09 | deepTools reads QC bam | https://usegalaxy.eu | |||||
| 2013-08-08 | 2013-08-09 | fingerprint correlation bam reads | https://usegalaxy.eu | |||||
| 2021-02-17 | 2021-04-22 | Statistical calculation Data handling Genome assembly Sequence composition calculation Sequencing quality control | Workflow test | https://usegalaxy.org | ||||
| 2024-04-10 | 2024-04-10 | Validation Statistical calculation Sequence trimming Sequence composition calculation Read pre-processing Sequence alignment Primer removal Sequencing quality control | https://usegalaxy.org.au | |||||
| 2022-05-20 | 2022-05-23 | Statistical calculation Sequence trimming Sequence composition calculation Read pre-processing Primer removal Sequencing quality control | https://usegalaxy.org | |||||
| 2022-06-16 | 2022-06-16 | CC-BY-4.0 | https://usegalaxy.eu | |||||
| 2022-06-16 | 2022-06-16 | CC-BY-4.0 | https://usegalaxy.org | |||||
| 2023-08-22 | 2023-08-22 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org | |||||
| 2012-10-31 | 2015-01-26 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org | |||||
| 2024-10-12 | 2024-10-12 | GPL-3.0-or-later | Parsing Statistical calculation Data handling Taxonomic classification Expression analysis Sequence contamination filtering Cross-assembly Sequencing quality control | ABRomics FASTQ Genomics bacterial-genomics paired-end quality taxonomy-assignment trimming | WorkflowHub | |||
| 2024-03-09 | 2024-03-26 | Nucleic acid sequence analysis Statistical calculation Sequence trimming Sequence composition calculation Read pre-processing Sequence alignment Primer removal Sequencing quality control | https://usegalaxy.eu | |||||
| 2024-06-13 | 2024-06-26 | https://usegalaxy.org | ||||||
| 2022-10-23 | 2022-10-23 | Mapping | https://usegalaxy.org | |||||
| 2016-09-22 | 2016-09-22 | ２１３１２ ｆｄｓａｄ ａｓｄａ | https://usegalaxy.org | |||||
| 2021-01-12 | 2021-02-14 | Genome indexing Generation Read mapping Sequence alignment | https://usegalaxy.org.au | |||||
| 2019-03-16 | 2019-04-17 | training raceid single-cell | https://usegalaxy.eu | |||||
| 2020-04-15 | 2020-04-22 | transcriptomics galaxy-training-network | https://usegalaxy.org.au | |||||
| 2021-08-03 | 2021-11-09 | Pairwise sequence alignment Genome assembly Mapping assembly | LG-WF | https://usegalaxy.org.au | ||||
| 2021-11-08 | 2023-01-30 | Apache-2.0 | Sequence assembly | Pairwise sequence alignment Genome assembly Mapping assembly | Large-genome-assembly | WorkflowHub | ||
| 2021-11-08 | 2023-01-30 | Apache-2.0 | Sequence assembly | Pairwise sequence alignment Genome assembly Mapping assembly | Large-genome-assembly | WorkflowHub | ||
| 2021-07-27 | 2021-11-09 | Pairwise sequence alignment Genome assembly Mapping assembly | LG-WF | https://usegalaxy.org.au | ||||
| 2020-05-19 | 2020-05-19 | https://usegalaxy.eu | ||||||
| 2019-05-14 | 2020-05-19 | https://usegalaxy.eu | ||||||
| 2019-05-14 | 2020-05-19 | https://usegalaxy.eu | ||||||
| 2020-05-19 | 2020-05-19 | https://usegalaxy.eu | ||||||
| 2022-01-26 | 2022-01-26 | Statistical calculation | https://usegalaxy.eu | |||||
| 2023-09-19 | 2023-09-19 | https://usegalaxy.eu | ||||||
| 2018-04-04 | 2018-12-04 | https://usegalaxy.org | ||||||
| 2018-08-03 | 2019-05-30 | Genome indexing Generation Read mapping Sequence alignment | https://usegalaxy.org | |||||
| 2016-11-10 | 2016-11-10 | Variant calling Statistical calculation Formatting Sequence composition calculation Mapping Sequencing quality control | https://usegalaxy.org | |||||
| 2024-04-10 | 2024-04-10 | Validation Statistical calculation Sequence trimming Sequence composition calculation Read pre-processing Sequence alignment Primer removal Sequencing quality control | https://usegalaxy.org.au | |||||
| 2018-07-24 | 2018-07-24 | Genome annotation Genome visualisation Genome assembly Gene prediction Coding region prediction | https://usegalaxy.org.au | |||||
| 2019-03-20 | 2022-09-23 | Statistical calculation Sequence composition calculation Read mapping Enrichment analysis Primer removal Gene regulatory network analysis Sequence trimming Peak calling Read pre-processing Sequencing quality control | https://usegalaxy.eu | |||||
| 2022-11-08 | 2022-11-09 | Validation Sequence contamination filtering Genome assembly Sequencing quality control | https://usegalaxy.eu | |||||
| 2014-08-27 | 2015-03-23 | https://usegalaxy.org | ||||||
| 2015-02-21 | 2015-07-30 | https://usegalaxy.org | ||||||
| 2015-03-23 | 2015-03-23 | https://usegalaxy.org | ||||||
| 2014-09-17 | 2015-03-23 | https://usegalaxy.org | ||||||
| 2023-10-27 | 2023-12-13 | Variant calling Statistical calculation Read mapping | name:microGalaxy HPylori | https://usegalaxy.eu | ||||
| 2019-01-17 | 2019-01-17 | Statistical calculation Data handling Gene functional annotation RNA-Seq quantification Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming Read summarisation RNA-Seq analysis Read pre-processing Sequence alignment Sequencing quality control | RNA RNA-seq deseq2 name:STAR | https://usegalaxy.eu | ||||
| 2019-05-25 | 2019-05-25 | Annotation | id2name | https://usegalaxy.eu | ||||
| 2024-02-14 | 2024-02-15 | CC-BY-4.0 | Genome visualisation | genome-annotation | WorkflowHub | |||
| 2019-07-04 | 2019-09-23 | Visualisation | https://usegalaxy.eu | |||||
| 2021-01-02 | 2022-03-07 | Image analysis | https://usegalaxy.eu | |||||
| 2020-01-24 | 2020-01-24 | ml | https://usegalaxy.eu | |||||
| 2020-04-09 | 2020-04-09 | statistics regression ml galaxy-training-network | https://usegalaxy.org.au | |||||
| 2020-04-09 | 2020-04-09 | ml statistics galaxy-training-network | https://usegalaxy.org.au | |||||
| 2020-05-23 | 2020-05-23 | statistics regression ml | https://usegalaxy.eu | |||||
| 2021-03-18 | 2021-03-18 | GPL-3.0-or-later | collections random | https://usegalaxy.eu | ||||
| 2023-11-09 | 2023-11-09 | CC-BY-4.0 | Biodiversity Ecology Environmental science | WorkflowHub | ||||
| 2023-11-09 | 2023-11-09 | https://usegalaxy.eu | ||||||
| 2014-09-10 | 2014-09-22 | https://usegalaxy.eu | ||||||
| 2020-11-19 | 2020-11-19 | https://usegalaxy.eu | ||||||
| 2024-03-07 | 2024-03-11 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.eu | |||||
| 2024-06-20 | 2024-06-20 | GPL-3.0 | Genome annotation Repeat sequence detection | TSI-annotation | WorkflowHub | |||
| 2023-09-28 | 2023-09-28 | MIT | Genome annotation Repeat sequence detection | https://usegalaxy.eu | ||||
| 2023-09-28 | 2023-09-28 | MIT | Genome annotation Repeat sequence detection | https://usegalaxy.org | ||||
| 2023-09-28 | 2023-09-28 | MIT | Genome annotation Repeat sequence detection | https://usegalaxy.org.au | ||||
| 2024-09-27 | 2024-10-05 | MIT | Mapping Genome annotation | https://usegalaxy.org | ||||
| 2023-09-22 | 2023-10-24 | MIT | Genome annotation Repeat sequence detection | WorkflowHub | ||||
| 2023-05-22 | 2023-05-23 | Sequence contamination filtering Read mapping Sequencing quality control | Metagenomics Resistome | https://usegalaxy.eu | ||||
| 2011-02-03 | 2011-02-24 | https://usegalaxy.org | ||||||
| 2021-06-11 | 2021-06-11 | climate | https://usegalaxy.eu | |||||
| 2020-05-29 | 2023-01-16 | MIT | Retrosynthesis Synthetic Biology metabolic engineering pathway design pathway prediction | WorkflowHub | ||||
| 2015-01-14 | 2015-01-15 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org | |||||
| 2019-01-26 | 2019-02-06 | https://usegalaxy.org | ||||||
| 2019-01-23 | 2019-01-23 | Nucleic acid feature detection | RNA Family Model | https://usegalaxy.eu | ||||
| 2021-01-24 | 2021-01-24 | Validation Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2021-01-24 | 2021-01-24 | RNA-Seq analysis Annotation | https://usegalaxy.eu | |||||
| 2021-03-19 | 2021-03-19 | RNA-Seq analysis Annotation | transcriptomics galaxy-training-network | https://usegalaxy.org.au | ||||
| 2021-03-19 | 2021-03-19 | Gene set testing Gene-set enrichment analysis Gene functional annotation | transcriptomics galaxy-training-network | https://usegalaxy.org.au | ||||
| 2021-03-19 | 2021-03-19 | Statistical calculation Formatting Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Sequence trimming Read pre-processing Read summarisation Sequencing quality control | transcriptomics galaxy-training-network | https://usegalaxy.org.au | ||||
| 2021-09-20 | 2021-09-20 | Statistical calculation RNA-Seq analysis Transcriptome assembly Sequence composition calculation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2024-03-23 | 2024-07-22 | Sequence database search Statistical calculation Sequence alignment analysis De-novo assembly Read mapping Coding region prediction Genome annotation Generation Sequencing quality control Data handling Taxonomic classification Genome assembly Genome indexing Sequence composition calculation Database search Sequence merging Transcriptome assembly Data retrieval Gene prediction Sequence alignment | https://usegalaxy.org | |||||
| 2024-08-07 | 2024-09-30 | Statistical calculation Data handling Taxonomic classification Genome assembly Sequence composition calculation Read mapping Aggregation Read binning Sequence merging Sequence contamination filtering Sequence trimming Visualisation Chimera detection RNA-Seq analysis DNA mapping Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2020-11-03 | 2023-02-13 | GPL-3.0 | Statistical calculation Sequence trimming Sequence composition calculation Read pre-processing Primer removal Sequencing quality control | Transcriptomics rna | WorkflowHub | |||
| 2020-03-21 | 2020-11-03 | Statistical calculation Sequence trimming Sequence composition calculation Read pre-processing Primer removal Sequencing quality control | RNA transcriptomics | https://usegalaxy.eu | ||||
| 2020-11-03 | 2023-02-13 | GPL-3.0 | Statistical calculation Sequence trimming Sequence composition calculation Read pre-processing Primer removal Sequencing quality control | Transcriptomics rna | WorkflowHub | |||
| 2020-11-02 | 2020-11-03 | Statistical calculation Sequence trimming Sequence composition calculation Read pre-processing Primer removal Sequencing quality control | RNA transcriptomics | https://usegalaxy.eu | ||||
| 2020-08-19 | 2020-12-04 | Statistical calculation Sequence trimming Sequence composition calculation Read pre-processing Primer removal Sequencing quality control | RNA transcriptomics | https://usegalaxy.eu | ||||
| 2019-06-18 | 2019-07-30 | Read summarisation Sequence alignment RNA-Seq quantification | https://usegalaxy.org | |||||
| 2017-09-04 | 2017-09-04 | RNA-Seq quantification Gene expression analysis Sequence composition calculation Enrichment analysis Primer removal Differential gene expression analysis Sequence trimming Exonic splicing enhancer prediction Read summarisation RNA-Seq analysis Read pre-processing Sequence alignment | https://usegalaxy.org | |||||
| 2021-09-02 | 2021-09-02 | Read mapping | https://usegalaxy.org | |||||
| 2018-07-12 | 2018-08-16 | Statistical calculation Formatting Sequence trimming Sequence composition calculation Read pre-processing Read mapping Primer removal Sequencing quality control | https://usegalaxy.org | |||||
| 2023-12-09 | 2023-12-09 | Statistical calculation RNA-Seq quantification Data handling Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2023-08-29 | 2023-08-29 | Statistical calculation Sequence composition calculation Sequence alignment Nucleic acid sequence analysis Sequencing quality control | https://usegalaxy.org | |||||
| 2018-02-06 | 2018-02-06 | Statistical calculation Data handling RNA-Seq quantification Sequence composition calculation Primer removal Validation Sequence trimming Read summarisation Read pre-processing Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2024-01-25 | 2024-01-25 | Statistical calculation Formatting Data handling RNA-Seq quantification Sequence composition calculation Primer removal Validation Sequence trimming Visualisation Read summarisation Read pre-processing Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2021-02-17 | 2023-10-24 | Differential gene expression analysis Statistical calculation RNA-Seq analysis Sequence composition calculation Read mapping Nucleic acid sequence analysis Sequencing quality control | https://usegalaxy.org | |||||
| 2017-05-23 | 2017-06-22 | Differential gene expression analysis RNA-Seq analysis Transcriptome assembly RNA-Seq quantification Sequence alignment Read summarisation Sequence annotation | https://usegalaxy.org | |||||
| 2016-01-23 | 2016-01-23 | Formatting | https://usegalaxy.org | |||||
| 2013-05-15 | 2013-07-17 | Formatting | RNAseq Illumina Tophat Cuffdiff | https://usegalaxy.org | ||||
| 2023-03-22 | 2023-03-27 | Differential gene expression analysis RNA-Seq analysis Read mapping | https://usegalaxy.org | |||||
| 2017-08-07 | 2017-08-11 | Differential gene expression analysis RNA-Seq analysis Read mapping | Easy | https://usegalaxy.org | ||||
| 2022-11-29 | 2024-07-24 | Statistical calculation Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Sequence trimming Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org | |||||
| 2023-01-30 | 2023-01-30 | Validation Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.org | |||||
| 2021-01-15 | 2021-01-15 | Gene set testing Gene-set enrichment analysis Gene functional annotation | https://usegalaxy.eu | |||||
| 2018-08-16 | 2018-08-16 | Statistical calculation Sequence trimming Sequence composition calculation Read pre-processing Read mapping Primer removal Sequencing quality control | https://usegalaxy.org | |||||
| 2014-11-24 | 2014-11-25 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org | |||||
| 2023-05-14 | 2023-05-15 | Statistical calculation Data handling RNA-Seq quantification Gene expression analysis Sequence composition calculation Primer removal Sequence annotation RNA-Seq analysis Sequence trimming Read pre-processing Sequencing quality control | https://usegalaxy.org | |||||
| 2020-05-07 | 2022-01-26 | Validation Statistical calculation Sequence composition calculation Read mapping Sequencing quality control | Rna Rnaseq Bioinformatics | https://usegalaxy.org | ||||
| 2015-10-07 | 2015-10-07 | Read mapping Data handling | https://usegalaxy.eu | |||||
| 2021-01-19 | 2021-01-28 | Validation Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2021-01-28 | 2021-01-28 | RNA-Seq analysis Annotation | https://usegalaxy.eu | |||||
| 2016-04-15 | 2016-04-21 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org | |||||
| 2020-05-01 | 2020-05-05 | Sequence composition calculation Statistical calculation Sequence alignment Sequencing quality control | https://usegalaxy.eu | |||||
| 2012-07-25 | 2012-07-31 | https://usegalaxy.org | ||||||
| 2012-06-22 | 2012-06-28 | https://usegalaxy.org | ||||||
| 2012-06-22 | 2012-06-22 | https://usegalaxy.org | ||||||
| 2023-05-01 | 2023-05-01 | Statistical calculation Data handling RNA-Seq quantification Gene expression analysis Sequence composition calculation Primer removal Sequence annotation Sequence trimming RNA-Seq analysis Read pre-processing Sequencing quality control | https://usegalaxy.org | |||||
| 2023-05-03 | 2023-05-03 | Statistical calculation Data handling RNA-Seq quantification Gene expression analysis Sequence composition calculation Primer removal Sequence annotation Sequence trimming RNA-Seq analysis Read pre-processing Sequencing quality control | https://usegalaxy.org | |||||
| 2023-11-14 | 2023-11-14 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.fr | |||||
| 2023-11-14 | 2023-11-14 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.fr | |||||
| 2021-01-20 | 2021-01-20 | Validation Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2017-09-26 | 2017-09-27 | Differential gene expression analysis Statistical calculation RNA-Seq analysis Sequence composition calculation Sequence alignment Nucleic acid sequence analysis Sequencing quality control | https://usegalaxy.org | |||||
| 2018-12-24 | 2019-02-11 | Sequence composition calculation Statistical calculation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2023-02-20 | 2023-03-07 | AGPL-3.0-or-later | Differential gene expression analysis Statistical calculation RNA-Seq analysis RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.eu | ||||
| 2022-10-18 | 2022-11-23 | Statistical calculation Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.org | |||||
| 2023-05-04 | 2023-05-04 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2021-11-09 | 2023-09-20 | Statistical calculation RNA-Seq quantification Sequence composition calculation Read mapping Validation Differential gene expression analysis RNA-Seq analysis Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2022-11-23 | 2022-11-30 | Statistical calculation Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.org | |||||
| 2022-11-28 | 2022-11-30 | Statistical calculation Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.org | |||||
| 2022-11-28 | 2022-11-30 | Statistical calculation Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.org | |||||
| 2022-11-28 | 2022-11-30 | Statistical calculation Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.org | |||||
| 2022-11-28 | 2022-11-30 | Statistical calculation Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.org | |||||
| 2022-11-28 | 2022-11-30 | Statistical calculation Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.org | |||||
| 2020-12-16 | 2021-12-01 | Statistical calculation Data handling RNA-Seq quantification Gene expression analysis Sequence composition calculation Primer removal Sequence annotation Sequence trimming RNA-Seq analysis Read pre-processing Sequencing quality control | https://usegalaxy.org | |||||
| 2023-09-19 | 2023-09-19 | Sequence alignment Nucleic acid sequence analysis | https://usegalaxy.fr | |||||
| 2020-07-30 | 2020-08-08 | RNA-Seq analysis Read summarisation Sequence alignment RNA-Seq quantification | RNAseq DE Differential expression HISAT2 featureCounts EdgeR limmavoom DESeq2 transcriptomics mouse multiple | https://usegalaxy.org | ||||
| 2022-01-18 | 2022-01-18 | Statistical calculation Data handling RNA-Seq quantification Gene expression analysis Sequence composition calculation Primer removal Sequence annotation Sequence trimming RNA-Seq analysis Read pre-processing Sequencing quality control | https://usegalaxy.org | |||||
| 2014-01-05 | 2014-06-23 | Sequence composition calculation Statistical calculation Formatting Sequencing quality control | https://usegalaxy.org | |||||
| 2012-06-20 | 2012-09-11 | https://usegalaxy.org | ||||||
| 2012-05-03 | 2012-05-03 | https://usegalaxy.org | ||||||
| 2012-04-25 | 2012-04-25 | https://usegalaxy.org | ||||||
| 2012-03-30 | 2012-04-16 | https://usegalaxy.org | ||||||
| 2024-02-19 | 2024-02-19 | Statistical calculation Data handling RNA-Seq quantification Gene expression analysis Sequence composition calculation Primer removal Sequence annotation Sequence trimming RNA-Seq analysis Read pre-processing Sequencing quality control | RNASeq Master 2024 | https://usegalaxy.eu | ||||
| 2022-03-20 | 2022-03-21 | Statistical calculation Data handling RNA-Seq quantification Gene expression analysis Sequence composition calculation Primer removal Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Sequencing quality control | https://usegalaxy.org | |||||
| 2023-01-12 | 2023-01-12 | Statistical calculation Data handling RNA-Seq quantification Sequence composition calculation Mapping Read mapping Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Variant calling Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org | |||||
| 2019-04-22 | 2019-04-22 | Statistical calculation Sequence composition calculation Primer removal Sequence trimming RNA-Seq analysis Read pre-processing Sequence alignment Nucleic acid sequence analysis Sequencing quality control | https://usegalaxy.org | |||||
| 2023-05-14 | 2024-05-19 | Validation Statistical calculation Sequence composition calculation Sequence alignment Nucleic acid sequence analysis Sequencing quality control | https://usegalaxy.eu | |||||
| 2024-10-07 | 2024-10-07 | MIT | Data handling Sequence alignment analysis Mapping Primer removal Validation Sequence trimming Read pre-processing Sequence alignment Sequencing quality control | RNASEQ | WorkflowHub | |||
| 2024-10-07 | 2024-10-07 | MIT | Data handling Sequence alignment analysis Mapping Primer removal Validation Sequence trimming Read pre-processing Sequence alignment Sequencing quality control | RNASEQ | WorkflowHub | |||
| 2018-11-07 | 2018-11-08 | Sequence alignment Nucleic acid sequence analysis | https://usegalaxy.org | |||||
| 2016-06-28 | 2016-06-29 | Differential gene expression analysis RNA-Seq analysis Nucleic acid sequence analysis | https://usegalaxy.org | |||||
| 2016-11-07 | 2016-11-16 | Statistical calculation Sequence trimming Sequence composition calculation Read pre-processing Primer removal Sequencing quality control | https://usegalaxy.org | |||||
| 2019-05-07 | 2019-05-07 | Statistical calculation Data handling Sequence composition calculation Primer removal Sequence trimming RNA-Seq analysis Read pre-processing Sequence alignment Nucleic acid sequence analysis Sequencing quality control | https://usegalaxy.org | |||||
| 2016-05-31 | 2016-06-03 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org | |||||
| 2020-06-16 | 2020-06-17 | Statistical calculation RNA-Seq quantification Sequence composition calculation Read mapping Validation Differential gene expression analysis RNA-Seq analysis Read summarisation Sequencing quality control | RNASeq Bacteria FastQC MultiQC Trimmomatic Bowtie2 featureCounts DESeq2 | https://usegalaxy.org | ||||
| 2016-05-31 | 2016-06-03 | Nucleic acid sequence analysis | https://usegalaxy.org | |||||
| 2016-06-01 | 2016-06-03 | Differential gene expression analysis RNA-Seq analysis | https://usegalaxy.org | |||||
| 2021-02-23 | 2021-03-01 | Statistical calculation RNA-Seq quantification Sequence composition calculation Read mapping Primer removal Sequence trimming Read pre-processing Read summarisation Nucleic acid sequence analysis Sequencing quality control | rnaseq paired-end prokaryotes bowtie2 htseq featurecounts collections | https://usegalaxy.org | ||||
| 2024-06-04 | 2024-06-04 | MIT | Data handling Sequence alignment analysis Mapping Primer removal Validation Sequence trimming Read pre-processing Sequence alignment Sequencing quality control | RNAseq cloud-costs | https://usegalaxy.org | |||
| 2024-05-28 | 2024-05-28 | MIT | Data handling Sequence alignment analysis Mapping Primer removal Validation Sequence trimming Read pre-processing Sequence alignment Sequencing quality control | RNAseq | https://usegalaxy.org.au | |||
| 2022-11-03 | 2022-11-03 | MIT | Data handling Sequence alignment analysis Mapping Primer removal Validation Sequence trimming Read pre-processing Sequence alignment Sequencing quality control | RNAseq | https://usegalaxy.eu | |||
| 2022-11-03 | 2022-11-03 | MIT | Data handling Sequence alignment analysis Mapping Primer removal Validation Sequence trimming Read pre-processing Sequence alignment Sequencing quality control | RNAseq | https://usegalaxy.org | |||
| 2022-12-01 | 2022-12-01 | MIT | Data handling Sequence alignment analysis Mapping Primer removal Validation Sequence trimming Read pre-processing Sequence alignment Sequencing quality control | RNAseq | https://usegalaxy.eu | |||
| 2022-12-01 | 2022-12-01 | MIT | Data handling Sequence alignment analysis Mapping Primer removal Validation Sequence trimming Read pre-processing Sequence alignment Sequencing quality control | RNAseq | https://usegalaxy.org | |||
| 2023-01-19 | 2023-01-19 | MIT | Data handling Sequence alignment analysis Mapping Primer removal Validation Sequence trimming Read pre-processing Sequence alignment Sequencing quality control | RNAseq | https://usegalaxy.eu | |||
| 2023-01-19 | 2023-01-19 | MIT | Data handling Sequence alignment analysis Mapping Primer removal Validation Sequence trimming Read pre-processing Sequence alignment Sequencing quality control | RNAseq | https://usegalaxy.org | |||
| 2023-01-19 | 2023-01-19 | MIT | Data handling Sequence alignment analysis Mapping Primer removal Validation Sequence trimming Read pre-processing Sequence alignment Sequencing quality control | RNAseq | https://usegalaxy.eu | |||
| 2023-01-19 | 2023-01-19 | MIT | Data handling Sequence alignment analysis Mapping Primer removal Validation Sequence trimming Read pre-processing Sequence alignment Sequencing quality control | RNAseq | https://usegalaxy.org | |||
| 2023-09-21 | 2023-09-21 | MIT | Data handling Sequence alignment analysis Mapping Primer removal Validation Sequence trimming Read pre-processing Sequence alignment Sequencing quality control | RNAseq | https://usegalaxy.eu | |||
| 2023-09-21 | 2023-09-21 | MIT | Data handling Sequence alignment analysis Mapping Primer removal Validation Sequence trimming Read pre-processing Sequence alignment Sequencing quality control | RNAseq | https://usegalaxy.org | |||
| 2023-09-21 | 2023-09-21 | MIT | Validation RNA-Seq analysis Transcriptome assembly Sequence trimming Read pre-processing Sequence alignment Primer removal Sequencing quality control | RNAseq | https://usegalaxy.eu | |||
| 2023-09-21 | 2023-09-21 | MIT | Validation RNA-Seq analysis Transcriptome assembly Sequence trimming Read pre-processing Sequence alignment Primer removal Sequencing quality control | RNAseq | https://usegalaxy.org | |||
| 2024-03-21 | 2024-03-21 | MIT | Validation RNA-Seq analysis Transcriptome assembly Sequence trimming Read pre-processing Sequence alignment Primer removal Sequencing quality control | RNAseq | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | MIT | Validation RNA-Seq analysis Transcriptome assembly Sequence trimming Read pre-processing Sequence alignment Primer removal Sequencing quality control | RNAseq | https://usegalaxy.org.au | |||
| 2024-09-19 | 2024-09-19 | MIT | Validation RNA-Seq analysis Transcriptome assembly Sequence trimming Read pre-processing Sequence alignment Primer removal Sequencing quality control | RNAseq | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | MIT | Validation RNA-Seq analysis Transcriptome assembly Sequence trimming Read pre-processing Sequence alignment Primer removal Sequencing quality control | RNAseq | https://usegalaxy.org | |||
| 2024-09-19 | 2024-09-19 | MIT | Validation RNA-Seq analysis Transcriptome assembly Sequence trimming Read pre-processing Sequence alignment Primer removal Sequencing quality control | RNAseq | https://usegalaxy.org.au | |||
| 2024-09-19 | 2024-09-19 | MIT | Validation RNA-Seq analysis Transcriptome assembly Sequence trimming Read pre-processing Sequence alignment Primer removal Sequencing quality control | RNAseq | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | MIT | Validation RNA-Seq analysis Transcriptome assembly Sequence trimming Read pre-processing Sequence alignment Primer removal Sequencing quality control | RNAseq | https://usegalaxy.org | |||
| 2024-09-26 | 2024-09-26 | MIT | Validation RNA-Seq analysis Transcriptome assembly Sequence trimming Read pre-processing Sequence alignment Primer removal Sequencing quality control | RNAseq | https://usegalaxy.eu | |||
| 2024-09-26 | 2024-09-26 | MIT | Validation RNA-Seq analysis Transcriptome assembly Sequence trimming Read pre-processing Sequence alignment Primer removal Sequencing quality control | RNAseq | https://usegalaxy.org | |||
| 2024-09-26 | 2024-09-26 | MIT | Validation RNA-Seq analysis Transcriptome assembly Sequence trimming Read pre-processing Sequence alignment Primer removal Sequencing quality control | RNAseq | https://usegalaxy.org.au | |||
| 2022-12-01 | 2022-12-01 | MIT | Data handling Sequence alignment analysis Mapping Primer removal Validation Sequence trimming Read pre-processing Sequence alignment Sequencing quality control | RNAseq | https://usegalaxy.eu | |||
| 2022-12-01 | 2022-12-01 | MIT | Data handling Sequence alignment analysis Mapping Primer removal Validation Sequence trimming Read pre-processing Sequence alignment Sequencing quality control | RNAseq | https://usegalaxy.org | |||
| 2023-01-19 | 2023-01-19 | MIT | Data handling Sequence alignment analysis Mapping Primer removal Validation Sequence trimming Read pre-processing Sequence alignment Sequencing quality control | RNAseq | https://usegalaxy.eu | |||
| 2023-01-19 | 2023-01-19 | MIT | Data handling Sequence alignment analysis Mapping Primer removal Validation Sequence trimming Read pre-processing Sequence alignment Sequencing quality control | RNAseq | https://usegalaxy.org | |||
| 2023-09-21 | 2023-09-21 | MIT | Data handling Sequence alignment analysis Mapping Primer removal Validation Sequence trimming Read pre-processing Sequence alignment Sequencing quality control | RNAseq | https://usegalaxy.eu | |||
| 2023-09-21 | 2023-09-21 | MIT | Data handling Sequence alignment analysis Mapping Primer removal Validation Sequence trimming Read pre-processing Sequence alignment Sequencing quality control | RNAseq | https://usegalaxy.org | |||
| 2023-09-21 | 2023-09-21 | MIT | Validation RNA-Seq analysis Transcriptome assembly Sequence trimming Read pre-processing Sequence alignment Primer removal Sequencing quality control | RNAseq | https://usegalaxy.eu | |||
| 2023-09-21 | 2023-09-21 | MIT | Validation RNA-Seq analysis Transcriptome assembly Sequence trimming Read pre-processing Sequence alignment Primer removal Sequencing quality control | RNAseq | https://usegalaxy.org | |||
| 2024-03-21 | 2024-03-21 | MIT | Validation RNA-Seq analysis Transcriptome assembly Sequence trimming Read pre-processing Sequence alignment Primer removal Sequencing quality control | RNAseq | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | MIT | Validation RNA-Seq analysis Transcriptome assembly Sequence trimming Read pre-processing Sequence alignment Primer removal Sequencing quality control | RNAseq | https://usegalaxy.org.au | |||
| 2024-09-19 | 2024-09-19 | MIT | Validation RNA-Seq analysis Transcriptome assembly Sequence trimming Read pre-processing Sequence alignment Primer removal Sequencing quality control | RNAseq | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | MIT | Validation RNA-Seq analysis Transcriptome assembly Sequence trimming Read pre-processing Sequence alignment Primer removal Sequencing quality control | RNAseq | https://usegalaxy.org | |||
| 2024-09-19 | 2024-09-19 | MIT | Validation RNA-Seq analysis Transcriptome assembly Sequence trimming Read pre-processing Sequence alignment Primer removal Sequencing quality control | RNAseq | https://usegalaxy.org.au | |||
| 2024-09-19 | 2024-09-19 | MIT | Validation RNA-Seq analysis Transcriptome assembly Sequence trimming Read pre-processing Sequence alignment Primer removal Sequencing quality control | RNAseq | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | MIT | Validation RNA-Seq analysis Transcriptome assembly Sequence trimming Read pre-processing Sequence alignment Primer removal Sequencing quality control | RNAseq | https://usegalaxy.org | |||
| 2024-09-26 | 2024-09-26 | MIT | Validation RNA-Seq analysis Transcriptome assembly Sequence trimming Read pre-processing Sequence alignment Primer removal Sequencing quality control | RNAseq | https://usegalaxy.eu | |||
| 2024-09-26 | 2024-09-26 | MIT | Validation RNA-Seq analysis Transcriptome assembly Sequence trimming Read pre-processing Sequence alignment Primer removal Sequencing quality control | RNAseq | https://usegalaxy.org | |||
| 2024-09-26 | 2024-09-26 | MIT | Validation RNA-Seq analysis Transcriptome assembly Sequence trimming Read pre-processing Sequence alignment Primer removal Sequencing quality control | RNAseq | https://usegalaxy.org.au | |||
| 2024-01-16 | 2024-01-22 | Statistical calculation Formatting Sequence composition calculation Read mapping Primer removal Validation Sequence trimming Read pre-processing Sequencing quality control | https://usegalaxy.org | |||||
| 2022-12-06 | 2023-02-13 | CC-BY-4.0 | Differential gene expression analysis RNA-Seq analysis Read mapping Nucleic acid sequence analysis | WorkflowHub | ||||
| 2020-01-06 | 2020-02-13 | Differential gene expression analysis RNA-Seq analysis Read mapping Nucleic acid sequence analysis | https://usegalaxy.eu | |||||
| 2019-09-30 | 2021-03-23 | Statistical calculation Data handling Sequence composition calculation Primer removal Sequence trimming RNA-Seq analysis Read pre-processing Sequence alignment Nucleic acid sequence analysis Sequencing quality control | https://usegalaxy.org | |||||
| 2017-09-26 | 2017-09-27 | Differential gene expression analysis RNA-Seq analysis | https://usegalaxy.org | |||||
| 2014-07-20 | 2021-01-28 | Sequence composition calculation Statistical calculation Formatting Sequencing quality control | rnaseq tophat2 fastq protein_interaction miRNA_target_prediction network_construction de_genes splice_variants | https://usegalaxy.org | ||||
| 2014-07-01 | 2014-07-01 | https://usegalaxy.org | ||||||
| 2021-05-05 | 2021-05-05 | Statistical calculation Genome visualisation Genome indexing Sequence composition calculation Read mapping RNA-Seq analysis Transcriptome assembly Generation Sequence alignment Nucleic acid sequence analysis Sequencing quality control | https://usegalaxy.org.au | |||||
| 2019-01-26 | 2019-03-04 | Data handling | https://usegalaxy.org | |||||
| 2023-10-20 | 2024-04-16 | Statistical calculation Generation Genome indexing Sequence composition calculation Read mapping Sequence alignment Sequencing quality control | https://usegalaxy.org.au | |||||
| 2013-01-29 | 2013-01-29 | https://usegalaxy.org | ||||||
| 2019-01-09 | 2019-03-03 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org | |||||
| 2018-11-13 | 2018-11-13 | saf gtf | https://usegalaxy.org | |||||
| 2022-07-12 | 2022-07-12 | Statistical calculation Formatting Data handling RNA-Seq quantification Gene expression analysis Sequence composition calculation RNA-Seq analysis Pathway or network analysis Sequencing quality control | https://usegalaxy.eu | |||||
| 2022-01-28 | 2022-01-28 | Statistical calculation Visualisation Genome assembly Sequence composition calculation Aggregation Sequence assembly validation Sequencing quality control | https://usegalaxy.org | |||||
| 2022-04-10 | 2022-08-02 | Variant calling DNA barcoding | https://usegalaxy.org | |||||
| 2013-01-21 | 2013-03-15 | intervals bedtools slop | https://usegalaxy.org | |||||
| 2020-12-15 | 2021-01-01 | Read mapping | https://usegalaxy.eu | |||||
| 2023-01-19 | 2024-05-06 | MIT | Sequence read processing Phylogenetic analysis Taxonomic classification Data handling Sequence file editing Demultiplexing Visualisation Sequence clustering DNA barcoding Sequencing quality control | https://usegalaxy.fr | ||||
| 2017-05-03 | 2017-05-24 | Variant calling Formatting Read mapping Statistical calculation | https://usegalaxy.org | |||||
| 2022-03-02 | 2022-03-06 | Data handling Genome assembly Read mapping Aggregation Pairwise sequence alignment Sequence contamination filtering Validation Box-Whisker plot plotting Sequence file editing Sequencing quality control Sequence assembly visualisation Scatter plot plotting | GTN assembly | https://usegalaxy.org.au | ||||
| 2022-03-18 | 2022-03-18 | MIT | Genome indexing Read mapping Tree-based sequence alignment Variant calling Sequence contamination filtering Methylation analysis SNP detection Validation Variant classification Generation Sequence alignment Sequencing quality control | COVID-19 ARTIC iwc | https://usegalaxy.eu | |||
| 2022-06-02 | 2022-06-02 | MIT | Genome indexing Read mapping Tree-based sequence alignment Variant calling Sequence contamination filtering Methylation analysis SNP detection Validation Variant classification Generation Sequence alignment Sequencing quality control | COVID-19 ARTIC iwc | https://usegalaxy.org | |||
| 2022-03-18 | 2022-03-18 | MIT | Genome indexing Read mapping Tree-based sequence alignment Variant calling Sequence contamination filtering Methylation analysis SNP detection Validation Variant classification Generation Sequence alignment Sequencing quality control | COVID-19 ARTIC iwc | https://usegalaxy.eu | |||
| 2022-06-02 | 2022-06-02 | MIT | Genome indexing Read mapping Tree-based sequence alignment Variant calling Sequence contamination filtering Methylation analysis SNP detection Validation Variant classification Generation Sequence alignment Sequencing quality control | COVID-19 ARTIC iwc | https://usegalaxy.org | |||
| 2022-03-18 | 2022-03-18 | MIT | Genome indexing Read mapping Tree-based sequence alignment Variant calling Sequence contamination filtering Methylation analysis SNP detection Validation Variant classification Generation Sequence alignment Sequencing quality control | COVID-19 ARTIC iwc | https://usegalaxy.eu | |||
| 2022-06-02 | 2022-06-02 | MIT | Genome indexing Read mapping Tree-based sequence alignment Variant calling Sequence contamination filtering Methylation analysis SNP detection Validation Variant classification Generation Sequence alignment Sequencing quality control | COVID-19 ARTIC iwc | https://usegalaxy.org | |||
| 2024-01-18 | 2024-01-18 | MIT | Genome indexing Read mapping Tree-based sequence alignment Variant calling Sequence contamination filtering Methylation analysis SNP detection Validation Variant classification Generation Sequence alignment Sequencing quality control | COVID-19 ARTIC iwc | https://usegalaxy.eu | |||
| 2024-01-18 | 2024-01-18 | MIT | Genome indexing Read mapping Tree-based sequence alignment Variant calling Sequence contamination filtering Methylation analysis SNP detection Validation Variant classification Generation Sequence alignment Sequencing quality control | COVID-19 ARTIC iwc | https://usegalaxy.org | |||
| 2024-01-18 | 2024-01-18 | MIT | Genome indexing Read mapping Tree-based sequence alignment Variant calling Sequence contamination filtering Methylation analysis SNP detection Validation Variant classification Generation Sequence alignment Sequencing quality control | COVID-19 ARTIC iwc | https://usegalaxy.org.au | |||
| 2021-09-24 | 2021-09-24 | MIT | Genome indexing Read mapping Tree-based sequence alignment Variant calling Sequence contamination filtering Methylation analysis SNP detection Validation Variant classification Generation Sequence alignment Sequencing quality control | COVID-19 ARTIC iwc | https://usegalaxy.eu | |||
| 2023-06-28 | 2023-06-30 | MIT | Genome alignment Read mapping Read binning Validation Sequence contamination filtering Sequence trimming RNA-Seq analysis SNP detection Filtering Sequence alignment Sequencing quality control | ARTIC SANBI SARS-CoV-2 covid-19 | WorkflowHub | |||
| 2023-06-29 | 2023-06-29 | CC-BY-4.0 | Box-Whisker plot plotting Genome alignment Filtering Sequence alignment Scatter plot plotting | SANBI SARS-CoV-2 nanopore | WorkflowHub | |||
| 2020-09-21 | 2020-09-21 | https://usegalaxy.eu | ||||||
| 2023-06-28 | 2023-06-28 | CC-BY-4.0 | Variant calling Genome visualisation Methylation analysis | SANBI SARS-CoV-2 | WorkflowHub | |||
| 2020-04-09 | 2020-04-10 | Pairwise sequence alignment Genome assembly | https://usegalaxy.eu | |||||
| 2022-10-25 | 2024-01-14 | MIT | Mapping | covid-19 covid19.galaxyproject.org | WorkflowHub | |||
| 2023-06-29 | 2023-07-01 | Statistical calculation Genome visualisation Genome indexing Sequence composition calculation Read mapping Generation Sequence alignment Sequencing quality control | sequence-analysis | https://usegalaxy.org | ||||
| 2023-06-21 | 2023-06-29 | Statistical calculation Genome visualisation Genome indexing Sequence composition calculation Read mapping Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2021-12-21 | 2024-06-14 | MIT | Statistical calculation Base-calling Mapping Variant calling SNP detection Validation Sequence contamination filtering Pairwise sequence alignment Sequence assembly Sequencing quality control | ARTIC ONT covid-19 covid19.galaxyproject.org | WorkflowHub | |||
| 2024-10-07 | 2024-10-07 | MIT | Genome indexing Read mapping Tree-based sequence alignment Variant calling Sequence contamination filtering Methylation analysis SNP detection Validation Variant classification Generation Sequence alignment Sequencing quality control | WorkflowHub | ||||
| 2024-10-07 | 2024-10-07 | MIT | Validation SNP detection Sequence contamination filtering Genome indexing Generation Read mapping Sequence alignment Sequencing quality control | ARTIC BY-COVID covid-19 covid19.galaxyproject.org | WorkflowHub | |||
| 2021-12-21 | 2024-06-29 | MIT | Formatting Genome indexing Read mapping Validation Sequence contamination filtering SNP detection Generation Sequence alignment Sequencing quality control | covid-19 covid19.galaxyproject.org emergen_validated iwc | WorkflowHub | |||
| 2021-12-21 | 2024-07-03 | MIT | Validation Sequence contamination filtering SNP detection Formatting Read mapping Sequencing quality control | covid-19 covid19.galaxyproject.org | WorkflowHub | |||
| 2024-10-07 | 2024-10-07 | MIT | WorkflowHub | |||||
| 2020-06-03 | 2020-06-29 | Mapping Formatting Pairwise sequence alignment | name:covid-19 name:ONT name:DRS | https://usegalaxy.eu | ||||
| 2020-08-28 | 2020-08-30 | Mapping | COVID-19 ONT covid19.galaxyproject.org | https://usegalaxy.eu | ||||
| 2021-03-03 | 2021-03-03 | Mapping | COVID-19 ONT covid19.galaxyproject.org | https://usegalaxy.org.au | ||||
| 2020-07-09 | 2020-09-07 | COVID-19 ONT covid19.galaxyproject.org | https://usegalaxy.eu | |||||
| 2021-03-03 | 2021-03-03 | COVID-19 ONT covid19.galaxyproject.org | https://usegalaxy.org.au | |||||
| 2020-06-19 | 2020-07-10 | Pairwise sequence alignment | name:covid-19 name:ONT name:DRS name:publish | https://usegalaxy.eu | ||||
| 2020-07-14 | 2020-08-30 | Pairwise sequence alignment Formatting | COVID-19 ONT covid19.galaxyproject.org | https://usegalaxy.eu | ||||
| 2021-03-03 | 2021-03-03 | Pairwise sequence alignment Formatting | COVID-19 ONT covid19.galaxyproject.org | https://usegalaxy.org.au | ||||
| 2020-06-14 | 2020-06-19 | name:covid-19 name:ONT name:DRS | https://usegalaxy.eu | |||||
| 2020-06-03 | 2020-07-08 | k-mer counting PolyA signal detection Methylation analysis Post-translation modification site prediction Collapsing methods Genotyping | name:covid-19 name:ONT name:DRS | https://usegalaxy.eu | ||||
| 2020-07-04 | 2020-07-14 | k-mer counting PolyA signal detection Post-translation modification site prediction Genotyping | name:covid-19 name:ONT name:DRS name:publish | https://usegalaxy.eu | ||||
| 2020-06-09 | 2020-07-08 | name:covid-19 name:ONT name:DRS | https://usegalaxy.eu | |||||
| 2020-06-29 | 2020-07-14 | name:covid-19 name:ONT name:DRS name:publish | https://usegalaxy.eu | |||||
| 2024-04-16 | 2024-04-16 | Statistical calculation Genome visualisation Genome indexing Sequence composition calculation Read mapping Generation Sequence alignment Sequencing quality control | https://usegalaxy.org.au | |||||
| 2023-03-01 | 2024-05-27 | MIT | Ecology earth-system satellite | https://usegalaxy.eu | ||||
| 2017-07-04 | 2017-07-04 | Statistical calculation Formatting Data handling Sequence alignment analysis Genome indexing Sequence composition calculation Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2017-06-30 | 2017-06-30 | Variant calling Formatting Statistical calculation Genome indexing Generation Read mapping Sequence alignment | https://usegalaxy.org | |||||
| 2018-10-25 | 2018-10-25 | Statistical calculation Data handling Genome assembly Genome indexing Sequence composition calculation Sequence file editing Read mapping Aggregation Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2022-12-22 | 2023-02-03 | CC-BY-4.0 | Data handling | VGP_curated | https://usegalaxy.eu | |||
| 2022-12-15 | 2023-02-02 | CC-BY-4.0 | Data handling Genome assembly Mapping Scaffolding Visualisation Transcriptome assembly Sequence alignment Sequence assembly validation | VGP_curated | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Data handling Genome assembly Mapping Scaffolding Visualisation Transcriptome assembly Sequence alignment Sequence assembly validation | VGP_curated | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Data handling Genome assembly Mapping Scaffolding Visualisation Transcriptome assembly Sequence alignment Sequence assembly validation | VGP_curated | https://usegalaxy.org | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Data handling Genome assembly Mapping Scaffolding Visualisation Transcriptome assembly Sequence alignment Sequence assembly validation | VGP_curated | https://usegalaxy.org.au | |||
| 2023-11-09 | 2023-11-09 | CC-BY-4.0 | Visualisation Data handling | VGP_curated | https://usegalaxy.eu | |||
| 2023-11-09 | 2023-11-09 | CC-BY-4.0 | Visualisation Data handling | VGP_curated | https://usegalaxy.org | |||
| 2023-11-13 | 2023-11-13 | CC-BY-4.0 | Visualisation Data handling | VGP_curated | https://usegalaxy.org.au | |||
| 2023-11-16 | 2023-11-16 | CC-BY-4.0 | Visualisation Data handling | VGP_curated | https://usegalaxy.eu | |||
| 2023-11-16 | 2023-11-16 | CC-BY-4.0 | Visualisation Data handling | VGP_curated | https://usegalaxy.org | |||
| 2023-11-16 | 2023-11-16 | CC-BY-4.0 | Visualisation Data handling | VGP_curated | https://usegalaxy.org.au | |||
| 2024-03-07 | 2024-03-07 | CC-BY-4.0 | Visualisation Data handling | VGP_curated | https://usegalaxy.eu | |||
| 2024-03-07 | 2024-03-07 | CC-BY-4.0 | Visualisation Data handling | VGP_curated | https://usegalaxy.org | |||
| 2024-03-07 | 2024-03-07 | CC-BY-4.0 | Visualisation Data handling | VGP_curated | https://usegalaxy.org.au | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Visualisation Data handling | VGP_curated | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Visualisation Data handling | VGP_curated | https://usegalaxy.org | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Visualisation Data handling | VGP_curated | https://usegalaxy.org.au | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Visualisation Data handling | VGP_curated | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Visualisation Data handling | VGP_curated | https://usegalaxy.org | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Visualisation Data handling | VGP_curated | https://usegalaxy.org.au | |||
| 2024-10-07 | 2024-10-13 | CC-BY-4.0 | Visualisation Data handling | WorkflowHub | ||||
| 2023-11-09 | 2023-11-09 | CC-BY-4.0 | Data handling Genome assembly Mapping Scaffolding Visualisation Transcriptome assembly Sequence alignment Sequence assembly validation | VGP_curated | https://usegalaxy.eu | |||
| 2023-11-09 | 2023-11-09 | CC-BY-4.0 | Data handling Genome assembly Mapping Scaffolding Visualisation Transcriptome assembly Sequence alignment Sequence assembly validation | VGP_curated | https://usegalaxy.org | |||
| 2023-11-13 | 2023-11-13 | CC-BY-4.0 | Data handling Genome assembly Mapping Scaffolding Visualisation Transcriptome assembly Sequence alignment Sequence assembly validation | VGP_curated | https://usegalaxy.org.au | |||
| 2023-11-09 | 2023-11-09 | CC-BY-4.0 | Data handling Genome assembly Mapping Scaffolding Visualisation Transcriptome assembly Sequence alignment Sequence assembly validation | VGP_curated | https://usegalaxy.eu | |||
| 2023-11-09 | 2023-11-09 | CC-BY-4.0 | Data handling Genome assembly Mapping Scaffolding Visualisation Transcriptome assembly Sequence alignment Sequence assembly validation | VGP_curated | https://usegalaxy.org | |||
| 2023-11-13 | 2023-11-13 | CC-BY-4.0 | Data handling Genome assembly Mapping Scaffolding Visualisation Transcriptome assembly Sequence alignment Sequence assembly validation | VGP_curated | https://usegalaxy.org.au | |||
| 2023-11-16 | 2023-11-16 | CC-BY-4.0 | Data handling Genome assembly Mapping Scaffolding Visualisation Transcriptome assembly Sequence alignment Sequence assembly validation | VGP_curated | https://usegalaxy.eu | |||
| 2023-11-23 | 2023-11-23 | CC-BY-4.0 | Data handling Genome assembly Mapping Scaffolding Visualisation Transcriptome assembly Sequence alignment Sequence assembly validation | VGP_curated | https://usegalaxy.org | |||
| 2023-12-14 | 2023-12-14 | CC-BY-4.0 | Data handling Genome assembly Mapping Scaffolding Visualisation Transcriptome assembly Sequence alignment Sequence assembly validation | VGP_curated | https://usegalaxy.org.au | |||
| 2023-11-23 | 2023-11-23 | CC-BY-4.0 | Data handling Genome assembly Mapping Scaffolding Visualisation Transcriptome assembly Sequence alignment Sequence assembly validation | VGP_curated | https://usegalaxy.eu | |||
| 2023-11-23 | 2023-11-23 | CC-BY-4.0 | Data handling Genome assembly Mapping Scaffolding Visualisation Transcriptome assembly Sequence alignment Sequence assembly validation | VGP_curated | https://usegalaxy.org | |||
| 2023-12-14 | 2023-12-14 | CC-BY-4.0 | Data handling Genome assembly Mapping Scaffolding Visualisation Transcriptome assembly Sequence alignment Sequence assembly validation | VGP_curated | https://usegalaxy.org.au | |||
| 2023-11-30 | 2023-11-30 | CC-BY-4.0 | Data handling Genome assembly Mapping Scaffolding Visualisation Transcriptome assembly Sequence alignment Sequence assembly validation | VGP_curated | https://usegalaxy.eu | |||
| 2023-11-30 | 2023-11-30 | CC-BY-4.0 | Data handling Genome assembly Mapping Scaffolding Visualisation Transcriptome assembly Sequence alignment Sequence assembly validation | VGP_curated | https://usegalaxy.org | |||
| 2023-12-14 | 2023-12-14 | CC-BY-4.0 | Data handling Genome assembly Mapping Scaffolding Visualisation Transcriptome assembly Sequence alignment Sequence assembly validation | VGP_curated | https://usegalaxy.org.au | |||
| 2024-03-28 | 2024-03-28 | CC-BY-4.0 | Data handling Genome assembly Mapping Scaffolding Visualisation Transcriptome assembly Sequence alignment Sequence assembly validation | VGP_curated | https://usegalaxy.eu | |||
| 2024-03-28 | 2024-03-28 | CC-BY-4.0 | Data handling Genome assembly Mapping Scaffolding Visualisation Transcriptome assembly Sequence alignment Sequence assembly validation | VGP_curated | https://usegalaxy.org.au | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Data handling Genome assembly Mapping Scaffolding Visualisation Transcriptome assembly Sequence alignment Sequence assembly validation | VGP_curated | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Data handling Genome assembly Mapping Scaffolding Visualisation Transcriptome assembly Sequence alignment Sequence assembly validation | VGP_curated | https://usegalaxy.org | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Data handling Genome assembly Mapping Scaffolding Visualisation Transcriptome assembly Sequence alignment Sequence assembly validation | VGP_curated | https://usegalaxy.org.au | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Data handling Genome assembly Mapping Scaffolding Visualisation Transcriptome assembly Sequence alignment Sequence assembly validation | VGP_curated | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Data handling Genome assembly Mapping Scaffolding Visualisation Transcriptome assembly Sequence alignment Sequence assembly validation | VGP_curated | https://usegalaxy.org | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Data handling Genome assembly Mapping Scaffolding Visualisation Transcriptome assembly Sequence alignment Sequence assembly validation | VGP_curated | https://usegalaxy.org.au | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Data handling Genome assembly Mapping Scaffolding Visualisation Transcriptome assembly Sequence alignment Sequence assembly validation | VGP_curated | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Data handling Genome assembly Mapping Scaffolding Visualisation Transcriptome assembly Sequence alignment Sequence assembly validation | VGP_curated | https://usegalaxy.org | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Data handling Genome assembly Mapping Scaffolding Visualisation Transcriptome assembly Sequence alignment Sequence assembly validation | VGP_curated | https://usegalaxy.org.au | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Data handling Genome assembly Mapping Scaffolding Visualisation Transcriptome assembly Sequence alignment Sequence assembly validation | VGP_curated | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Data handling Genome assembly Mapping Scaffolding Visualisation Transcriptome assembly Sequence alignment Sequence assembly validation | VGP_curated | https://usegalaxy.org | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Data handling Genome assembly Mapping Scaffolding Visualisation Transcriptome assembly Sequence alignment Sequence assembly validation | VGP_curated | https://usegalaxy.org.au | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Data handling Genome assembly Mapping Scaffolding Visualisation Transcriptome assembly Sequence alignment Sequence assembly validation | VGP_curated | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Data handling Genome assembly Mapping Scaffolding Visualisation Transcriptome assembly Sequence alignment Sequence assembly validation | VGP_curated | https://usegalaxy.org | |||
| 2024-09-19 | 2024-09-19 | CC-BY-4.0 | Data handling Genome assembly Mapping Scaffolding Visualisation Transcriptome assembly Sequence alignment Sequence assembly validation | VGP_curated | https://usegalaxy.org.au | |||
| 2024-10-07 | 2024-10-07 | CC-BY-4.0 | Data handling Genome assembly Mapping Scaffolding Visualisation Transcriptome assembly Sequence alignment Sequence assembly validation | WorkflowHub | ||||
| 2019-01-23 | 2019-01-23 | RNA C/D-box snoRNA | https://usegalaxy.eu | |||||
| 2024-02-13 | 2024-04-22 | Scannotation XCMS | https://usegalaxy.eu | |||||
| 2023-06-06 | 2023-07-14 | CC-BY-4.0 | https://usegalaxy.eu | |||||
| 2019-11-25 | 2019-11-25 | Differential gene expression analysis | https://usegalaxy.eu | |||||
| 2020-04-15 | 2020-04-22 | Sequencing quality control Read pre-processing Sequence visualisation | transcriptomics galaxy-training-network | https://usegalaxy.org.au | ||||
| 2020-11-12 | 2020-12-07 | https://usegalaxy.eu | ||||||
| 2020-11-12 | 2020-12-07 | https://usegalaxy.eu | ||||||
| 2020-11-12 | 2020-12-07 | https://usegalaxy.eu | ||||||
| 2020-11-12 | 2020-12-07 | https://usegalaxy.eu | ||||||
| 2020-11-12 | 2020-12-07 | https://usegalaxy.eu | ||||||
| 2020-11-12 | 2020-12-07 | https://usegalaxy.eu | ||||||
| 2021-03-23 | 2021-04-24 | Differential gene expression analysis | transcriptomics single-cell | https://usegalaxy.eu | ||||
| 2023-12-28 | 2023-12-28 | MIT | RNA-Seq quantification | name:single-cell | https://usegalaxy.eu | |||
| 2023-12-28 | 2023-12-28 | MIT | RNA-Seq quantification | name:single-cell | https://usegalaxy.org | |||
| 2024-02-08 | 2024-02-08 | MIT | RNA-Seq quantification | name:single-cell | https://usegalaxy.eu | |||
| 2024-02-08 | 2024-02-08 | MIT | RNA-Seq quantification | name:single-cell | https://usegalaxy.org | |||
| 2024-09-19 | 2024-09-19 | MIT | RNA-Seq quantification | name:single-cell | https://usegalaxy.org.au | |||
| 2024-03-07 | 2024-03-07 | MIT | RNA-Seq quantification | name:single-cell | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | MIT | RNA-Seq quantification | name:single-cell | https://usegalaxy.org.au | |||
| 2024-04-11 | 2024-04-11 | MIT | RNA-Seq quantification | name:single-cell | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | MIT | RNA-Seq quantification | name:single-cell | https://usegalaxy.org | |||
| 2024-09-19 | 2024-09-19 | MIT | RNA-Seq quantification | name:single-cell | https://usegalaxy.org.au | |||
| 2024-09-26 | 2024-09-26 | MIT | RNA-Seq quantification | name:single-cell | https://usegalaxy.eu | |||
| 2024-09-26 | 2024-09-26 | MIT | RNA-Seq quantification | name:single-cell | https://usegalaxy.org | |||
| 2024-09-26 | 2024-09-26 | MIT | RNA-Seq quantification | name:single-cell | https://usegalaxy.org.au | |||
| 2023-12-28 | 2023-12-28 | MIT | Validation Community profiling Sequence alignment Loading Sequencing quality control | name:single-cell | https://usegalaxy.eu | |||
| 2023-12-28 | 2023-12-28 | MIT | Validation Community profiling Sequence alignment Loading Sequencing quality control | name:single-cell | https://usegalaxy.org | |||
| 2023-12-28 | 2023-12-28 | MIT | Validation Community profiling Sequence alignment Loading Sequencing quality control | name:single-cell | https://usegalaxy.org.au | |||
| 2024-02-08 | 2024-02-08 | MIT | Validation Community profiling Sequence alignment Loading Sequencing quality control | name:single-cell | https://usegalaxy.eu | |||
| 2024-02-22 | 2024-02-22 | MIT | Validation Community profiling Sequence alignment Loading Sequencing quality control | name:single-cell | https://usegalaxy.org | |||
| 2024-02-08 | 2024-02-08 | MIT | Validation Community profiling Sequence alignment Loading Sequencing quality control | name:single-cell | https://usegalaxy.org.au | |||
| 2024-03-07 | 2024-03-07 | MIT | Validation Community profiling Sequence alignment Loading Sequencing quality control | name:single-cell | https://usegalaxy.eu | |||
| 2024-03-07 | 2024-03-07 | MIT | Validation Community profiling Sequence alignment Loading Sequencing quality control | name:single-cell | https://usegalaxy.org | |||
| 2024-03-07 | 2024-03-07 | MIT | Validation Community profiling Sequence alignment Loading Sequencing quality control | name:single-cell | https://usegalaxy.org.au | |||
| 2024-04-11 | 2024-04-11 | MIT | Validation Community profiling Sequence alignment Loading Sequencing quality control | name:single-cell | https://usegalaxy.eu | |||
| 2024-04-11 | 2024-04-11 | MIT | Validation Community profiling Sequence alignment Loading Sequencing quality control | name:single-cell | https://usegalaxy.org | |||
| 2024-04-11 | 2024-04-11 | MIT | Validation Community profiling Sequence alignment Loading Sequencing quality control | name:single-cell | https://usegalaxy.org.au | |||
| 2024-09-26 | 2024-09-26 | MIT | Validation Community profiling Sequence alignment Loading Sequencing quality control | name:single-cell | https://usegalaxy.eu | |||
| 2024-09-26 | 2024-09-26 | MIT | Validation Community profiling Sequence alignment Loading Sequencing quality control | name:single-cell | https://usegalaxy.org | |||
| 2024-09-26 | 2024-09-26 | MIT | Validation Community profiling Sequence alignment Loading Sequencing quality control | name:single-cell | https://usegalaxy.org.au | |||
| 2022-12-01 | 2023-12-19 | https://usegalaxy.eu | ||||||
| 2023-09-07 | 2023-09-14 | scESIS | https://usegalaxy.org | |||||
| 2021-09-08 | 2021-09-21 | Community profiling Loading | scRNAseq 10X single-cell transcriptomics | https://usegalaxy.org.au | ||||
| 2021-09-08 | 2021-09-21 | Community profiling Loading | scRNAseq 10X single-cell transcriptomics | https://usegalaxy.org.au | ||||
| 2021-09-08 | 2021-09-21 | scRNAseq single-cell transcriptomics | https://usegalaxy.org.au | |||||
| 2023-11-09 | 2024-05-30 | other-closed | scRNAseq | WorkflowHub | ||||
| 2024-05-30 | 2024-05-30 | MIT | Gene expression Transcriptomics | scRNAseq | WorkflowHub | |||
| 2023-12-12 | 2024-05-30 | MIT | scRNAseq | WorkflowHub | ||||
| 2021-09-21 | 2022-03-23 | scRNAseq single-cell transcriptomics | https://usegalaxy.org.au | |||||
| 2021-09-14 | 2021-10-06 | Differential gene expression analysis | scRNAseq single-cell transcriptomics | https://usegalaxy.org.au | ||||
| 2021-09-14 | 2021-10-06 | Differential gene expression analysis | scRNAseq single-cell transcriptomics | https://usegalaxy.org.au | ||||
| 2021-09-14 | 2021-10-05 | Differential gene expression analysis | scRNAseq single-cell transcriptomics | https://usegalaxy.org.au | ||||
| 2024-05-30 | 2024-05-30 | MIT | Gene expression Transcriptomics | scRNAseq | WorkflowHub | |||
| 2024-05-30 | 2024-05-30 | MIT | Gene expression Transcriptomics | Sequence alignment | scRNAseq | WorkflowHub | ||
| 2024-05-30 | 2024-05-30 | MIT | Gene expression Transcriptomics | scRNAseq | WorkflowHub | |||
| 2024-05-30 | 2024-05-30 | MIT | Gene expression Transcriptomics | Differential gene expression analysis | scRNAseq | WorkflowHub | ||
| 2024-05-30 | 2024-05-30 | MIT | Gene expression Transcriptomics | Differential gene expression analysis | scRNAseq | WorkflowHub | ||
| 2016-04-03 | 2016-04-03 | https://usegalaxy.org | ||||||
| 2020-06-10 | 2020-07-16 | Filtering Formatting | https://usegalaxy.eu | |||||
| 2019-10-29 | 2019-10-29 | https://usegalaxy.eu | ||||||
| 2019-10-28 | 2019-10-28 | https://usegalaxy.eu | ||||||
| 2019-09-19 | 2019-09-30 | https://usegalaxy.eu | ||||||
| 2022-10-28 | 2022-10-28 | https://usegalaxy.eu | ||||||
| 2016-03-18 | 2016-03-18 | final tested published | https://usegalaxy.eu | |||||
| 2015-12-11 | 2016-03-11 | https://usegalaxy.eu | ||||||
| 2019-10-24 | 2019-10-24 | https://usegalaxy.eu | ||||||
| 2019-02-05 | 2019-10-24 | https://usegalaxy.eu | ||||||
| 2022-01-21 | 2022-01-21 | MIT | Dev | https://usegalaxy.eu | ||||
| 2024-03-07 | 2024-03-07 | MIT | Visualisation Image annotation Data handling Image analysis | https://usegalaxy.eu | ||||
| 2021-03-19 | 2021-03-19 | galaxy-interface galaxy-training-network | https://usegalaxy.org.au | |||||
| 2019-07-01 | 2019-08-12 | https://usegalaxy.org | ||||||
| 2021-01-18 | 2021-01-28 | https://usegalaxy.eu | ||||||
| 2022-04-14 | 2024-09-24 | Genome indexing Generation Read mapping Sequence alignment | https://usegalaxy.org.au | |||||
| 2024-09-06 | 2024-09-24 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2024-09-07 | 2024-09-24 | Sequence contamination filtering Statistical calculation Antimicrobial resistance prediction Genome assembly Sequence composition calculation Sequencing quality control | Assembly Bacterial | https://usegalaxy.org.au | ||||
| 2024-09-11 | 2024-10-02 | Statistical calculation Genome indexing Sequence composition calculation Read mapping Validation SNP detection Sequence contamination filtering Generation Sequence alignment Sequencing quality control | COVID-19 ARTIC | https://usegalaxy.org.au | ||||
| 2024-10-15 | 2024-10-18 | Genome visualisation | IO | https://usegalaxy.org.au | ||||
| 2024-10-17 | 2024-10-17 | Statistical calculation Genome indexing Sequence composition calculation Read mapping Validation SNP detection Sequence contamination filtering Generation Sequence alignment Sequencing quality control | COVID-19 ARTIC | https://usegalaxy.org.au | ||||
| 2024-02-15 | 2024-02-15 | CC-BY-4.0 | Climate | WorkflowHub | ||||
| 2015-09-25 | 2015-09-25 | https://usegalaxy.org | ||||||
| 2020-06-07 | 2020-06-11 | Statistical calculation Formatting Data handling Sequence composition calculation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2023-09-05 | 2023-09-06 | https://usegalaxy.eu | ||||||
| 2017-02-09 | 2017-02-09 | https://usegalaxy.org | ||||||
| 2020-05-19 | 2020-05-19 | https://usegalaxy.eu | ||||||
| 2022-06-25 | 2022-06-29 | https://usegalaxy.eu | ||||||
| 2023-07-14 | 2023-07-19 | Statistical calculation Formatting Heat map generation Filtering Standardisation and normalisation Protein quantification Visualisation Imputation Clustering Principal component plotting | https://usegalaxy.eu | |||||
| 2024-04-23 | 2024-04-23 | CC-BY-4.0 | astronomy | WorkflowHub | ||||
| 2024-04-10 | 2024-04-11 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2013-07-19 | 2013-07-19 | https://usegalaxy.org | ||||||
| 2023-08-09 | 2023-08-09 | Phylogenetic tree visualisation Genome visualisation Variant calling Phylogenetic tree generation | https://usegalaxy.org | |||||
| 2023-03-23 | 2023-03-23 | CC-BY-4.0 | Validation Peak detection Chromatographic alignment Mass spectrum visualisation Filtering Chromatogram visualisation Label-free quantification | lc-msms metabolomics esi positive w4m dda 2023 | https://usegalaxy.fr | |||
| 2013-12-21 | 2013-12-21 | https://usegalaxy.org | ||||||
| 2018-01-29 | 2018-04-30 | ASaiM | https://usegalaxy.eu | |||||
| 2021-03-30 | 2021-03-30 | Genome assembly | Salmonella serotyping Illumina raw reads | https://usegalaxy.eu | ||||
| 2014-03-14 | 2015-07-26 | Sequence analysis Sequence alignment analysis Sequence alignment Local alignment Global alignment | https://usegalaxy.eu | |||||
| 2019-02-11 | 2020-02-13 | Statistical calculation Genome assembly Sequence composition calculation Coding region prediction Genome annotation Visualisation Gene prediction Sequence assembly validation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2019-02-11 | 2021-03-11 | Phylogenetic analysis Sequence analysis Phylogenetic tree analysis Genome assembly Phylogenetic tree generation Phylogenetic tree reconstruction | https://usegalaxy.org.au | |||||
| 2024-05-08 | 2024-05-08 | Statistical calculation Data handling RNA-Seq quantification Gene expression analysis Sequence composition calculation Primer removal Sequence annotation Sequence trimming RNA-Seq analysis Read pre-processing Sequencing quality control | https://usegalaxy.eu | |||||
| 2023-05-19 | 2023-05-19 | https://usegalaxy.eu | ||||||
| 2018-08-13 | 2019-05-10 | Statistical calculation Genome assembly Phylogenetic tree generation Sequence composition calculation Optimisation and refinement Coding region prediction Phylogenetic tree visualisation Variant calling Genome annotation Gene prediction Sequence assembly Sequencing quality control | https://usegalaxy.org.au | |||||
| 2023-10-12 | 2023-10-12 | Mapping | https://usegalaxy.org | |||||
| 2020-04-07 | 2020-04-07 | computational-chemistry galaxy-training-network | https://usegalaxy.org.au | |||||
| 2020-08-31 | 2020-08-31 | Formatting Data handling Genome indexing Read mapping Validation Sequence contamination filtering SNP detection Generation Sequence alignment Sequencing quality control | variant-analysis galaxy-training-network | https://usegalaxy.org.au | ||||
| 2021-08-12 | 2021-08-12 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Sequence trimming Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2021-10-29 | 2021-10-29 | Read summarisation Sequence alignment RNA-Seq quantification | https://usegalaxy.eu | |||||
| 2024-05-12 | 2024-05-26 | Statistical calculation Data handling RNA-Seq quantification Gene expression analysis Sequence composition calculation Primer removal Sequence annotation Sequence trimming RNA-Seq analysis Read pre-processing Sequencing quality control | UAM 2024 | https://usegalaxy.eu | ||||
| 2021-06-16 | 2021-06-16 | cheminformatics moleculardynamics computational-chemistry | https://usegalaxy.eu | |||||
| 2020-02-27 | 2020-07-03 | Statistical calculation RNA-Seq quantification Sequence composition calculation Validation RNA-Seq analysis Transcriptome assembly Read summarisation Sequence alignment Sequencing quality control | https://usegalaxy.eu | |||||
| 2020-05-24 | 2020-05-24 | Sequencing quality control Read pre-processing Sequence visualisation | transcriptomics single-cell | https://usegalaxy.eu | ||||
| 2022-05-04 | 2022-05-04 | https://usegalaxy.org | ||||||
| 2021-08-12 | 2021-08-12 | Statistical calculation RNA-Seq quantification Sequence composition calculation Read mapping Primer removal Sequence trimming Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2019-01-17 | 2019-01-17 | RNA miRNA-seq clustering classification | https://usegalaxy.eu | |||||
| 2013-03-20 | 2013-03-20 | https://usegalaxy.org | ||||||
| 2012-02-26 | 2012-02-26 | https://usegalaxy.org | ||||||
| 2024-03-14 | 2024-03-15 | MIT | Pairwise sequence alignment | https://usegalaxy.eu | ||||
| 2021-04-30 | 2023-02-01 | Formatting Data handling RNA-Seq quantification Primer removal Validation Sequence trimming Read summarisation Read pre-processing Sequence alignment Sequencing quality control | https://usegalaxy.eu | |||||
| 2024-01-03 | 2024-03-12 | Scaffolding Transcriptome assembly Sequence assembly validation Genome assembly | https://usegalaxy.eu | |||||
| 2024-03-12 | 2024-04-17 | Scaffolding Transcriptome assembly Sequence assembly validation Genome assembly | https://usegalaxy.eu | |||||
| 2022-03-21 | 2022-03-21 | Phylogenetic tree visualisation Variant calling Phylogenetic tree generation | https://usegalaxy.eu | |||||
| 2023-02-19 | 2023-02-19 | CC-BY-4.0 | Formatting Sequence alignment | https://usegalaxy.org | ||||
| 2023-02-19 | 2023-02-19 | CC-BY-4.0 | Formatting Sequence alignment | https://usegalaxy.org | ||||
| 2022-02-18 | 2022-04-07 | Phylogenetic tree visualisation Genome visualisation Variant calling Phylogenetic tree generation | https://usegalaxy.org | |||||
| 2016-06-30 | 2016-06-30 | Formatting Read mapping | https://usegalaxy.org | |||||
| 2016-06-30 | 2017-01-09 | Formatting Read mapping | https://usegalaxy.org | |||||
| 2014-11-24 | 2014-11-25 | https://usegalaxy.org | ||||||
| 2014-02-04 | 2014-09-30 | https://usegalaxy.org | ||||||
| 2010-09-16 | 2010-09-16 | snp ngs pileup bowtie | https://usegalaxy.org | |||||
| 2022-02-05 | 2022-02-05 | Mapping | https://usegalaxy.eu | |||||
| 2021-01-21 | 2021-01-21 | https://usegalaxy.eu | ||||||
| 2020-05-03 | 2020-08-10 | https://usegalaxy.org.au | ||||||
| 2016-06-14 | 2016-07-11 | https://usegalaxy.org | ||||||
| 2011-01-17 | 2011-01-17 | https://usegalaxy.org | ||||||
| 2010-10-05 | 2010-10-27 | Convert Map FAIRE | https://usegalaxy.org | |||||
| 2023-06-16 | 2023-06-19 | GPL-3.0-or-later | SNP annotation | cancer | https://usegalaxy.eu | |||
| 2023-06-16 | 2023-06-19 | GPL-3.0-or-later | Statistical calculation Genome alignment Sequence composition calculation Genome indexing Read mapping Variant calling Validation Copy number estimation Generation Sequencing quality control Sequence alignment Sequence visualisation | cancer | https://usegalaxy.eu | |||
| 2023-11-23 | 2024-04-03 | GPL-3.0 | Copy number variation Data visualisation Genetic variation | Statistical calculation Genome alignment Sequence composition calculation Genome indexing Read mapping Variant calling Validation Copy number estimation Generation Sequencing quality control Sequence alignment Sequence visualisation | MIRACUM hCNV variant-analysis | WorkflowHub | ||
| 2023-11-22 | 2024-01-16 | AGPL-3.0-or-later | Statistical calculation Genome alignment Sequence composition calculation Genome indexing Read mapping Variant calling Validation Copy number estimation Generation Sequencing quality control Sequence alignment Sequence visualisation | hCNV variant-analysis MIRACUM | https://usegalaxy.eu | |||
| 2022-10-06 | 2022-10-06 | https://usegalaxy.eu | ||||||
| 2022-10-07 | 2022-10-07 | https://usegalaxy.org | ||||||
| 2021-12-25 | 2021-12-25 | Formatting Genome indexing Read mapping Validation Sequence contamination filtering Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2017-07-17 | 2017-07-17 | https://usegalaxy.org | ||||||
| 2012-04-03 | 2013-08-07 | BAM | https://usegalaxy.org | |||||
| 2011-08-24 | 2011-08-25 | MACS BAM CHiP-seq | https://usegalaxy.org | |||||
| 2012-04-03 | 2014-02-18 | https://usegalaxy.org | ||||||
| 2013-08-28 | 2013-12-06 | https://usegalaxy.org | ||||||
| 2013-08-12 | 2013-08-12 | https://usegalaxy.org | ||||||
| 2011-01-17 | 2011-01-17 | https://usegalaxy.org | ||||||
| 2010-11-03 | 2010-11-03 | https://usegalaxy.org | ||||||
| 2021-04-28 | 2021-05-11 | https://usegalaxy.eu | ||||||
| 2021-04-19 | 2021-04-28 | https://usegalaxy.eu | ||||||
| 2023-11-10 | 2023-11-10 | CC-BY-4.0 | Biodiversity Ecology | WorkflowHub | ||||
| 2023-05-30 | 2023-11-10 | https://usegalaxy.eu | ||||||
| 2013-07-09 | 2013-07-09 | https://usegalaxy.org | ||||||
| 2024-09-27 | 2024-10-03 | MIT | Genome annotation | https://usegalaxy.org | ||||
| 2022-02-18 | 2022-02-23 | Image analysis | https://usegalaxy.eu | |||||
| 2021-04-23 | 2021-09-29 | https://usegalaxy.org | ||||||
| 2021-11-04 | 2021-11-04 | https://usegalaxy.org | ||||||
| 2021-04-05 | 2021-04-23 | https://usegalaxy.eu | ||||||
| 2023-02-23 | 2023-02-23 | Data handling | https://usegalaxy.org | |||||
| 2024-07-02 | 2024-07-03 | MIT | Data handling | WorkflowHub | ||||
| 2023-10-26 | 2023-10-26 | MIT | Data handling | https://usegalaxy.eu | ||||
| 2023-11-23 | 2023-11-23 | MIT | Data handling | https://usegalaxy.org | ||||
| 2023-11-23 | 2023-11-23 | MIT | Data handling | https://usegalaxy.org | ||||
| 2023-11-30 | 2023-11-30 | MIT | Data handling | https://usegalaxy.org | ||||
| 2024-02-08 | 2024-02-08 | MIT | Data handling | https://usegalaxy.org | ||||
| 2024-09-19 | 2024-09-19 | MIT | Data handling | https://usegalaxy.org | ||||
| 2024-05-30 | 2024-05-30 | MIT | Data handling | https://usegalaxy.org | ||||
| 2024-05-23 | 2024-05-23 | MIT | Data handling | https://usegalaxy.org | ||||
| 2024-05-16 | 2024-05-16 | MIT | Data handling | https://usegalaxy.org | ||||
| 2024-05-09 | 2024-05-09 | MIT | Data handling | https://usegalaxy.org | ||||
| 2024-05-02 | 2024-05-02 | MIT | Data handling | https://usegalaxy.org | ||||
| 2024-04-25 | 2024-04-25 | MIT | Data handling | https://usegalaxy.org | ||||
| 2024-09-19 | 2024-09-19 | MIT | Data handling | https://usegalaxy.org | ||||
| 2024-05-30 | 2024-05-30 | MIT | Data handling | https://usegalaxy.org | ||||
| 2024-05-23 | 2024-05-23 | MIT | Data handling | https://usegalaxy.org | ||||
| 2024-05-16 | 2024-05-16 | MIT | Data handling | https://usegalaxy.org | ||||
| 2024-09-19 | 2024-09-19 | MIT | Data handling | https://usegalaxy.org | ||||
| 2024-09-19 | 2024-09-19 | MIT | Data handling | https://usegalaxy.org | ||||
| 2024-06-03 | 2024-06-04 | Read mapping Data handling | https://usegalaxy.org | |||||
| 2021-03-19 | 2021-03-19 | Statistical calculation Sequence trimming Sequence composition calculation Read pre-processing Sequence alignment Primer removal Sequencing quality control | transcriptomics galaxy-training-network | https://usegalaxy.org.au | ||||
| 2021-03-19 | 2021-03-19 | Differential gene expression analysis RNA-Seq analysis RNA-Seq quantification Gene expression analysis Sequence composition calculation | transcriptomics galaxy-training-network | https://usegalaxy.org.au | ||||
| 2019-01-17 | 2019-01-17 | Statistical calculation Sequence trimming Sequence composition calculation Read pre-processing Sequence alignment Primer removal Sequencing quality control | RNA sRNA-seq pre-processing | https://usegalaxy.eu | ||||
| 2019-01-17 | 2019-01-17 | Differential gene expression analysis RNA-Seq analysis RNA-Seq quantification Gene expression analysis Sequence composition calculation | RNA sRNA-seq | https://usegalaxy.eu | ||||
| 2017-12-13 | 2018-10-16 | https://usegalaxy.org | ||||||
| 2018-08-29 | 2018-10-16 | https://usegalaxy.org | ||||||
| 2022-05-31 | 2023-01-30 | Apache-2.0 | Population genomics | WorkflowHub | ||||
| 2023-05-25 | 2023-05-25 | https://usegalaxy.eu | ||||||
| 2022-04-05 | 2022-05-31 | https://usegalaxy.org.au | ||||||
| 2022-05-31 | 2023-01-30 | Apache-2.0 | Population genomics | Validation Sequence alignment Sequencing quality control | WorkflowHub | |||
| 2022-05-16 | 2022-05-31 | Validation Sequence alignment Sequencing quality control | https://usegalaxy.org.au | |||||
| 2024-08-02 | 2024-08-08 | CC-BY-4.0 | Differential gene expression analysis | scATAC-seq epigenetics name:single-cell | https://usegalaxy.eu | |||
| 2014-10-28 | 2014-12-09 | https://usegalaxy.org | ||||||
| 2019-04-15 | 2019-12-10 | Validation Differential gene expression analysis Statistical calculation RNA-Seq analysis Sequence composition calculation Sequence alignment Nucleic acid sequence analysis Sequencing quality control | https://usegalaxy.eu | |||||
| 2020-06-29 | 2020-06-29 | Differential gene expression analysis Community profiling Sequence alignment Loading | ralf | https://usegalaxy.eu | ||||
| 2015-04-19 | 2015-04-19 | https://usegalaxy.org | ||||||
| 2024-04-18 | 2024-04-18 | CC-BY-4.0 | Physics | astronomy | WorkflowHub | |||
| 2021-09-28 | 2021-09-28 | https://usegalaxy.org | ||||||
| 2021-04-24 | 2021-04-29 | Validation Genome indexing Generation Read mapping Sequence alignment Sequencing quality control | MIRACUM | https://usegalaxy.eu | ||||
| 2020-06-18 | 2023-02-13 | Apache-2.0 | Sequence database search Formatting Sequence profile generation Statistical calculation de Novo sequencing Format validation De-novo assembly Read mapping Coding region prediction Differential gene expression analysis Sequence clustering Generation Data retrieval Sequencing quality control Data handling Genome indexing Database search Sequence annotation Validation Sequence contamination filtering RNA-Seq analysis Transcriptome assembly Gene prediction Conversion Probabilistic sequence generation Sequence generation Multiple sequence alignment Sequence alignment | Alignment Annotation Assembly RNASEQ StringTie covid-19 | WorkflowHub | |||
| 2023-05-25 | 2023-05-25 | CC-BY-NC-4.0 | WorkflowHub | |||||
| 2020-11-30 | 2020-11-30 | Read summarisation Sequence alignment RNA-Seq quantification Sequencing quality control | https://usegalaxy.eu | |||||
| 2020-11-30 | 2020-11-30 | Read summarisation Sequence alignment RNA-Seq quantification Sequencing quality control | https://usegalaxy.eu | |||||
| 2015-06-23 | 2015-06-23 | Sequence analysis Sequence alignment analysis Sequence alignment Local alignment Global alignment | https://usegalaxy.eu | |||||
| 2015-06-23 | 2015-06-23 | Sequence analysis Sequence alignment analysis Sequence alignment Local alignment Global alignment | https://usegalaxy.eu | |||||
| 2022-08-12 | 2022-11-29 | GPL-3.0-or-later | scrna deconvolution | https://usegalaxy.eu | ||||
| 2019-03-05 | 2019-03-07 | Mapping | https://usegalaxy.org | |||||
| 2014-03-27 | 2014-06-03 | https://usegalaxy.org | ||||||
| 2021-03-19 | 2021-03-19 | galaxy-interface galaxy-training-network | https://usegalaxy.org.au | |||||
| 2022-11-19 | 2022-11-19 | MIT | AIV | https://usegalaxy.eu | ||||
| 2011-04-11 | 2011-11-14 | https://usegalaxy.org | ||||||
| 2011-04-07 | 2017-01-12 | https://usegalaxy.org | ||||||
| 2020-05-19 | 2020-05-19 | https://usegalaxy.eu | ||||||
| 2020-05-19 | 2020-05-19 | https://usegalaxy.eu | ||||||
| 2023-06-14 | 2023-07-13 | https://usegalaxy.eu | ||||||
| 2023-05-04 | 2023-07-13 | https://usegalaxy.eu | ||||||
| 2023-03-26 | 2023-07-10 | https://usegalaxy.eu | ||||||
| 2023-04-17 | 2023-07-13 | https://usegalaxy.eu | ||||||
| 2023-06-01 | 2023-07-13 | https://usegalaxy.eu | ||||||
| 2022-11-03 | 2022-11-03 | Genome assembly De-novo assembly Genome indexing Read mapping Analysis Generation Box-Whisker plot plotting Cross-assembly Mapping assembly Read alignment Sequence assembly Sequence assembly visualisation Sequence alignment Scatter plot plotting | https://usegalaxy.org | |||||
| 2018-06-26 | 2018-06-26 | Sequence analysis Sequence alignment analysis Sequence alignment Local alignment Global alignment | https://usegalaxy.eu | |||||
| 2023-12-12 | 2024-01-09 | Sequence contamination filtering Sequence assembly Read pre-processing Read mapping Sequence merging Sequencing quality control | https://usegalaxy.eu | |||||
| 2019-11-25 | 2020-01-11 | moleculardynamics | https://usegalaxy.eu | |||||
| 2020-08-31 | 2020-08-31 | proteomics galaxy-training-network | https://usegalaxy.org.au | |||||
| 2022-02-05 | 2022-02-05 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.eu | |||||
| 2022-02-05 | 2022-02-05 | Validation Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2023-05-19 | 2023-05-19 | Read mapping | https://usegalaxy.eu | |||||
| 2024-02-11 | 2024-02-17 | Statistical calculation Formatting Data handling De-novo assembly Sequence composition calculation Sequence comparison Sequence annotation Validation Sequence contamination filtering RNA-Seq analysis Visualisation Transcriptome assembly Sequence analysis Sequence assembly validation Sequence alignment Protein sequence analysis Sequencing quality control | https://usegalaxy.eu | |||||
| 2021-06-22 | 2021-06-24 | Statistical calculation Phylogenetic analysis Formatting Sequence alignment analysis Phylogenetic inference Primer removal Species frequency estimation Sequence similarity search Sequencing quality control Taxonomic classification Sequence composition calculation Sequence comparison Phylogenetic tree visualisation Validation Sequence trimming Visualisation Phylogenetic tree analysis Conversion Read pre-processing Nucleic acid sequence analysis Phylogenetic tree editing | asaim | https://usegalaxy.eu | ||||
| 2023-12-14 | 2023-12-14 | MIT | Statistical calculation Visualisation Taxonomic classification Phylogenetic tree analysis Nucleic acid sequence analysis Aggregation | Metagenomics name:microGalaxy | https://usegalaxy.eu | |||
| 2023-10-02 | 2024-10-15 | Statistical calculation Visualisation Taxonomic classification Aggregation | metagenomics shotgun GUCFG2Galaxy name:Collection | https://usegalaxy.org.au | ||||
| 2024-09-19 | 2024-09-19 | MIT | Visualisation Taxonomic classification Aggregation | name:Collection name:microGalaxy name:PathoGFAIR name:IWC | https://usegalaxy.eu | |||
| 2024-09-19 | 2024-09-19 | MIT | Visualisation Taxonomic classification Aggregation | name:Collection name:microGalaxy name:PathoGFAIR name:IWC | https://usegalaxy.org | |||
| 2024-09-19 | 2024-09-19 | MIT | Visualisation Taxonomic classification Aggregation | name:Collection name:microGalaxy name:PathoGFAIR name:IWC | https://usegalaxy.org.au | |||
| 2023-05-11 | 2024-06-05 | MIT | Visualisation Taxonomic classification Aggregation | name:Collection name:microGalaxy name:PathoGFAIR name:IWC | https://usegalaxy.eu | |||
| 2024-06-25 | 2024-06-25 | MIT | Visualisation Taxonomic classification Aggregation | name:Collection name:microGalaxy name:PathoGFAIR name:IWC | https://usegalaxy.org | |||
| 2024-06-25 | 2024-06-25 | MIT | Visualisation Taxonomic classification Aggregation | name:Collection name:microGalaxy name:PathoGFAIR name:IWC | https://usegalaxy.org.au | |||
| 2023-04-12 | 2024-06-19 | MIT | Taxonomic classification | name:collection name:microGalaxy name:GTN | https://usegalaxy.eu | |||
| 2024-06-26 | 2024-07-15 | MIT | Visualisation Taxonomic classification Aggregation | WorkflowHub | ||||
| 2024-06-07 | 2024-06-12 | AGPL-3.0-or-later | Genetic variation Infectious disease Microbiology Public health and epidemiology Sequence assembly | Sequence alignment analysis Taxonomic classification Phylogenetic tree generation Local alignment Global alignment Phylogenetic tree visualisation Sequence contamination filtering Variant calling Sequence analysis Validation Antimicrobial resistance prediction Sequence alignment Sequencing quality control | pathogen tuberculosis | WorkflowHub | ||
| 2023-10-26 | 2024-08-19 | AGPL-3.0-or-later | Taxonomic classification Sequence alignment analysis Phylogenetic tree generation Local alignment Global alignment Phylogenetic tree visualisation Variant calling Validation Sequence contamination filtering Sequence analysis Antimicrobial resistance prediction Sequence alignment Sequencing quality control | pathogen tuberculosis | https://usegalaxy.eu | |||
| 2021-05-20 | 2021-06-16 | https://usegalaxy.eu | ||||||
| 2020-04-09 | 2020-04-09 | https://usegalaxy.eu | ||||||
| 2010-02-18 | 2010-02-18 | https://usegalaxy.org | ||||||
| 2012-06-01 | 2012-06-15 | https://usegalaxy.org | ||||||
| 2016-09-21 | 2017-12-03 | Fasta Tabular FASTQ | https://usegalaxy.org | |||||
| 2021-02-02 | 2021-02-02 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.eu | |||||
| 2023-05-02 | 2023-05-02 | Sequence trimming Read pre-processing Primer removal | https://usegalaxy.org.au | |||||
| 2010-09-01 | 2010-09-01 | https://usegalaxy.org | ||||||
| 2023-06-11 | 2023-07-13 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.eu | |||||
| 2012-10-12 | 2012-10-12 | Multiple sequence alignment | https://usegalaxy.org | |||||
| 2023-11-09 | 2023-11-09 | https://usegalaxy.org | ||||||
| 2023-08-22 | 2023-08-22 | https://usegalaxy.eu | ||||||
| 2014-03-17 | 2014-09-04 | https://usegalaxy.org | ||||||
| 2021-09-29 | 2021-09-30 | Read mapping | https://usegalaxy.org | |||||
| 2020-05-29 | 2021-04-17 | Sequence contamination filtering Read mapping Sequencing quality control | Tetrahymena Mapping-by-sequencing | https://usegalaxy.eu | ||||
| 2021-10-30 | 2021-10-30 | Variant calling Sequence contamination filtering Statistical calculation Read mapping Sequencing quality control | https://usegalaxy.eu | |||||
| 2012-06-23 | 2012-06-24 | https://usegalaxy.org | ||||||
| 2015-02-18 | 2015-02-19 | https://usegalaxy.org | ||||||
| 2016-02-22 | 2016-02-22 | https://usegalaxy.eu | ||||||
| 2016-01-27 | 2016-01-27 | https://usegalaxy.eu | ||||||
| 2022-03-11 | 2022-03-11 | Statistical calculation Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequence annotation Sequencing quality control | https://usegalaxy.org | |||||
| 2023-05-03 | 2023-05-03 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2023-05-03 | 2023-05-03 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2024-06-06 | 2024-06-19 | CC-BY-4.0 | Compound libraries and screening Computational chemistry Data mining Small molecules | Spectral library search Format validation Filtering Annotation Standardisation and normalisation | Bioinformatics Cheminformatics Metabolomics | WorkflowHub | ||
| 2024-04-11 | 2024-04-11 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2022-06-16 | 2022-09-12 | Sequence trimming Read pre-processing Primer removal | TnSeq WilsonLab | https://usegalaxy.org | ||||
| 2019-06-27 | 2022-10-31 | Sequence trimming Read pre-processing Read mapping Primer removal | https://usegalaxy.org | |||||
| 2013-03-09 | 2017-05-05 | https://usegalaxy.org | ||||||
| 2012-03-14 | 2012-03-14 | https://usegalaxy.org | ||||||
| 2021-11-16 | 2021-11-21 | Validation Statistical calculation Sequence composition calculation Nucleic acid sequence analysis Sequencing quality control | https://usegalaxy.eu | |||||
| 2021-08-11 | 2021-08-11 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Sequence trimming Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2022-02-14 | 2022-02-28 | Statistical calculation Data handling Genome assembly Sequence composition calculation Primer removal Aggregation Coding region prediction Scaffolding Genome annotation Visualisation Sequence trimming Transcriptome assembly Gene prediction Read pre-processing Sequence assembly validation Sequencing quality control | https://usegalaxy.eu | |||||
| 2024-09-30 | 2024-10-01 | AGPL-3.0-or-later | VCF Chromosomepainting Phylogenomics | https://usegalaxy.fr | ||||
| 2024-03-26 | 2024-03-27 | MIT | Genome visualisation Genome assembly Scaffolding Sequence analysis Transcriptome assembly Genome annotation Gene prediction Sequence assembly validation | https://usegalaxy.fr | ||||
| 2023-12-12 | 2023-12-19 | MIT | Sequence read processing Phylogenetic analysis Taxonomic classification Data handling Sequence file editing Demultiplexing Visualisation Sequence clustering DNA barcoding Sequencing quality control | https://usegalaxy.fr | ||||
| 2023-01-25 | 2023-01-25 | https://usegalaxy.eu | ||||||
| 2023-12-14 | 2023-12-14 | Validation Sequence contamination filtering Statistical calculation Visualisation Taxonomic classification Sequence composition calculation Sequencing quality control | metagenomics name:microGalaxy | https://usegalaxy.eu | ||||
| 2021-03-19 | 2021-03-19 | Validation Sequence contamination filtering Statistical calculation Visualisation Taxonomic classification Sequence composition calculation Sequencing quality control | metagenomics galaxy-training-network | https://usegalaxy.org.au | ||||
| 2023-04-24 | 2023-04-27 | Sequence read processing Phylogenetic analysis Taxonomic classification Phylogenetic tree generation Visualisation Sequence clustering Phylogenetic tree analysis DNA barcoding Phylogenetic tree reconstruction Sequencing quality control | metagenomics | https://usegalaxy.eu | ||||
| 2024-09-30 | 2024-10-01 | Sequence read processing Phylogenetic analysis Taxonomic classification Phylogenetic tree generation Visualisation Sequence clustering Phylogenetic tree analysis DNA barcoding Phylogenetic tree reconstruction Sequencing quality control | microbiome | https://usegalaxy.eu | ||||
| 2023-12-14 | 2023-12-14 | Sequence read processing Phylogenetic analysis Taxonomic classification Phylogenetic tree generation Visualisation Sequence clustering Phylogenetic tree analysis DNA barcoding Phylogenetic tree reconstruction Sequencing quality control | metagenomics name:microGalaxy | https://usegalaxy.eu | ||||
| 2021-03-19 | 2021-03-19 | Sequence read processing Phylogenetic analysis Taxonomic classification Phylogenetic tree generation Visualisation Sequence clustering Phylogenetic tree analysis DNA barcoding Phylogenetic tree reconstruction Sequencing quality control | metagenomics galaxy-training-network | https://usegalaxy.org.au | ||||
| 2022-09-14 | 2023-05-05 | CC-BY-4.0 | name:trajectory_analysis name:transcriptomics name:scRNA-seq name:single_cell | https://usegalaxy.eu | ||||
| 2022-12-18 | 2022-12-19 | name:trajectory_analysis name:single_cell name:R name:RStudio | https://usegalaxy.eu | |||||
| 2016-07-13 | 2016-08-25 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org | |||||
| 2016-05-27 | 2016-06-03 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org | |||||
| 2018-12-07 | 2018-12-07 | Genome indexing Generation Read mapping Sequence alignment | https://usegalaxy.org | |||||
| 2011-09-26 | 2012-06-27 | StitchGeneblocks MAF FASTA | https://usegalaxy.org | |||||
| 2024-01-21 | 2024-06-09 | Mapping | https://usegalaxy.eu | |||||
| 2024-02-08 | 2024-02-27 | Read mapping | https://usegalaxy.eu | |||||
| 2024-03-31 | 2024-09-19 | Pairwise sequence alignment Mapping Sequence alignment Protein sequence analysis | https://usegalaxy.eu | |||||
| 2024-03-01 | 2024-03-04 | MIT | Pairwise sequence alignment Structure visualisation Genome annotation Genome visualisation Data handling Pathway visualisation Sequence file editing Mapping | https://usegalaxy.eu | ||||
| 2024-03-08 | 2024-03-13 | MIT | Pairwise sequence alignment Structure visualisation Genome annotation Genome visualisation Data handling Pathway visualisation Sequence file editing Mapping | https://usegalaxy.eu | ||||
| 2024-06-08 | 2024-06-17 | MIT | Data handling Sequence alignment analysis | https://usegalaxy.eu | ||||
| 2024-04-19 | 2024-04-23 | MIT | Pairwise sequence alignment Structure visualisation Genome annotation Genome visualisation Data handling Pathway visualisation Sequence file editing Mapping | https://usegalaxy.eu | ||||
| 2024-04-01 | 2024-04-19 | MIT | Pairwise sequence alignment Structure visualisation Genome annotation Genome visualisation Data handling Pathway visualisation Sequence file editing Mapping | https://usegalaxy.eu | ||||
| 2024-04-24 | 2024-04-27 | MIT | Pairwise sequence alignment Structure visualisation Genome annotation Genome visualisation Data handling Pathway visualisation Sequence file editing Mapping | https://usegalaxy.eu | ||||
| 2024-04-30 | 2024-05-02 | MIT | Pairwise sequence alignment Structure visualisation Genome annotation Genome visualisation Data handling Pathway visualisation Sequence file editing Mapping | https://usegalaxy.eu | ||||
| 2024-08-28 | 2024-10-04 | MIT | Structure visualisation Genome visualisation Pathway visualisation | https://usegalaxy.eu | ||||
| 2024-10-02 | 2024-10-09 | MIT | Structure visualisation Genome visualisation Pathway visualisation | https://usegalaxy.org | ||||
| 2024-08-28 | 2024-10-02 | MIT | Pairwise sequence alignment Sequence analysis Genome annotation Data handling Mapping Structural variation detection Sequence file editing | https://usegalaxy.eu | ||||
| 2024-06-08 | 2024-06-14 | MIT | Pairwise sequence alignment Structure visualisation Genome annotation Genome visualisation Data handling Pathway visualisation Sequence file editing Mapping | https://usegalaxy.eu | ||||
| 2024-08-30 | 2024-10-04 | https://usegalaxy.eu | ||||||
| 2024-05-02 | 2024-08-28 | MIT | Pairwise sequence alignment Structure visualisation Genome annotation Genome visualisation Data handling Pathway visualisation Sequence file editing Mapping | https://usegalaxy.eu | ||||
| 2024-07-02 | 2024-08-28 | MIT | Pairwise sequence alignment Structure visualisation Genome annotation Genome visualisation Data handling Pathway visualisation Sequence file editing Mapping | https://usegalaxy.eu | ||||
| 2024-04-19 | 2024-05-01 | https://usegalaxy.eu | ||||||
| 2019-08-06 | 2019-08-07 | Read summarisation Sequence alignment RNA-Seq quantification | https://usegalaxy.org | |||||
| 2010-12-07 | 2014-03-19 | rna seq sam paired unique | https://usegalaxy.org | |||||
| 2021-11-08 | 2023-01-30 | Apache-2.0 | Sequence assembly | Sequence contamination filtering Sequencing quality control | Large-genome-assembly | WorkflowHub | ||
| 2021-09-15 | 2021-11-09 | Sequence contamination filtering Sequencing quality control | LG-WF | https://usegalaxy.org.au | ||||
| 2015-02-28 | 2015-02-28 | https://usegalaxy.org | ||||||
| 2023-08-12 | 2023-09-02 | Sequence trimming Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org | |||||
| 2018-09-03 | 2018-09-03 | Statistical calculation Genome visualisation Genome assembly Sequence composition calculation Coding region prediction Genome annotation Antimicrobial resistance prediction Gene prediction Sequencing quality control Multilocus sequence typing | https://usegalaxy.org.au | |||||
| 2018-11-05 | 2018-11-05 | Validation Statistical calculation Sequence composition calculation Sequencing quality control | https://usegalaxy.org | |||||
| 2016-05-05 | 2016-05-26 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org | |||||
| 2023-03-01 | 2023-09-05 | CC-BY-4.0 | Sequence analysis Genetic variation analysis | variant-analysis | WorkflowHub | |||
| 2023-02-20 | 2023-02-25 | variant-analysis | https://usegalaxy.eu | |||||
| 2022-04-19 | 2023-07-11 | MIT | Sequence analysis Genetic variation analysis | variant-analysis | https://usegalaxy.eu | |||
| 2021-05-30 | 2021-05-30 | Statistical calculation Formatting Data handling Sequence alignment analysis Genome indexing Sequence composition calculation Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2020-10-24 | 2020-10-30 | moleculardynamics | https://usegalaxy.eu | |||||
| 2024-06-21 | 2024-06-21 | GPL-3.0+ | Data handling Genome assembly Mapping Scaffolding Visualisation Transcriptome assembly Sequence alignment Sequence assembly validation | TSI | WorkflowHub | |||
| 2019-05-07 | 2020-08-25 | Statistical calculation Genome indexing Sequence composition calculation Read mapping Primer removal Variant calling Sequence trimming Generation Read pre-processing Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2012-12-26 | 2015-01-26 | https://usegalaxy.org | ||||||
| 2022-01-16 | 2022-01-16 | Statistical calculation Data handling Sequence composition calculation Primer removal Validation Sequence trimming Read pre-processing Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2021-03-19 | 2021-03-19 | galaxy-interface galaxy-training-network | https://usegalaxy.org.au | |||||
| 2017-06-10 | 2017-06-28 | https://usegalaxy.org | ||||||
| 2023-06-27 | 2024-03-19 | Pairwise sequence alignment Visualisation Taxonomic classification Box-Whisker plot plotting Scatter plot plotting | https://usegalaxy.eu | |||||
| 2024-04-05 | 2024-04-05 | Pairwise sequence alignment Visualisation Taxonomic classification Box-Whisker plot plotting Scatter plot plotting | https://usegalaxy.org | |||||
| 2020-05-24 | 2020-05-24 | Sequence composition calculation Statistical calculation Sequencing quality control | transcriptomics | https://usegalaxy.eu | ||||
| 2020-06-18 | 2023-02-13 | Apache-2.0 | Sequence database search Formatting Sequence profile generation Statistical calculation de Novo sequencing Format validation De-novo assembly Read mapping Aggregation Coding region prediction Differential gene expression analysis Sequence clustering Generation Data retrieval Sequencing quality control Data handling Genome assembly Genome indexing Database search Validation Sequence contamination filtering Gene prediction Conversion Probabilistic sequence generation Sequence generation Multiple sequence alignment Sequence alignment | Alignment Annotation Assembly RNASEQ Unicycler covid-19 | WorkflowHub | |||
| 2023-12-14 | 2023-12-14 | Statistical calculation Genome assembly Sequence composition calculation Aggregation Coding region prediction Validation Genome annotation Visualisation Gene prediction Sequence assembly validation Sequencing quality control | assembly name:microGalaxy | https://usegalaxy.eu | ||||
| 2020-04-07 | 2020-04-07 | Statistical calculation Genome assembly Sequence composition calculation Aggregation Coding region prediction Validation Genome annotation Visualisation Gene prediction Sequence assembly validation Sequencing quality control | assembly galaxy-training-network | https://usegalaxy.org.au | ||||
| 2014-02-08 | 2014-03-05 | Sequence composition calculation Statistical calculation Sequencing quality control | variant-calling | https://usegalaxy.org | ||||
| 2018-07-31 | 2018-07-31 | Sequence alignment | https://usegalaxy.org | |||||
| 2024-07-08 | 2024-07-08 | Differential gene expression analysis | https://usegalaxy.eu | |||||
| 2024-03-14 | 2024-03-14 | https://usegalaxy.eu | ||||||
| 2023-05-19 | 2023-05-19 | Sequence contamination filtering Statistical calculation Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2023-05-19 | 2023-05-19 | Sequence contamination filtering Statistical calculation Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2022-11-17 | 2022-11-17 | https://usegalaxy.eu | ||||||
| 2019-05-13 | 2019-05-13 | https://usegalaxy.eu | ||||||
| 2024-03-14 | 2024-03-14 | https://usegalaxy.org | ||||||
| 2019-03-20 | 2019-03-21 | Sequence read processing Phylogenetic analysis Visualisation Taxonomic classification Sequence clustering DNA barcoding Sequencing quality control | https://usegalaxy.org | |||||
| 2017-04-11 | 2017-09-01 | Sequence composition calculation Statistical calculation Sequence merging Sequencing quality control | https://usegalaxy.org | |||||
| 2016-04-09 | 2016-04-09 | https://usegalaxy.org | ||||||
| 2014-06-18 | 2014-06-19 | Sequence composition calculation Statistical calculation Read mapping Sequencing quality control | https://usegalaxy.org | |||||
| 2014-01-06 | 2014-06-15 | https://usegalaxy.org | ||||||
| 2014-04-30 | 2014-05-07 | https://usegalaxy.org | ||||||
| 2014-01-02 | 2014-01-16 | https://usegalaxy.org | ||||||
| 2018-12-21 | 2019-01-02 | Sequence trimming Data handling Read pre-processing Sequence alignment Primer removal | https://usegalaxy.org | |||||
| 2021-03-26 | 2022-05-04 | testtag mytag | https://usegalaxy.org | |||||
| 2019-02-01 | 2019-02-01 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Sequence annotation Differential gene expression analysis RNA-Seq analysis Transcriptome assembly Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2022-05-10 | 2022-05-11 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2018-03-02 | 2018-03-02 | Data handling Sequence annotation | https://usegalaxy.org | |||||
| 2013-12-17 | 2014-02-04 | Statistical calculation ID mapping Sequence composition calculation Database search Sequencing quality control | virus viroid illumina sRNAs | https://usegalaxy.org | ||||
| 2014-02-03 | 2014-02-03 | Statistical calculation ID mapping Sequence composition calculation Read mapping Database search Sequencing quality control | illumina virus sirnas viroid | https://usegalaxy.org | ||||
| 2013-06-27 | 2013-06-27 | https://usegalaxy.org | ||||||
| 2020-12-03 | 2021-12-21 | Formatting Statistical calculation Genome indexing Read mapping Variant calling Sequence contamination filtering Generation Read pre-processing Sequence alignment Sequencing quality control | https://usegalaxy.eu | |||||
| 2022-01-31 | 2022-03-07 | Formatting Statistical calculation Genome indexing Read mapping Variant calling Sequence contamination filtering Generation Read pre-processing Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2024-05-28 | 2024-05-28 | MIT | Formatting Genome indexing Read mapping Validation Sequence contamination filtering Generation Sequence alignment Sequencing quality control | mpxv generic cloud-costs | https://usegalaxy.eu | |||
| 2024-05-28 | 2024-05-28 | MIT | Formatting Genome indexing Read mapping Validation Sequence contamination filtering Generation Sequence alignment Sequencing quality control | mpxv generic cloud-costs | https://usegalaxy.org | |||
| 2024-05-28 | 2024-05-28 | MIT | Formatting Genome indexing Read mapping Validation Sequence contamination filtering Generation Sequence alignment Sequencing quality control | mpxv generic cloud-costs | https://usegalaxy.org.au | |||
| 2024-05-28 | 2024-05-28 | MIT | Formatting Genome indexing Read mapping Validation Sequence contamination filtering Generation Sequence alignment Sequencing quality control | mpxv generic cloud-costs | https://usegalaxy.org.au | |||
| 2016-04-27 | 2016-04-27 | Statistical calculation Formatting Genome indexing Sequence composition calculation Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2024-04-30 | 2024-05-14 | Statistical calculation Data handling Sequence composition calculation Read mapping Sequencing quality control | https://usegalaxy.org | |||||
| 2023-10-27 | 2023-10-27 | GPL-3.0 | Biomedical science Genetic variation Oncology | Statistical calculation Genome indexing Sequence composition calculation Read mapping Validation Variant calling Generation Sequence alignment Sequencing quality control | EOSC4Cancer | WorkflowHub | ||
| 2023-10-26 | 2023-10-27 | GPL-3.0-or-later | Statistical calculation Genome indexing Sequence composition calculation Read mapping Validation Variant calling Generation Sequence alignment Sequencing quality control | EOSC4Cancer | https://usegalaxy.eu | |||
| 2016-06-04 | 2022-01-19 | Statistical calculation Genome indexing Sequence composition calculation Read mapping Variant calling Generation Sequence alignment Sequencing quality control | Assingment | https://usegalaxy.org | ||||
| 2021-08-16 | 2021-08-16 | Variant calling Statistical calculation Data handling Sequence composition calculation Read mapping Sequencing quality control | https://usegalaxy.org | |||||
| 2012-10-13 | 2012-10-15 | https://usegalaxy.org | ||||||
| 2021-03-18 | 2021-03-18 | Formatting Statistical calculation Genome indexing Read mapping Primer removal Variant calling Sequence trimming Generation Read pre-processing Sequence alignment | RNAseq Trimming BWA-MEM SortSAM MarkDuplicates BamCoverage FreeBayes VCFfilter Bcftools | https://usegalaxy.org | ||||
| 2014-08-13 | 2014-09-25 | Variant calling Statistical calculation | https://usegalaxy.eu | |||||
| 2014-09-24 | 2014-09-24 | Variant calling Statistical calculation | VariantCalling SNP GWAS | https://usegalaxy.eu | ||||
| 2018-02-17 | 2018-02-20 | Statistical calculation Formatting Genome indexing Sequence composition calculation Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2020-12-15 | 2021-01-02 | Read mapping | https://usegalaxy.eu | |||||
| 2022-12-22 | 2022-12-22 | Sequence trimming Read pre-processing Genome indexing Generation Read mapping Sequence alignment Primer removal | https://usegalaxy.org | |||||
| 2014-03-03 | 2014-08-11 | Formatting Read mapping | https://usegalaxy.eu | |||||
| 2014-03-31 | 2014-06-03 | https://usegalaxy.org | ||||||
| 2024-01-29 | 2024-01-29 | MIT | name:single-cell | https://usegalaxy.eu | ||||
| 2024-01-29 | 2024-01-29 | MIT | name:single-cell | https://usegalaxy.org | ||||
| 2024-09-19 | 2024-09-19 | MIT | name:single-cell | https://usegalaxy.org.au | ||||
| 2024-03-14 | 2024-03-14 | MIT | name:single-cell | https://usegalaxy.eu | ||||
| 2024-03-14 | 2024-03-14 | MIT | name:single-cell | https://usegalaxy.org | ||||
| 2024-09-19 | 2024-09-19 | MIT | name:single-cell | https://usegalaxy.org.au | ||||
| 2024-01-29 | 2024-01-29 | MIT | name:single-cell | https://usegalaxy.eu | ||||
| 2024-01-29 | 2024-01-29 | MIT | name:single-cell | https://usegalaxy.org | ||||
| 2024-09-19 | 2024-09-19 | MIT | name:single-cell | https://usegalaxy.org.au | ||||
| 2024-03-14 | 2024-03-14 | MIT | name:single-cell | https://usegalaxy.eu | ||||
| 2024-03-14 | 2024-03-14 | MIT | name:single-cell | https://usegalaxy.org | ||||
| 2024-09-19 | 2024-09-19 | MIT | name:single-cell | https://usegalaxy.org.au | ||||
| 2024-03-14 | 2024-04-20 | MIT | name:single-cell | WorkflowHub | ||||
| 2022-08-04 | 2022-08-04 | De-novo assembly Read mapping Primer removal Pairwise sequence alignment Sequence assembly validation Phasing k-mer counting Genome assembly Genome indexing Mapping Scaffolding Read binning Sequence trimming Visualisation Transcriptome assembly Generation Read pre-processing Sequence alignment | assembly | https://usegalaxy.org.au | ||||
| 2023-01-15 | 2023-02-07 | CC-BY-4.0 | Data handling | PAG2023 | https://usegalaxy.eu | |||
| 2022-11-09 | 2022-11-10 | CC-BY-4.0 | Data handling | vgp assembly bionano | https://usegalaxy.org.au | |||
| 2021-09-01 | 2021-09-01 | CC-BY-4.0 | Visualisation Sequence assembly validation | https://usegalaxy.eu | ||||
| 2022-04-05 | 2023-01-16 | Apache-2.0 | Assembly Galaxy vgp | WorkflowHub | ||||
| 2022-11-09 | 2022-11-10 | CC-BY-4.0 | Data handling Genome assembly De-novo assembly Mapping Scaffolding Transcriptome assembly Sequence alignment Sequence assembly validation | vgp assembly hi-c salsa | https://usegalaxy.org.au | |||
| 2023-01-12 | 2023-01-17 | CC-BY-4.0 | Transcriptome assembly Data handling Genome assembly Sequence assembly validation Mapping Sequence alignment Scaffolding | PAG2023 | https://usegalaxy.eu | |||
| 2022-11-09 | 2022-11-10 | CC-BY-4.0 | Transcriptome assembly Data handling Genome assembly Sequence assembly validation Mapping Sequence alignment Scaffolding | vgp assembly hi-c yahs | https://usegalaxy.org.au | |||
| 2022-04-06 | 2023-01-16 | GPL-3.0 | Assembly Galaxy vgp | WorkflowHub | ||||
| 2022-04-05 | 2023-01-16 | GPL-3.0 | Assembly Galaxy vgp | WorkflowHub | ||||
| 2024-01-31 | 2024-01-31 | CC-BY-4.0 | Phasing k-mer counting Genome assembly De-novo assembly Primer removal Scaffolding Sequence trimming Visualisation Transcriptome assembly Read pre-processing Sequence assembly validation | VGP HiFi_assembly | https://usegalaxy.eu | |||
| 2022-04-05 | 2023-01-16 | GPL-3.0 | Assembly Galaxy vgp | WorkflowHub | ||||
| 2022-04-05 | 2023-01-16 | GPL-3.0 | Assembly Galaxy vgp | WorkflowHub | ||||
| 2022-01-23 | 2022-01-23 | Phasing k-mer counting Genome assembly De-novo assembly Scaffolding Read binning Pairwise sequence alignment Visualisation Sequence assembly validation | https://usegalaxy.eu | |||||
| 2022-01-23 | 2022-01-23 | Phasing k-mer counting Genome assembly De-novo assembly Scaffolding Read binning | https://usegalaxy.eu | |||||
| 2022-04-05 | 2023-01-16 | GPL-3.0 | Assembly Galaxy vgp | WorkflowHub | ||||
| 2022-06-14 | 2024-06-20 | CC-BY-4.0 | WorkflowHub | |||||
| 2022-06-14 | 2024-06-20 | CC-BY-4.0 | WorkflowHub | |||||
| 2019-01-29 | 2019-02-01 | https://usegalaxy.eu | ||||||
| 2020-03-31 | 2020-07-10 | Multiple sequence alignment Statistical calculation Phylogenetic tree generation | https://usegalaxy.org | |||||
| 2019-06-22 | 2019-06-22 | Variant calling Formatting Statistical calculation Genome indexing Generation Read mapping Sequence alignment | https://usegalaxy.org | |||||
| 2024-08-21 | 2024-09-26 | Visualisation Sequence clustering Sequence cluster visualisation Sequence annotation | virology otu virannot RPS virus | https://usegalaxy.eu | ||||
| 2021-03-19 | 2021-03-19 | computational-chemistry galaxy-training-network | https://usegalaxy.org.au | |||||
| 2019-04-01 | 2019-04-03 | Sequence trimming Read pre-processing Genome indexing Generation Read mapping Sequence alignment Primer removal | https://usegalaxy.org | |||||
| 2024-02-27 | 2024-03-13 | Statistical calculation Taxonomic classification Data handling Genome assembly Sequence alignment analysis Sequence composition calculation Read mapping Sequencing quality control | https://usegalaxy.org | |||||
| 2020-04-17 | 2020-08-31 | Sequence visualisation | visualisation galaxy-training-network | https://usegalaxy.org.au | ||||
| 2020-05-19 | 2020-05-19 | Formatting | https://usegalaxy.org.au | |||||
| 2018-11-26 | 2018-11-26 | Formatting | https://usegalaxy.org.au | |||||
| 2019-01-17 | 2019-01-25 | RNA RNA-seq visualization | https://usegalaxy.eu | |||||
| 2019-01-17 | 2019-01-17 | RNA RNA-seq visualization | https://usegalaxy.eu | |||||
| 2021-03-19 | 2021-03-19 | transcriptomics galaxy-training-network | https://usegalaxy.org.au | |||||
| 2024-02-15 | 2024-02-15 | CC-BY-4.0 | Ecology | WorkflowHub | ||||
| 2024-08-27 | 2024-08-28 | Genome visualisation | https://usegalaxy.eu | |||||
| 2019-03-04 | 2019-03-04 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2024-03-25 | 2024-03-25 | Validation Sequence contamination filtering Sequencing quality control | VeryShortIntro | https://usegalaxy.org | ||||
| 2023-06-28 | 2023-10-16 | GPL-3.0 | Bioinformatics | Data handling Genome indexing Read mapping Sequence contamination filtering Generation Sequence file editing Sequence alignment Sequencing quality control | Alignment Annotation Bioinformatics Galaxy SNPs Virus covid-19 paired-end variant calling variant_calling workflow | WorkflowHub | ||
| 2023-06-27 | 2023-10-16 | GPL-3.0 | Data handling Genome indexing Read mapping Sequence contamination filtering Generation Sequence file editing Sequence alignment Sequencing quality control | Annotation Bioinformatics Galaxy SNPs Virus high-throughput_sequencing_analysis single-end variant variant calling variant_calling | WorkflowHub | |||
| 2023-05-15 | 2023-05-15 | https://usegalaxy.eu | ||||||
| 2023-11-14 | 2023-11-15 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.fr | |||||
| 2022-09-26 | 2022-09-29 | https://usegalaxy.org | ||||||
| 2024-09-02 | 2024-09-02 | Phasing k-mer counting Genome assembly De-novo assembly Scaffolding Visualisation Transcriptome assembly Sequence assembly validation | https://usegalaxy.org.au | |||||
| 2024-06-05 | 2024-10-17 | Genome visualisation Genome assembly Sequence annotation Scaffolding Sequence analysis Transcriptome assembly Genome annotation RNA-Seq analysis Differential protein expression profiling Gene prediction Editing Sequence assembly validation | Genomeannotation Helixer Visualization Red | https://usegalaxy.eu | ||||
| 2017-11-09 | 2017-11-09 | https://usegalaxy.org | ||||||
| 2021-10-26 | 2023-03-22 | Peak detection Mass spectrum visualisation Chromatogram visualisation Validation Chromatographic alignment Filtering Label-free quantification | LC-MS QTOF ESI+ W4M | https://usegalaxy.fr | ||||
| 2023-05-10 | 2023-05-10 | https://usegalaxy.org | ||||||
| 2021-03-17 | 2021-03-17 | Statistical calculation Sequence composition calculation Read mapping Nucleic acid sequence analysis Sequencing quality control | https://usegalaxy.eu | |||||
| 2010-12-20 | 2011-11-27 | ID mapping Phylogenetic tree visualisation Database search | https://usegalaxy.org | |||||
| 2023-01-05 | 2023-01-05 | Sequence contamination filtering Visualisation Taxonomic classification Sequencing quality control | https://usegalaxy.eu | |||||
| 2023-09-07 | 2023-10-03 | Target-Decoy de Novo sequencing Tag-based peptide identification Expression analysis Protein identification | https://usegalaxy.eu | |||||
| 2023-12-14 | 2023-12-14 | Target-Decoy de Novo sequencing Tag-based peptide identification Expression analysis Protein identification | name:clinicalMP name:microGalaxy | https://usegalaxy.eu | ||||
| 2023-12-14 | 2023-12-14 | Statistical calculation Formatting Heat map generation Filtering Standardisation and normalisation Protein quantification Visualisation Imputation Clustering Principal component plotting | name:microGalaxy name:clinicalMP | https://usegalaxy.eu | ||||
| 2023-09-20 | 2023-10-03 | Statistical calculation Formatting Heat map generation Filtering Standardisation and normalisation Protein quantification Visualisation Imputation Clustering Principal component plotting | https://usegalaxy.eu | |||||
| 2023-10-18 | 2023-10-25 | https://usegalaxy.eu | ||||||
| 2023-12-14 | 2023-12-14 | name:microGalaxy name:clinicalMP | https://usegalaxy.eu | |||||
| 2023-12-14 | 2023-12-14 | Statistical calculation Heat map generation Standardisation and normalisation Protein quantification Visualisation Imputation Clustering Principal component plotting | name:clinicalMP name:microGalaxy | https://usegalaxy.eu | ||||
| 2023-10-19 | 2023-10-19 | Statistical calculation Heat map generation Standardisation and normalisation Protein quantification Visualisation Imputation Clustering Principal component plotting | https://usegalaxy.eu | |||||
| 2023-10-03 | 2023-10-19 | Visualisation Prediction and recognition | https://usegalaxy.eu | |||||
| 2023-12-14 | 2023-12-14 | Visualisation Prediction and recognition | name:microGalaxy name:clinicalMP | https://usegalaxy.eu | ||||
| 2023-10-20 | 2023-10-20 | Statistical calculation Sequence trimming Data handling Sequence alignment analysis Sequence composition calculation Sequence alignment Sequencing quality control | https://usegalaxy.fr | |||||
| 2023-04-08 | 2023-09-03 | Taxonomic classification Genome assembly Read mapping Coding region prediction Scaffolding Sequence contamination filtering Analysis Visualisation Gene prediction Genome annotation Transcriptome assembly Read alignment Sequence assembly Sequence assembly validation Sequencing quality control | https://usegalaxy.eu | |||||
| 2023-12-14 | 2023-12-14 | Visualisation | metagenomics name:microGalaxy | https://usegalaxy.eu | ||||
| 2024-08-27 | 2024-10-07 | MIT | Validation Sequence contamination filtering Formatting Genome indexing Generation Read mapping Sequence alignment Sequencing quality control | generic VeuPath Haploid | https://usegalaxy.org | |||
| 2024-01-25 | 2024-01-25 | Statistical calculation Formatting Data handling Genome indexing Sequence composition calculation Read mapping Validation Sequence contamination filtering Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2019-03-07 | 2019-03-08 | Formatting Genome indexing Generation Read mapping Sequence alignment | https://usegalaxy.org | |||||
| 2022-08-13 | 2022-08-18 | Visualisation | https://usegalaxy.eu | |||||
| 2013-02-22 | 2013-02-22 | https://usegalaxy.eu | ||||||
| 2013-02-21 | 2015-06-01 | https://usegalaxy.eu | ||||||
| 2013-02-07 | 2013-02-21 | https://usegalaxy.eu | ||||||
| 2022-08-10 | 2022-08-10 | Mapping | https://usegalaxy.eu | |||||
| 2024-01-25 | 2024-01-25 | Statistical calculation Formatting Data handling Genome indexing Sequence composition calculation Read mapping Validation Sequence contamination filtering Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2022-09-27 | 2022-09-29 | Differential gene expression analysis RNA-Seq analysis RNA-Seq quantification Gene expression analysis Sequence composition calculation | https://usegalaxy.org.au | |||||
| 2024-06-06 | 2024-06-08 | MIT | Structure visualisation Genome visualisation Pathway visualisation Data handling Sequence alignment analysis | https://usegalaxy.eu | ||||
| 2021-03-01 | 2021-03-02 | Parsing Image analysis Quantification | Cellprofiler | https://usegalaxy.eu | ||||
| 2024-01-13 | 2024-01-13 | Validation Variant calling Statistical calculation Sequence composition calculation Read mapping Sequencing quality control | https://usegalaxy.org | |||||
| 2017-11-15 | 2017-11-15 | https://usegalaxy.org | ||||||
| 2023-05-18 | 2023-05-18 | Sequence contamination filtering Statistical calculation Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2023-05-02 | 2023-05-03 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2018-02-16 | 2018-02-16 | Variant calling Statistical calculation Formatting Sequence composition calculation Read mapping Sequencing quality control | https://usegalaxy.org | |||||
| 2013-07-30 | 2013-07-30 | https://usegalaxy.org | ||||||
| 2023-10-19 | 2023-10-19 | Phylogenetic tree generation (maximum likelihood and Bayesian methods) Multiple sequence alignment Phylogenetic tree generation (from molecular sequences) | https://usegalaxy.org | |||||
| 2023-01-01 | 2023-01-01 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2017-11-09 | 2017-11-09 | https://usegalaxy.org | ||||||
| 2017-05-31 | 2017-05-31 | Statistical calculation Data handling RNA-Seq quantification Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.org | |||||
| 2021-01-24 | 2021-01-24 | Validation Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2024-01-27 | 2024-01-27 | Mapping | https://usegalaxy.eu | |||||
| 2024-01-24 | 2024-01-27 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.eu | |||||
| 2024-01-26 | 2024-01-27 | RNA-Seq analysis Gene-set enrichment analysis | https://usegalaxy.eu | |||||
| 2020-05-28 | 2020-05-28 | Statistical calculation Formatting Data handling Sequence alignment analysis Genome indexing Sequence composition calculation Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2011-07-20 | 2011-11-01 | https://usegalaxy.org | ||||||
| 2024-02-17 | 2024-02-17 | Sequence composition calculation Statistical calculation Sequencing quality control | 1 | https://usegalaxy.eu | ||||
| 2024-01-09 | 2024-01-09 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2024-04-11 | 2024-04-11 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2022-01-31 | 2023-03-13 | https://usegalaxy.eu | ||||||
| 2022-01-26 | 2022-01-26 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2021-01-24 | 2021-01-24 | https://usegalaxy.eu | ||||||
| 2022-11-29 | 2022-11-29 | Mapping | https://usegalaxy.eu | |||||
| 2022-05-09 | 2022-05-18 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.eu | |||||
| 2023-01-01 | 2023-01-01 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2023-01-01 | 2023-01-01 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2020-12-07 | 2020-12-07 | https://usegalaxy.eu | ||||||
| 2022-03-14 | 2022-03-14 | https://usegalaxy.org | ||||||
| 2021-01-24 | 2021-01-24 | RNA-Seq analysis Annotation | https://usegalaxy.eu | |||||
| 2018-04-09 | 2018-04-09 | Statistical calculation Formatting Data handling Sequence alignment analysis Genome indexing Sequence composition calculation Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2024-01-26 | 2024-01-27 | Validation Statistical calculation Genome visualisation RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2020-01-15 | 2020-01-15 | https://usegalaxy.eu | ||||||
| 2023-05-05 | 2023-05-05 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2021-05-05 | 2021-05-06 | Statistical calculation Sequence trimming Sequence composition calculation Read pre-processing Primer removal Sequencing quality control | https://usegalaxy.org | |||||
| 2024-07-17 | 2024-08-30 | CC-BY-4.0 | Differential gene expression analysis | epigenetics scATAC-seq | WorkflowHub | |||
| 2017-11-30 | 2017-11-30 | https://usegalaxy.org | ||||||
| 2012-02-26 | 2013-03-07 | https://usegalaxy.org | ||||||
| 2023-01-30 | 2023-01-31 | Statistical calculation Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Sequencing quality control | https://usegalaxy.org | |||||
| 2023-10-31 | 2024-09-09 | CC-BY-4.0 | Antimicrobial resistance prediction | WorkflowHub | ||||
| 2023-11-09 | 2023-11-09 | CC-BY-4.0 | Sequence read processing Phylogenetic analysis Taxonomic classification Visualisation Sequence clustering DNA barcoding Sequencing quality control | Metagenomics | WorkflowHub | |||
| 2021-03-19 | 2021-03-19 | Statistical calculation Sequence alignment analysis Sequence composition calculation Sequence comparison Primer removal Validation Sequence trimming Read pre-processing Sequence similarity search Sequencing quality control | metagenomics galaxy-training-network | https://usegalaxy.org.au | ||||
| 2021-03-19 | 2021-03-19 | Sequence read processing Phylogenetic analysis Taxonomic classification Visualisation Sequence clustering DNA barcoding Sequencing quality control | metagenomics galaxy-training-network | https://usegalaxy.org.au | ||||
| 2022-07-05 | 2022-07-09 | Sequence read processing Phylogenetic analysis Taxonomic classification Visualisation Sequence clustering DNA barcoding Sequencing quality control | metagenomics | https://usegalaxy.org | ||||
| 2015-04-23 | 2015-08-30 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org | |||||
| 2012-03-02 | 2013-04-02 | https://usegalaxy.org | ||||||
| 2013-04-02 | 2013-04-02 | https://usegalaxy.org | ||||||
| 2015-08-27 | 2015-08-30 | https://usegalaxy.org | ||||||
| 2023-11-09 | 2023-11-09 | CC-BY-4.0 | Sequence read processing Phylogenetic analysis Taxonomic classification Visualisation Sequence clustering DNA barcoding Sequencing quality control | Metagenomics | WorkflowHub | |||
| 2021-03-19 | 2021-03-19 | Sequence read processing Phylogenetic analysis Taxonomic classification Visualisation Sequence clustering DNA barcoding Sequencing quality control | metagenomics galaxy-training-network | https://usegalaxy.org.au | ||||
| 2023-11-07 | 2024-09-09 | CC-BY-4.0 | WorkflowHub | |||||
| 2022-11-24 | 2024-09-09 | GPL-3.0 | Parsing Data handling Genome assembly Genome indexing Genome alignment Read mapping Read binning Sequence contamination filtering Sequence trimming RNA-Seq analysis Antimicrobial resistance prediction Sequence alignment Multilocus sequence typing | Bioinformatics antimicrobial resistance | WorkflowHub | |||
| 2023-11-09 | 2023-11-09 | CC-BY-4.0 | Sequence read processing Phylogenetic analysis Taxonomic classification Visualisation Sequence clustering DNA barcoding Sequencing quality control | Metagenomics | WorkflowHub | |||
| 2021-03-19 | 2021-03-19 | Sequence read processing Phylogenetic analysis Taxonomic classification Visualisation Sequence clustering DNA barcoding Sequencing quality control | metagenomics galaxy-training-network | https://usegalaxy.org.au | ||||
| 2020-07-13 | 2020-07-14 | metagenomics | https://usegalaxy.eu | |||||
| 2015-06-20 | 2015-06-20 | Statistical calculation Generation Genome indexing Sequence composition calculation Read mapping Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2021-03-19 | 2021-03-19 | Sequence read processing Phylogenetic analysis Taxonomic classification Visualisation Sequence clustering DNA barcoding Sequencing quality control | metagenomics galaxy-training-network | https://usegalaxy.org.au | ||||
| 2023-05-11 | 2024-09-09 | GPL-3.0 | Parsing Data handling Antimicrobial resistance prediction Genome assembly | 10.3390/microorganisms10020292 AMR AMR-detection Bioinformatics antimicrobial resistance | WorkflowHub | |||
| 2023-11-09 | 2023-11-09 | CC-BY-4.0 | Sequence read processing Phylogenetic analysis Taxonomic classification Visualisation Sequence clustering DNA barcoding Sequencing quality control | Metagenomics | WorkflowHub | |||
| 2021-03-19 | 2021-03-19 | Sequence read processing Phylogenetic analysis Taxonomic classification Visualisation Sequence clustering DNA barcoding Sequencing quality control | metagenomics galaxy-training-network | https://usegalaxy.org.au | ||||
| 2023-11-09 | 2023-11-09 | CC-BY-4.0 | Sequence read processing Phylogenetic analysis Taxonomic classification Visualisation Sequence clustering DNA barcoding Sequencing quality control | Metagenomics | WorkflowHub | |||
| 2021-03-19 | 2021-03-19 | Sequence read processing Phylogenetic analysis Taxonomic classification Visualisation Sequence clustering DNA barcoding Sequencing quality control | metagenomics galaxy-training-network | https://usegalaxy.org.au | ||||
| 2023-11-09 | 2023-11-09 | CC-BY-4.0 | Sequence read processing Phylogenetic analysis Taxonomic classification Phylogenetic tree generation Visualisation Sequence clustering Phylogenetic tree analysis DNA barcoding Phylogenetic tree reconstruction Sequencing quality control | Metagenomics | WorkflowHub | |||
| 2021-03-03 | 2021-03-03 | Taxref Alosa Abramis | https://usegalaxy.eu | |||||
| 2018-11-13 | 2018-11-13 | https://usegalaxy.org | ||||||
| 2022-03-28 | 2022-03-28 | Statistical calculation Sequence composition calculation Validation Differential gene expression analysis RNA-Seq analysis Visualisation Transcriptome assembly Sequence alignment Sequencing quality control | https://usegalaxy.eu | |||||
| 2019-03-16 | 2019-03-16 | Validation Differential gene expression analysis RNA-Seq analysis Transcriptome assembly RNA-Seq quantification Sequence alignment Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2022-12-21 | 2022-12-21 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.eu | |||||
| 2024-04-08 | 2024-04-08 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2024-01-10 | 2024-01-10 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2011-02-24 | 2011-10-19 | https://usegalaxy.org | ||||||
| 2015-01-20 | 2015-01-20 | https://usegalaxy.org | ||||||
| 2022-02-07 | 2022-02-07 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.eu | |||||
| 2024-08-16 | 2024-08-17 | Multiple sequence alignment Phylogenetic analysis Sequence analysis Formatting | https://usegalaxy.eu | |||||
| 2024-08-17 | 2024-08-17 | Multiple sequence alignment | https://usegalaxy.eu | |||||
| 2022-03-14 | 2022-03-14 | https://usegalaxy.org | ||||||
| 2017-02-10 | 2017-02-10 | https://usegalaxy.org | ||||||
| 2023-09-26 | 2023-09-26 | Sequence contamination filtering Statistical calculation Formatting Data handling Sequence composition calculation Sequencing quality control | https://usegalaxy.org | |||||
| 2022-05-22 | 2022-05-22 | Statistical calculation Formatting De-novo assembly Sequence composition calculation Validation Visualisation Sequence assembly validation Sequencing quality control | https://usegalaxy.org | |||||
| 2021-01-05 | 2021-01-05 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2022-02-25 | 2022-02-28 | Differential gene expression analysis RNA-Seq analysis Annotation | https://usegalaxy.eu | |||||
| 2023-01-03 | 2023-01-03 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2024-04-05 | 2024-04-09 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2022-07-03 | 2022-07-03 | Sequence read processing Phylogenetic analysis Taxonomic classification Phylogenetic tree generation Visualisation Sequence clustering Phylogenetic tree analysis DNA barcoding Phylogenetic tree reconstruction Sequencing quality control | https://usegalaxy.org | |||||
| 2021-01-24 | 2021-01-24 | https://usegalaxy.eu | ||||||
| 2023-10-31 | 2023-10-31 | Mapping | https://usegalaxy.org | |||||
| 2023-10-31 | 2023-10-31 | Mapping | https://usegalaxy.org | |||||
| 2022-12-05 | 2022-12-05 | RNA-Seq analysis | https://usegalaxy.eu | |||||
| 2022-03-18 | 2022-03-18 | Mapping | https://usegalaxy.org | |||||
| 2024-08-23 | 2024-08-23 | Differential gene expression analysis | https://usegalaxy.eu | |||||
| 2018-08-02 | 2018-08-02 | Statistical calculation Genome assembly Sequence composition calculation Aggregation Sequencing quality control | https://usegalaxy.org | |||||
| 2022-05-11 | 2022-05-12 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2022-05-11 | 2022-05-12 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2019-04-03 | 2019-04-04 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2024-04-11 | 2024-04-11 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2024-04-14 | 2024-04-14 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Validation Differential gene expression analysis RNA-Seq analysis Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2024-01-08 | 2024-01-09 | Variant calling Statistical calculation Formatting Sequence composition calculation Mapping Read mapping Sequencing quality control | https://usegalaxy.org | |||||
| 2017-03-29 | 2017-03-29 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2018-06-27 | 2018-06-29 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2024-01-10 | 2024-01-10 | Variant calling Statistical calculation Formatting Sequence composition calculation Mapping Read mapping Sequencing quality control | https://usegalaxy.org | |||||
| 2024-01-10 | 2024-01-10 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2024-01-08 | 2024-01-08 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2021-11-16 | 2021-11-16 | Statistical calculation Sequence composition calculation Read mapping Nucleic acid sequence analysis Sequencing quality control | https://usegalaxy.eu | |||||
| 2022-10-18 | 2022-10-18 | https://usegalaxy.eu | ||||||
| 2023-05-02 | 2023-05-02 | Differential gene expression analysis RNA-Seq analysis Read summarisation RNA-Seq quantification | https://usegalaxy.org.au | |||||
| 2024-06-25 | 2024-06-25 | Statistical calculation Sequence analysis Sequence composition calculation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2021-05-18 | 2021-05-18 | Differential gene expression analysis RNA-Seq analysis | https://usegalaxy.eu | |||||
| 2021-01-24 | 2021-01-24 | Validation Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2017-04-07 | 2017-04-07 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org | |||||
| 2022-05-21 | 2022-05-21 | Statistical calculation Formatting De-novo assembly Sequence composition calculation Validation Visualisation Sequence assembly validation Sequencing quality control | https://usegalaxy.org | |||||
| 2024-10-17 | 2024-10-17 | Validation Statistical calculation Visualisation Sequence composition calculation Sequencing quality control | https://usegalaxy.eu | |||||
| 2019-04-11 | 2019-04-11 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2024-01-10 | 2024-01-10 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2017-04-03 | 2017-04-03 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2024-01-09 | 2024-01-09 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2024-01-09 | 2024-01-09 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2024-01-09 | 2024-01-09 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2019-01-03 | 2019-01-03 | Variant calling Statistical calculation Formatting Sequence composition calculation Mapping Sequencing quality control | https://usegalaxy.org | |||||
| 2018-04-08 | 2018-04-09 | https://usegalaxy.org | ||||||
| 2016-06-05 | 2016-06-05 | Statistical calculation Formatting Genome indexing Sequence composition calculation Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2024-01-10 | 2024-01-10 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2024-01-09 | 2024-01-09 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2024-01-10 | 2024-01-10 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2024-01-09 | 2024-01-09 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2024-01-10 | 2024-01-10 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2024-01-09 | 2024-01-09 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2023-12-28 | 2024-01-08 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2023-02-11 | 2023-02-15 | Variant calling Sequence trimming DNA barcoding Read pre-processing Primer removal | https://usegalaxy.fr | |||||
| 2015-03-26 | 2015-03-26 | https://usegalaxy.org | ||||||
| 2021-03-16 | 2021-03-16 | Statistical calculation Sequence trimming Read pre-processing Sequence composition calculation Read mapping Primer removal Sequencing quality control | https://usegalaxy.org | |||||
| 2022-08-21 | 2022-08-21 | Visualisation | https://usegalaxy.eu | |||||
| 2022-08-21 | 2022-08-21 | https://usegalaxy.eu | ||||||
| 2022-08-21 | 2022-08-21 | Mapping | https://usegalaxy.org | |||||
| 2023-12-10 | 2023-12-14 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.eu | |||||
| 2022-12-21 | 2023-01-16 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.eu | |||||
| 2023-11-10 | 2023-11-10 | Sequence contamination filtering Statistical calculation Visualisation Taxonomic classification Sequence composition calculation Aggregation Sequencing quality control | https://usegalaxy.org | |||||
| 2018-05-08 | 2018-05-08 | Statistical calculation Formatting Data handling Sequence alignment analysis Genome indexing Sequence composition calculation Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2023-05-03 | 2023-05-04 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2020-05-11 | 2020-05-13 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2023-05-02 | 2023-05-02 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2022-05-18 | 2022-05-18 | Statistical calculation RNA-Seq quantification Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming Read summarisation RNA-Seq analysis Read pre-processing Sequence alignment Sequencing quality control | https://usegalaxy.org.au | |||||
| 2024-03-27 | 2024-03-27 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2021-05-06 | 2021-05-06 | Statistical calculation Sequence trimming Sequence composition calculation Read pre-processing Primer removal Sequencing quality control | https://usegalaxy.org | |||||
| 2023-05-02 | 2023-05-02 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2022-01-26 | 2022-01-26 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2017-03-05 | 2017-03-08 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2021-01-05 | 2021-01-06 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2019-04-03 | 2019-04-03 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2023-12-27 | 2024-01-08 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2024-05-03 | 2024-05-03 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2022-12-21 | 2022-12-21 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.eu | |||||
| 2019-03-22 | 2019-03-22 | Statistical calculation Formatting Data handling Sequence alignment analysis Sequence composition calculation Read mapping Variant calling Sequencing quality control | https://usegalaxy.org | |||||
| 2019-02-15 | 2019-02-15 | Read mapping | https://usegalaxy.org | |||||
| 2015-07-17 | 2015-07-17 | https://usegalaxy.eu | ||||||
| 2022-02-04 | 2022-02-04 | Validation Statistical calculation Sequence composition calculation Sequencing quality control | https://usegalaxy.eu | |||||
| 2020-04-30 | 2020-04-30 | Visualisation | https://usegalaxy.eu | |||||
| 2011-11-24 | 2011-11-24 | https://usegalaxy.org | ||||||
| 2021-06-10 | 2021-06-21 | Differential gene expression analysis | Single_Cell Scanpy | https://usegalaxy.org | ||||
| 2022-09-30 | 2022-11-21 | Statistical calculation Sequence trimming Sequence composition calculation Read pre-processing Primer removal Sequencing quality control | https://usegalaxy.eu | |||||
| 2024-01-13 | 2024-01-13 | Validation Statistical calculation Generation Genome indexing Sequence composition calculation Read mapping Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2018-11-08 | 2018-11-09 | Sequence read processing Phylogenetic analysis Taxonomic classification Visualisation Sequence clustering DNA barcoding Sequencing quality control | https://usegalaxy.org.au | |||||
| 2024-04-02 | 2024-04-02 | Validation Statistical calculation RNA-Seq analysis Transcriptome assembly Sequence composition calculation Sequence alignment Sequencing quality control | https://usegalaxy.fr | |||||
| 2023-05-18 | 2023-05-18 | https://usegalaxy.eu | ||||||
| 2023-05-18 | 2023-05-18 | https://usegalaxy.eu | ||||||
| 2023-05-18 | 2023-05-18 | https://usegalaxy.eu | ||||||
| 2024-04-14 | 2024-04-14 | Sequence database search Statistical calculation Fold recognition RNA-Seq quantification Information extraction Formatting Query and retrieval Differential gene expression analysis Genome annotation Read summarisation Sequencing quality control Data handling Sequence composition calculation Sequence annotation Homology-based gene prediction Validation RNA-Seq analysis Data retrieval Sequence alignment | https://usegalaxy.eu | |||||
| 2023-06-16 | 2023-06-20 | https://usegalaxy.org | ||||||
| 2021-12-03 | 2021-12-07 | Differential gene expression analysis Statistical calculation RNA-Seq analysis Transcriptome assembly Data handling Sequence composition calculation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2021-03-05 | 2021-03-07 | Statistical calculation Formatting Data handling Sequence alignment analysis Genome indexing Sequence composition calculation Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2024-04-29 | 2024-04-30 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2016-05-12 | 2016-05-12 | Statistical calculation Formatting Data handling Sequence alignment analysis Genome indexing Sequence composition calculation Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2017-04-09 | 2017-04-09 | Variant calling Statistical calculation | https://usegalaxy.org | |||||
| 2021-04-06 | 2021-04-06 | Statistical calculation Formatting Data handling Sequence alignment analysis Genome indexing Sequence composition calculation Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2016-06-08 | 2016-06-08 | Formatting Statistical calculation Data handling Sequence alignment analysis Genome indexing Read mapping Variant calling Generation Sequence alignment | https://usegalaxy.org | |||||
| 2016-06-04 | 2016-06-04 | Variant calling Statistical calculation Sequence composition calculation Read mapping Sequencing quality control | https://usegalaxy.org | |||||
| 2024-09-11 | 2024-09-25 | https://usegalaxy.eu | ||||||
| 2023-05-18 | 2023-05-18 | https://usegalaxy.eu | ||||||
| 2023-05-18 | 2023-05-18 | https://usegalaxy.eu | ||||||
| 2023-05-18 | 2023-05-18 | https://usegalaxy.eu | ||||||
| 2023-05-18 | 2023-05-18 | https://usegalaxy.eu | ||||||
| 2023-05-20 | 2023-05-20 | https://usegalaxy.eu | ||||||
| 2023-05-18 | 2023-05-18 | https://usegalaxy.eu | ||||||
| 2024-02-29 | 2024-02-29 | Peak detection Mass spectrum visualisation Chromatogram visualisation Validation Chromatographic alignment Filtering Label-free quantification | https://usegalaxy.fr | |||||
| 2024-04-08 | 2024-04-08 | Statistical calculation RNA-Seq quantification Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming Read summarisation RNA-Seq analysis Read pre-processing Sequence alignment Sequencing quality control | https://usegalaxy.org.au | |||||
| 2021-11-18 | 2021-11-22 | Statistical calculation Sequence composition calculation Read mapping Nucleic acid sequence analysis Sequencing quality control | https://usegalaxy.eu | |||||
| 2024-04-11 | 2024-04-11 | Differential gene expression analysis RNA-Seq analysis | https://usegalaxy.org.au | |||||
| 2023-11-03 | 2023-11-03 | Differential gene expression analysis RNA-Seq analysis | https://usegalaxy.org | |||||
| 2024-03-28 | 2024-03-28 | Differential gene expression analysis RNA-Seq analysis Read summarisation RNA-Seq quantification | https://usegalaxy.org.au | |||||
| 2020-05-29 | 2020-05-29 | Statistical calculation Formatting Data handling Sequence alignment analysis Genome indexing Sequence composition calculation Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2022-01-03 | 2022-01-03 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2024-01-24 | 2024-01-24 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.eu | |||||
| 2024-02-02 | 2024-02-02 | Gene-set enrichment analysis | https://usegalaxy.eu | |||||
| 2024-01-26 | 2024-02-02 | Gene functional annotation | https://usegalaxy.eu | |||||
| 2024-08-15 | 2024-08-15 | Phylogenetic tree visualisation Taxonomic classification Phylogenetic tree analysis Phylogenetic tree generation Phylogenetic tree editing Multiple sequence alignment Phylogenetic inference Phylogenetic tree reconstruction | https://usegalaxy.eu | |||||
| 2019-10-14 | 2019-10-14 | Genome visualisation | https://usegalaxy.eu | |||||
| 2021-01-24 | 2021-01-24 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.eu | |||||
| 2024-02-29 | 2024-02-29 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.eu | |||||
| 2024-03-01 | 2024-03-01 | Mapping | https://usegalaxy.eu | |||||
| 2017-11-09 | 2017-11-09 | https://usegalaxy.org | ||||||
| 2022-05-14 | 2022-05-14 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2024-08-28 | 2024-08-31 | Statistical calculation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2024-08-28 | 2024-08-31 | Box-Whisker plot plotting Scatter plot plotting | https://usegalaxy.org.au | |||||
| 2024-01-13 | 2024-01-13 | Validation Statistical calculation Sequence composition calculation Read mapping Sequencing quality control | https://usegalaxy.org | |||||
| 2024-02-03 | 2024-02-03 | Sequence composition calculation Statistical calculation Read mapping Sequencing quality control | https://usegalaxy.eu | |||||
| 2024-01-13 | 2024-01-13 | Validation Variant calling Statistical calculation Sequence composition calculation Read mapping Sequencing quality control | https://usegalaxy.org | |||||
| 2024-01-13 | 2024-01-13 | Variant calling Statistical calculation Sequence composition calculation Read mapping Sequencing quality control | https://usegalaxy.org | |||||
| 2024-01-13 | 2024-01-13 | Validation Variant calling Statistical calculation Sequence composition calculation Read mapping Sequencing quality control | https://usegalaxy.org | |||||
| 2023-07-24 | 2023-07-24 | Classification Visualisation Taxonomic classification | https://usegalaxy.eu | |||||
| 2014-04-22 | 2014-04-22 | https://usegalaxy.org | ||||||
| 2016-09-15 | 2016-09-15 | https://usegalaxy.org | ||||||
| 2021-02-06 | 2021-02-06 | https://usegalaxy.eu | ||||||
| 2016-03-19 | 2016-03-19 | https://usegalaxy.org | ||||||
| 2015-10-08 | 2015-10-09 | https://usegalaxy.org | ||||||
| 2014-05-07 | 2014-05-13 | https://usegalaxy.org | ||||||
| 2018-10-16 | 2018-10-18 | https://usegalaxy.eu | ||||||
| 2018-10-16 | 2018-10-16 | Gene prediction Genome assembly | https://usegalaxy.eu | |||||
| 2018-10-16 | 2018-10-16 | Gene prediction Genome assembly | https://usegalaxy.eu | |||||
| 2018-10-16 | 2018-10-16 | Gene prediction Genome assembly | https://usegalaxy.eu | |||||
| 2023-06-06 | 2023-06-06 | Statistical calculation Formatting Data handling RNA-Seq quantification Sequence composition calculation Primer removal Validation Variant calling Sequence trimming Read summarisation Read pre-processing Sequence alignment Sequencing quality control | https://usegalaxy.eu | |||||
| 2022-03-16 | 2022-03-16 | Mapping | https://usegalaxy.org.au | |||||
| 2021-09-05 | 2021-09-05 | Statistical calculation Visualisation Genome assembly Sequence composition calculation Sequence assembly validation Sequencing quality control | https://usegalaxy.org | |||||
| 2023-11-06 | 2023-11-06 | Differential gene expression analysis RNA-Seq analysis | https://usegalaxy.org | |||||
| 2018-10-16 | 2018-10-17 | Statistical calculation Sequence alignment analysis Genome assembly Sequence composition calculation Sequence comparison Primer removal Sequence trimming Chimera detection Read pre-processing Gene prediction DNA mapping Sequence similarity search Sequencing quality control | https://usegalaxy.eu | |||||
| 2023-05-21 | 2023-05-22 | Statistical calculation Cross-assembly Mapping assembly Genome assembly Sequence composition calculation De-novo assembly Sequencing quality control | https://usegalaxy.org | |||||
| 2022-10-15 | 2022-10-15 | Visualisation | https://usegalaxy.eu | |||||
| 2022-05-13 | 2022-05-13 | Mapping | https://usegalaxy.org | |||||
| 2022-05-13 | 2022-05-13 | Mapping | https://usegalaxy.org | |||||
| 2021-11-09 | 2021-11-09 | Mapping | https://usegalaxy.org | |||||
| 2020-02-19 | 2020-02-19 | Multiple sequence alignment | https://usegalaxy.eu | |||||
| 2014-11-03 | 2014-11-03 | https://usegalaxy.eu | ||||||
| 2014-10-13 | 2014-10-13 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org | |||||
| 2017-12-01 | 2017-12-01 | https://usegalaxy.org | ||||||
| 2015-09-27 | 2015-09-27 | Statistical calculation Formatting Data handling Sequence alignment analysis Genome indexing Sequence composition calculation Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2014-10-13 | 2014-10-13 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org | |||||
| 2022-11-10 | 2022-11-10 | Gene prediction Genome annotation Genome visualisation Coding region prediction | https://usegalaxy.org.au | |||||
| 2022-03-20 | 2022-03-20 | RNA-Seq analysis Data handling | https://usegalaxy.org | |||||
| 2023-06-15 | 2023-06-15 | https://usegalaxy.eu | ||||||
| 2023-06-12 | 2023-06-12 | https://usegalaxy.org | ||||||
| 2015-06-23 | 2015-06-23 | Operation Protein feature detection Sequence alignment analysis Local alignment Sequence motif recognition Global alignment Homology-based gene prediction Differential gene expression analysis Sequence analysis Sequence clustering Gene prediction Sequence alignment Ab-initio gene prediction | https://usegalaxy.eu | |||||
| 2023-12-04 | 2023-12-04 | Scaffolding Genome annotation Genome visualisation Transcriptome assembly Genome assembly Sequence assembly validation Sequence annotation | https://usegalaxy.org | |||||
| 2023-11-04 | 2023-11-04 | Statistical calculation Formatting De-novo assembly Sequence composition calculation Validation Visualisation Sequence assembly validation Sequencing quality control | https://usegalaxy.org | |||||
| 2022-11-05 | 2022-11-05 | Phasing k-mer counting Visualisation Genome assembly De-novo assembly Sequence assembly validation Scaffolding | https://usegalaxy.org | |||||
| 2016-07-29 | 2016-07-29 | Statistical calculation Formatting Data handling Sequence alignment analysis Genome indexing Sequence composition calculation Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2021-02-03 | 2021-02-03 | Statistical calculation Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.org | |||||
| 2021-09-07 | 2021-09-07 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.org | |||||
| 2015-09-17 | 2015-09-20 | https://usegalaxy.org | ||||||
| 2024-05-16 | 2024-05-18 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2019-04-04 | 2019-04-04 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2024-08-28 | 2024-08-31 | Validation Statistical calculation Sequence trimming Sequence composition calculation Read pre-processing Primer removal Sequencing quality control | https://usegalaxy.org.au | |||||
| 2024-08-31 | 2024-08-31 | Box-Whisker plot plotting Scatter plot plotting | https://usegalaxy.org.au | |||||
| 2021-03-19 | 2021-03-19 | Differential gene expression analysis RNA-Seq analysis Pathway or network analysis | transcriptomics galaxy-training-network | https://usegalaxy.org.au | ||||
| 2011-09-28 | 2011-10-14 | SNP | https://usegalaxy.org | |||||
| 2022-02-04 | 2022-02-04 | RNA-Seq analysis | https://usegalaxy.eu | |||||
| 2024-10-01 | 2024-10-01 | Phylogenetic tree generation (maximum likelihood and Bayesian methods) Multiple sequence alignment Phylogenetic tree generation (from molecular sequences) | https://usegalaxy.org | |||||
| 2019-09-09 | 2019-10-18 | Mapping | https://usegalaxy.eu | |||||
| 2019-09-08 | 2019-10-18 | Mapping | https://usegalaxy.eu | |||||
| 2019-09-27 | 2019-09-27 | Statistical calculation Formatting Genome assembly De-novo assembly Sequence composition calculation Aggregation Visualisation Sequence assembly validation Sequencing quality control | https://usegalaxy.eu | |||||
| 2019-10-04 | 2019-10-18 | Statistical calculation Generation Genome indexing Sequence composition calculation Read mapping Sequence alignment Sequencing quality control | https://usegalaxy.eu | |||||
| 2019-10-04 | 2019-10-04 | Statistical calculation Generation Genome indexing Sequence composition calculation Read mapping Sequence alignment Sequencing quality control | https://usegalaxy.eu | |||||
| 2019-10-11 | 2019-10-18 | Statistical calculation Genome indexing Sequence composition calculation Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.eu | |||||
| 2019-11-01 | 2019-11-01 | Genome visualisation Operation Genome assembly Sequence annotation Homology-based gene prediction Scaffolding Genome annotation Transcriptome assembly Sequence assembly validation Gene prediction Ab-initio gene prediction | https://usegalaxy.eu | |||||
| 2021-03-19 | 2021-03-19 | computational-chemistry galaxy-training-network | https://usegalaxy.org.au | |||||
| 2024-10-13 | 2024-10-13 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.eu | |||||
| 2024-01-13 | 2024-01-13 | Validation Statistical calculation Sequence composition calculation Read mapping Sequencing quality control | https://usegalaxy.org | |||||
| 2015-04-23 | 2015-06-02 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org | |||||
| 2024-01-13 | 2024-01-13 | Statistical calculation Genome indexing Sequence composition calculation Read mapping Validation Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2024-01-13 | 2024-01-13 | Validation Variant calling Statistical calculation Sequence composition calculation Read mapping Sequencing quality control | https://usegalaxy.org | |||||
| 2017-10-13 | 2017-10-13 | Statistical calculation Formatting Data handling Sequence alignment analysis Genome indexing Sequence composition calculation Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2020-04-03 | 2020-04-04 | https://usegalaxy.eu | ||||||
| 2019-12-02 | 2019-12-02 | Statistical calculation Data handling RNA-Seq quantification Genome indexing Sequence composition calculation Read mapping Read summarisation Generation Sequence alignment Sequencing quality control | https://usegalaxy.eu | |||||
| 2018-04-03 | 2018-04-03 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2012-11-09 | 2012-11-09 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org | |||||
| 2021-03-19 | 2021-03-19 | Peak detection Mass spectrum visualisation Chromatogram visualisation Validation Chromatographic alignment Filtering Label-free quantification | metabolomics galaxy-training-network | https://usegalaxy.org.au | ||||
| 2021-11-11 | 2021-12-16 | https://usegalaxy.org | ||||||
| 2024-08-25 | 2024-08-31 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2018-02-19 | 2018-02-23 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org | |||||
| 2021-08-21 | 2021-08-21 | Genome assembly De-novo assembly Aggregation Pairwise sequence alignment Sequence analysis Box-Whisker plot plotting Mapping assembly Sequence assembly visualisation Scatter plot plotting | HackBioInternship2021 | https://usegalaxy.eu | ||||
| 2024-05-29 | 2024-05-31 | https://usegalaxy.fr | ||||||
| 2019-12-23 | 2019-12-23 | Genome visualisation | https://usegalaxy.eu | |||||
| 2017-03-23 | 2017-03-23 | https://usegalaxy.eu | ||||||
| 2017-02-10 | 2017-02-11 | https://usegalaxy.org | ||||||
| 2023-01-05 | 2023-01-05 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2023-01-05 | 2023-01-05 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2023-01-05 | 2023-01-05 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2023-01-05 | 2023-01-05 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2023-01-04 | 2023-01-04 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2023-01-03 | 2023-01-03 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2023-01-05 | 2023-01-05 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2023-01-05 | 2023-01-05 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2023-01-04 | 2023-01-04 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2023-01-01 | 2023-01-01 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2023-01-01 | 2023-01-01 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2023-01-01 | 2023-01-01 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2023-01-01 | 2023-01-01 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2023-01-01 | 2023-01-01 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2023-01-01 | 2023-01-01 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2023-01-01 | 2023-01-01 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2023-01-01 | 2023-01-01 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2023-01-02 | 2023-01-02 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2023-01-04 | 2023-01-04 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2023-01-02 | 2023-01-02 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2023-01-01 | 2023-01-01 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2023-01-01 | 2023-01-01 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2023-01-02 | 2023-01-02 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2023-09-13 | 2023-09-13 | Sequence contamination filtering Sequence alignment Genome alignment Generation Filtering Read mapping Genome indexing Sequencing quality control | https://usegalaxy.eu | |||||
| 2024-01-10 | 2024-01-10 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2024-01-10 | 2024-01-10 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2024-01-10 | 2024-01-10 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2023-11-03 | 2023-11-03 | Statistical calculation Sequence composition calculation Primer removal Validation Sequence trimming Read pre-processing Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2021-05-02 | 2021-05-05 | https://usegalaxy.org | ||||||
| 2021-05-02 | 2021-05-05 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2021-08-20 | 2021-08-20 | https://usegalaxy.eu | ||||||
| 2024-01-23 | 2024-01-25 | Statistical calculation Phylogenetic analysis Sequence alignment analysis Phylogenetic inference Primer removal Species frequency estimation Sequence similarity search Sequencing quality control Taxonomic classification Sequence composition calculation Sequence comparison Phylogenetic tree visualisation Validation Sequence trimming Visualisation Conversion Phylogenetic tree analysis Read pre-processing Nucleic acid sequence analysis Phylogenetic tree editing | https://usegalaxy.eu | |||||
| 2022-07-03 | 2022-07-03 | Sequence read processing Phylogenetic analysis Taxonomic classification Phylogenetic tree generation Visualisation Sequence clustering Phylogenetic tree analysis DNA barcoding Phylogenetic tree reconstruction Sequencing quality control | https://usegalaxy.org | |||||
| 2016-04-22 | 2016-04-23 | https://usegalaxy.org | ||||||
| 2013-03-04 | 2013-04-19 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org | |||||
| 2020-06-01 | 2020-06-01 | Sequence contamination filtering Statistical calculation Sequence composition calculation Read mapping Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2023-08-18 | 2023-08-18 | Mapping | https://usegalaxy.org | |||||
| 2020-09-03 | 2020-09-03 | https://usegalaxy.org | ||||||
| 2018-09-04 | 2018-09-04 | Statistical calculation Formatting Data handling Sequence alignment analysis Genome indexing Sequence composition calculation Read mapping Variant calling Generation Sequence alignment Sequencing quality control | Polymorphism | https://usegalaxy.org | ||||
| 2024-10-14 | 2024-10-16 | https://usegalaxy.eu | ||||||
| 2024-01-13 | 2024-01-13 | Statistical calculation Genome indexing Sequence composition calculation Read mapping Validation Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2021-03-19 | 2021-03-19 | Sequence visualisation | visualisation galaxy-training-network | https://usegalaxy.org.au | ||||
| 2019-04-04 | 2019-04-04 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2019-03-26 | 2019-03-26 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2021-08-10 | 2021-08-10 | Sequence contamination filtering Data handling Genome indexing Generation Read mapping Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2022-01-10 | 2022-01-10 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2022-12-20 | 2022-12-21 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.eu | |||||
| 2024-03-20 | 2024-03-20 | https://usegalaxy.eu | ||||||
| 2021-08-21 | 2021-08-21 | Genome assembly De-novo assembly Aggregation Pairwise sequence alignment Sequence analysis Box-Whisker plot plotting Mapping assembly Sequence assembly visualisation Scatter plot plotting | HackBioInternship2021 | https://usegalaxy.eu | ||||
| 2024-05-13 | 2024-06-25 | https://usegalaxy.eu | ||||||
| 2022-01-10 | 2022-01-10 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2018-04-03 | 2018-04-04 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2024-01-13 | 2024-01-13 | Statistical calculation Genome visualisation Sequence composition calculation Read mapping Primer removal Variant calling Sequence trimming Read pre-processing Sequencing quality control | https://usegalaxy.org | |||||
| 2022-11-29 | 2022-11-29 | Mapping | https://usegalaxy.eu | |||||
| 2018-03-05 | 2018-04-10 | Taxonomic classification | https://usegalaxy.org | |||||
| 2020-05-11 | 2020-05-12 | Statistical calculation Formatting Data handling Sequence alignment analysis Genome indexing Sequence composition calculation Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2024-01-10 | 2024-01-13 | https://usegalaxy.org | ||||||
| 2017-02-24 | 2017-03-30 | Statistical calculation Formatting Data handling Sequence alignment analysis Genome indexing Sequence composition calculation Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2016-08-07 | 2016-08-07 | Variant calling Statistical calculation Read mapping | https://usegalaxy.org | |||||
| 2017-11-09 | 2017-11-09 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org | |||||
| 2021-08-21 | 2021-08-21 | Genome assembly De-novo assembly Aggregation Pairwise sequence alignment Sequence analysis Box-Whisker plot plotting Mapping assembly Sequence assembly visualisation Scatter plot plotting | HackBioInternship2021 | https://usegalaxy.eu | ||||
| 2022-02-21 | 2022-02-21 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.eu | |||||
| 2023-05-24 | 2023-05-24 | Statistical calculation Data handling RNA-Seq quantification Sequence composition calculation Read mapping Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org | |||||
| 2023-11-06 | 2023-11-06 | Statistical calculation Sequence trimming Sequence composition calculation Read pre-processing Primer removal Sequencing quality control | https://usegalaxy.org | |||||
| 2022-05-18 | 2022-05-18 | Statistical calculation Sequence trimming Sequence composition calculation Read pre-processing Primer removal Sequencing quality control | https://usegalaxy.org | |||||
| 2020-05-14 | 2020-05-14 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2021-09-25 | 2021-09-25 | Statistical calculation Data handling Sequence composition calculation Primer removal Validation Sequence trimming Read pre-processing Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2020-05-14 | 2020-05-14 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2021-08-20 | 2021-08-20 | Genome assembly De-novo assembly Aggregation Pairwise sequence alignment Sequence analysis Box-Whisker plot plotting Mapping assembly Sequence assembly visualisation Scatter plot plotting | HackBio2021Internship | https://usegalaxy.eu | ||||
| 2012-07-25 | 2012-10-11 | https://usegalaxy.org | ||||||
| 2019-04-02 | 2019-04-04 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2024-05-27 | 2024-05-27 | Statistical calculation Data handling RNA-Seq quantification Gene expression analysis Sequence composition calculation Primer removal Sequence annotation Sequence trimming RNA-Seq analysis Read pre-processing Sequencing quality control | https://usegalaxy.eu | |||||
| 2022-12-08 | 2022-12-08 | Statistical calculation Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Annotation Sequencing quality control | https://usegalaxy.org | |||||
| 2016-03-11 | 2016-03-11 | https://usegalaxy.org | ||||||
| 2021-01-24 | 2021-01-24 | RNA-Seq analysis | https://usegalaxy.eu | |||||
| 2022-02-04 | 2022-02-04 | RNA-Seq analysis | https://usegalaxy.eu | |||||
| 2022-03-21 | 2022-03-21 | Statistical calculation Data handling RNA-Seq quantification Gene expression analysis Sequence composition calculation Primer removal Sequence trimming RNA-Seq analysis Read pre-processing Sequencing quality control | https://usegalaxy.org | |||||
| 2024-04-11 | 2024-04-11 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Sequence trimming Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2020-06-06 | 2022-01-26 | Differential gene expression analysis Genome visualisation Read mapping Nucleic acid sequence analysis | https://usegalaxy.org | |||||
| 2019-02-28 | 2019-03-29 | Statistical calculation Data handling Sequence composition calculation Primer removal Validation Sequence trimming Read pre-processing Sequence alignment Sequencing quality control | https://usegalaxy.org.au | |||||
| 2022-02-21 | 2022-02-21 | Validation Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2022-02-04 | 2022-02-04 | RNA-Seq analysis | https://usegalaxy.eu | |||||
| 2022-03-15 | 2022-03-15 | Validation Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.org | |||||
| 2018-08-01 | 2018-08-01 | https://usegalaxy.org | ||||||
| 2023-05-02 | 2023-05-03 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2023-05-02 | 2023-05-02 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2021-02-06 | 2021-02-06 | Validation Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2023-11-06 | 2023-11-06 | Statistical calculation Sequence composition calculation Primer removal Validation Sequence trimming Read pre-processing Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2018-05-09 | 2018-05-09 | Sequence alignment | https://usegalaxy.org | |||||
| 2021-02-06 | 2021-02-06 | RNA-Seq analysis Annotation | https://usegalaxy.eu | |||||
| 2024-03-01 | 2024-03-01 | Validation Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2024-03-01 | 2024-03-01 | RNA-Seq analysis | https://usegalaxy.eu | |||||
| 2021-10-18 | 2021-10-18 | Statistical calculation Formatting Data handling RNA-Seq quantification Sequence composition calculation Primer removal Validation Sequence trimming Read summarisation Read pre-processing Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2022-03-21 | 2022-03-22 | https://usegalaxy.org | ||||||
| 2023-11-20 | 2023-11-20 | Statistical calculation Data handling Sequence composition calculation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2023-05-02 | 2023-05-02 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2024-03-01 | 2024-03-01 | Mapping | https://usegalaxy.eu | |||||
| 2022-01-03 | 2022-01-03 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2015-10-13 | 2015-10-13 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org | |||||
| 2024-02-08 | 2024-02-08 | https://usegalaxy.org | ||||||
| 2018-03-09 | 2018-03-09 | mapping-by-sequencing mimodd | https://usegalaxy.eu | |||||
| 2018-02-06 | 2018-02-20 | https://usegalaxy.org | ||||||
| 2022-04-10 | 2022-04-10 | Statistical calculation Formatting Data handling Sequence alignment analysis Genome indexing Sequence composition calculation Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.eu | |||||
| 2017-05-03 | 2017-05-03 | Statistical calculation Genome indexing Sequence composition calculation Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2024-01-08 | 2024-01-09 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2023-12-08 | 2023-12-08 | Statistical calculation Visualisation Data handling Taxonomic classification Sequence composition calculation Sequencing quality control | https://usegalaxy.org | |||||
| 2021-08-12 | 2021-08-13 | Variant calling Sequence contamination filtering Formatting Statistical calculation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2021-08-12 | 2021-08-13 | https://usegalaxy.org | ||||||
| 2015-02-08 | 2015-08-15 | https://usegalaxy.org | ||||||
| 2020-04-02 | 2021-01-06 | https://usegalaxy.eu | ||||||
| 2024-02-29 | 2024-02-29 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.eu | |||||
| 2024-02-29 | 2024-02-29 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.eu | |||||
| 2024-02-29 | 2024-02-29 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.eu | |||||
| 2024-02-29 | 2024-02-29 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.eu | |||||
| 2024-03-01 | 2024-03-01 | Mapping | https://usegalaxy.eu | |||||
| 2024-03-01 | 2024-03-01 | Mapping | https://usegalaxy.eu | |||||
| 2024-02-29 | 2024-02-29 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.eu | |||||
| 2024-03-01 | 2024-03-01 | Mapping | https://usegalaxy.eu | |||||
| 2024-03-01 | 2024-03-01 | Validation Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2024-03-01 | 2024-03-01 | RNA-Seq analysis | https://usegalaxy.eu | |||||
| 2024-03-01 | 2024-03-01 | Validation Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2024-03-01 | 2024-03-01 | RNA-Seq analysis | https://usegalaxy.eu | |||||
| 2024-03-01 | 2024-03-01 | Validation Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2024-03-01 | 2024-03-01 | RNA-Seq analysis | https://usegalaxy.eu | |||||
| 2024-03-01 | 2024-03-01 | Validation Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2024-03-08 | 2024-03-08 | Statistical calculation Scatter plot plotting Box-Whisker plot plotting Sequence composition calculation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2024-03-02 | 2024-03-02 | RNA-Seq analysis | https://usegalaxy.eu | |||||
| 2024-03-08 | 2024-03-08 | Statistical calculation Sequence composition calculation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2024-03-15 | 2024-03-15 | https://usegalaxy.eu | ||||||
| 2021-04-09 | 2023-11-09 | MIT | Darwin core Data package DataOne EML Ecological metadata language Galaxy Galaxy-E eml-annotation | WorkflowHub | ||||
| 2023-02-06 | 2023-02-06 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.eu | |||||
| 2021-09-29 | 2021-09-30 | Statistical calculation Formatting Data handling Sequence alignment analysis Genome indexing Sequence composition calculation Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2013-03-13 | 2013-04-19 | https://usegalaxy.org | ||||||
| 2023-01-21 | 2023-06-30 | Sequence analysis | https://usegalaxy.eu | |||||
| 2022-02-04 | 2022-02-04 | Validation Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2011-11-15 | 2011-11-15 | Multiple sequence alignment | https://usegalaxy.org | |||||
| 2012-07-25 | 2012-07-26 | Variant calling Statistical calculation | https://usegalaxy.org | |||||
| 2024-01-13 | 2024-01-13 | Validation Statistical calculation Sequence composition calculation Read mapping Sequencing quality control | https://usegalaxy.org | |||||
| 2021-01-20 | 2021-01-21 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2024-05-31 | 2024-06-03 | https://usegalaxy.eu | ||||||
| 2014-10-22 | 2014-10-22 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org | |||||
| 2021-04-02 | 2021-04-04 | Statistical calculation Formatting Data handling RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Sequence trimming Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.fr | |||||
| 2023-11-07 | 2023-11-12 | https://usegalaxy.eu | ||||||
| 2024-05-08 | 2024-05-08 | Statistical calculation Data handling RNA-Seq quantification Gene expression analysis Sequence composition calculation Primer removal Sequence annotation Sequence trimming RNA-Seq analysis Read pre-processing Sequencing quality control | https://usegalaxy.eu | |||||
| 2011-02-28 | 2011-03-01 | https://usegalaxy.org | ||||||
| 2024-07-28 | 2024-07-28 | https://usegalaxy.org | ||||||
| 2024-05-27 | 2024-07-01 | https://usegalaxy.eu | ||||||
| 2022-01-31 | 2022-01-31 | Statistical calculation Sequence analysis Sequence composition calculation Sequencing quality control | https://usegalaxy.eu | |||||
| 2013-12-16 | 2014-05-08 | https://usegalaxy.org | ||||||
| 2023-07-25 | 2023-07-25 | Validation Sequence contamination filtering Genome indexing Generation Read mapping Sequence alignment Sequencing quality control | https://usegalaxy.eu | |||||
| 2023-05-18 | 2023-05-18 | https://usegalaxy.eu | ||||||
| 2023-05-18 | 2023-05-18 | https://usegalaxy.eu | ||||||
| 2021-06-19 | 2021-06-19 | Statistical calculation Genome indexing Sequence composition calculation Read mapping Variant calling Sequence analysis Generation Sequence alignment Genetic variation analysis Sequencing quality control | https://usegalaxy.eu | |||||
| 2014-09-22 | 2014-09-22 | https://usegalaxy.eu | ||||||
| 2024-02-27 | 2024-02-27 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org | |||||
| 2023-10-19 | 2023-10-19 | Statistical calculation Data handling Sequence composition calculation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2023-10-06 | 2023-10-06 | Phylogenetic tree generation (maximum likelihood and Bayesian methods) Multiple sequence alignment Phylogenetic tree generation (from molecular sequences) | https://usegalaxy.org | |||||
| 2021-10-26 | 2021-10-26 | https://usegalaxy.org | ||||||
| 2021-10-19 | 2021-10-19 | Statistical calculation Formatting Data handling Sequence alignment analysis Genome indexing Sequence composition calculation Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2017-11-14 | 2017-12-17 | https://usegalaxy.org | ||||||
| 2016-06-11 | 2016-06-11 | Statistical calculation Formatting Data handling Sequence alignment analysis Genome indexing Sequence composition calculation Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2011-07-25 | 2011-07-25 | https://usegalaxy.org | ||||||
| 2010-11-06 | 2010-11-06 | https://usegalaxy.org | ||||||
| 2010-10-25 | 2010-10-25 | https://usegalaxy.org | ||||||
| 2023-05-03 | 2023-05-03 | Statistical calculation RNA-Seq quantification Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming Read summarisation RNA-Seq analysis Read pre-processing Sequence alignment Sequencing quality control | https://usegalaxy.org.au | |||||
| 2021-05-08 | 2021-05-08 | Variant calling Statistical calculation Genome indexing Generation Read mapping Sequence alignment | https://usegalaxy.org.au | |||||
| 2016-10-06 | 2016-10-06 | Statistical calculation Formatting Genome indexing Sequence composition calculation Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2016-11-12 | 2016-11-12 | Variant calling Statistical calculation Formatting Sequence composition calculation Mapping Sequencing quality control | https://usegalaxy.org | |||||
| 2015-11-12 | 2015-11-12 | Statistical calculation Formatting Data handling Sequence alignment analysis Genome indexing Sequence composition calculation Read mapping Variant calling Generation Sequence alignment Sequencing quality control | variant calling | https://usegalaxy.org | ||||
| 2024-01-12 | 2024-01-13 | https://usegalaxy.org | ||||||
| 2020-10-05 | 2020-10-06 | Variant calling Statistical calculation Genome indexing Generation Read mapping Sequence alignment | https://usegalaxy.org | |||||
| 2017-03-29 | 2017-03-29 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2022-01-10 | 2022-01-10 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2016-06-05 | 2016-06-05 | Statistical calculation Formatting Genome indexing Sequence composition calculation Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2023-05-02 | 2023-05-02 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Sequence trimming Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2023-11-05 | 2023-11-05 | https://usegalaxy.org | ||||||
| 2023-04-28 | 2023-05-02 | Statistical calculation RNA-Seq quantification Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming Read summarisation RNA-Seq analysis Read pre-processing Sequence alignment Sequencing quality control | https://usegalaxy.org.au | |||||
| 2023-05-04 | 2023-05-04 | Validation Statistical calculation Sequence trimming Sequence composition calculation Read pre-processing Primer removal Sequencing quality control | https://usegalaxy.org.au | |||||
| 2023-05-04 | 2023-05-04 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2019-10-07 | 2019-10-07 | Differential gene expression analysis RNA-Seq analysis Transcriptome assembly RNA-Seq quantification Sequence alignment Read summarisation Sequence annotation | https://usegalaxy.eu | |||||
| 2024-04-11 | 2024-04-11 | Antimicrobial resistance prediction Box-Whisker plot plotting Genome assembly Sequence assembly visualisation Aggregation Scatter plot plotting | https://usegalaxy.org.au | |||||
| 2022-01-10 | 2022-01-10 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2022-06-13 | 2022-06-13 | Statistical calculation Formatting Data handling Sequence alignment analysis Genome indexing Sequence composition calculation Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.eu | |||||
| 2022-06-13 | 2022-06-13 | Statistical calculation Formatting Data handling Sequence alignment analysis Genome indexing Sequence composition calculation Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.eu | |||||
| 2024-01-25 | 2024-01-25 | Statistical calculation Formatting De-novo assembly Sequence composition calculation Read mapping Primer removal Validation Sequence trimming Visualisation Read pre-processing Sequence assembly validation Sequencing quality control | https://usegalaxy.org | |||||
| 2024-04-11 | 2024-04-11 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2024-04-09 | 2024-04-09 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2024-04-09 | 2024-04-09 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2024-04-10 | 2024-04-10 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2021-03-19 | 2021-03-19 | Sequence visualisation | visualisation galaxy-training-network | https://usegalaxy.org.au | ||||
| 2021-05-12 | 2021-05-12 | Sequence read processing Phylogenetic analysis Taxonomic classification Visualisation Sequence clustering DNA barcoding Sequencing quality control | https://usegalaxy.org | |||||
| 2023-04-27 | 2023-05-05 | Statistical calculation RNA-Seq quantification Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming Read summarisation RNA-Seq analysis Read pre-processing Sequence alignment Sequencing quality control | https://usegalaxy.org.au | |||||
| 2023-05-04 | 2023-05-04 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2023-05-02 | 2023-05-03 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2022-05-11 | 2022-05-12 | Statistical calculation Formatting RNA-Seq quantification Data handling Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2023-05-03 | 2023-05-03 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2024-04-18 | 2024-04-30 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2023-05-01 | 2023-05-04 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2024-04-19 | 2024-04-19 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2024-04-18 | 2024-04-18 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2023-05-04 | 2023-05-04 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2023-05-02 | 2023-05-02 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2023-04-26 | 2023-04-26 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Validation Differential gene expression analysis RNA-Seq analysis Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2023-05-04 | 2023-05-04 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2023-04-25 | 2023-05-04 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2024-04-02 | 2024-04-02 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2022-05-11 | 2022-05-11 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2023-05-04 | 2023-05-05 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2024-04-12 | 2024-04-12 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2024-04-07 | 2024-04-07 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2024-03-30 | 2024-03-30 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2023-05-02 | 2023-05-02 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2023-05-02 | 2023-05-02 | Validation Statistical calculation Sequence trimming Sequence composition calculation Read pre-processing Sequence alignment Primer removal Sequencing quality control | https://usegalaxy.org.au | |||||
| 2022-05-11 | 2022-05-12 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2024-03-21 | 2024-03-21 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2024-03-21 | 2024-03-21 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2017-03-27 | 2017-05-18 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2024-04-11 | 2024-04-11 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2024-04-10 | 2024-04-10 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2024-04-09 | 2024-04-10 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2024-03-25 | 2024-04-05 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2023-05-08 | 2023-05-08 | Statistical calculation Sequence composition calculation Primer removal Validation Sequence trimming Read pre-processing Sequence alignment Nucleic acid sequence analysis Sequencing quality control | https://usegalaxy.org.au | |||||
| 2023-05-04 | 2023-05-04 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Validation Differential gene expression analysis RNA-Seq analysis Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2023-04-27 | 2023-04-29 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Validation Differential gene expression analysis RNA-Seq analysis Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2024-03-26 | 2024-03-30 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2024-03-26 | 2024-03-30 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2024-04-11 | 2024-04-11 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2022-04-06 | 2022-04-06 | Phylogenetic tree visualisation Read mapping Variant calling Phylogenetic tree generation | https://usegalaxy.eu | |||||
| 2021-03-09 | 2021-03-16 | Statistical calculation Sequence trimming Read pre-processing Sequence composition calculation Read mapping Primer removal Sequencing quality control | https://usegalaxy.org | |||||
| 2021-01-03 | 2021-01-03 | Genome annotation Transcriptome assembly Genome assembly Sequence assembly validation Scaffolding | https://usegalaxy.org | |||||
| 2020-06-20 | 2020-06-25 | Variant calling Statistical calculation Read mapping | https://usegalaxy.org | |||||
| 2016-07-31 | 2016-07-31 | Statistical calculation Formatting Data handling Sequence alignment analysis Genome indexing Sequence composition calculation Read mapping Variant calling Generation Sequence alignment Sequencing quality control | Polymorphism Hg19 Courseraproject | https://usegalaxy.org | ||||
| 2011-02-09 | 2011-03-05 | https://usegalaxy.org | ||||||
| 2024-02-07 | 2024-03-06 | Differential gene expression analysis RNA-Seq analysis Data handling Read mapping Nucleic acid sequence analysis | https://usegalaxy.fr | |||||
| 2023-05-04 | 2023-05-04 | Statistical calculation RNA-Seq quantification Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming Read summarisation RNA-Seq analysis Read pre-processing Sequence alignment Sequencing quality control | https://usegalaxy.org.au | |||||
| 2024-03-08 | 2024-03-08 | Statistical calculation Sequence trimming Sequence composition calculation Read pre-processing Primer removal Sequencing quality control | https://usegalaxy.org | |||||
| 2023-05-05 | 2023-05-05 | https://usegalaxy.org.au | ||||||
| 2023-05-05 | 2023-05-05 | https://usegalaxy.org.au | ||||||
| 2021-10-07 | 2023-11-21 | Peak detection Mass spectrum visualisation Chromatogram visualisation Validation Chromatographic alignment Filtering Label-free quantification | metabolomics GCMS DEMO W4M | https://usegalaxy.fr | ||||
| 2020-06-19 | 2020-06-19 | Statistical calculation Formatting Data handling Sequence alignment analysis Genome indexing Sequence composition calculation Read mapping Variant calling Generation Sequence file editing Sequence alignment Sequencing quality control | https://usegalaxy.org.au | |||||
| 2024-04-11 | 2024-04-11 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Validation Differential gene expression analysis RNA-Seq analysis Read summarisation Sequencing quality control | BINF6000 ENCFF687IHU ENCFF821RSH | https://usegalaxy.org.au | ||||
| 2020-11-05 | 2020-11-05 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2018-10-08 | 2019-02-10 | Sequence analysis Sequence alignment analysis Sequence alignment Local alignment Multiple sequence alignment Global alignment | https://usegalaxy.org | |||||
| 2021-06-11 | 2021-06-11 | climate | https://usegalaxy.eu | |||||
| 2015-10-23 | 2015-10-23 | Statistical calculation Formatting Data handling Sequence alignment analysis Genome indexing Sequence composition calculation Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2019-02-06 | 2019-02-06 | Statistical calculation Formatting Data handling Sequence alignment analysis Genome indexing Sequence composition calculation Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2020-12-16 | 2020-12-21 | Filtering Visualisation Prediction and recognition Formatting | https://usegalaxy.eu | |||||
| 2019-11-19 | 2019-11-22 | Statistical calculation Formatting Data handling Sequence alignment analysis Genome indexing Sequence composition calculation Read mapping Variant calling Generation Sequence alignment Sequencing quality control | variant snps human | https://usegalaxy.org | ||||
| 2019-06-10 | 2019-06-29 | Statistical calculation Heat map generation Standardisation and normalisation Protein quantification Visualisation Imputation Clustering Principal component plotting | https://usegalaxy.eu | |||||
| 2018-10-16 | 2018-11-01 | Statistical calculation Sequence alignment analysis Genome assembly Sequence composition calculation Sequence comparison Primer removal Sequence trimming Chimera detection Read pre-processing Gene prediction DNA mapping Sequence similarity search Sequencing quality control | https://usegalaxy.eu | |||||
| 2018-10-16 | 2018-11-01 | Statistical calculation Sequence alignment analysis Genome assembly Sequence composition calculation Sequence comparison Primer removal Sequence trimming Chimera detection Read pre-processing Gene prediction DNA mapping Sequence similarity search Sequencing quality control | https://usegalaxy.eu | |||||
| 2020-11-23 | 2020-11-24 | Visualisation Prediction and recognition | https://usegalaxy.eu | |||||
| 2020-11-23 | 2020-11-24 | Visualisation Prediction and recognition | https://usegalaxy.eu | |||||
| 2020-11-23 | 2021-04-07 | Visualisation Prediction and recognition | https://usegalaxy.eu | |||||
| 2024-05-27 | 2024-05-27 | Statistical calculation Data handling RNA-Seq quantification Gene expression analysis Sequence composition calculation Primer removal Sequence annotation Sequence trimming RNA-Seq analysis Read pre-processing Sequencing quality control | https://usegalaxy.eu | |||||
| 2022-06-12 | 2023-01-16 | CC-BY-4.0 | WorkflowHub | |||||
| 2024-01-25 | 2024-01-25 | Statistical calculation Formatting Data handling RNA-Seq quantification Sequence composition calculation Primer removal Validation Sequence trimming Visualisation Read summarisation Read pre-processing Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2023-04-25 | 2023-05-05 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Validation Differential gene expression analysis RNA-Seq analysis Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2023-04-30 | 2023-05-04 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2020-05-14 | 2020-05-14 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2024-04-30 | 2024-04-30 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2017-03-30 | 2017-03-30 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2024-02-17 | 2024-02-17 | Mapping | 1 | https://usegalaxy.eu | ||||
| 2024-02-16 | 2024-02-16 | Statistical calculation Genome visualisation RNA-Seq quantification Sequence alignment Sequence composition calculation Mapping Validation Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2024-02-17 | 2024-02-17 | Validation Statistical calculation Genome visualisation RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | 2 | https://usegalaxy.eu | ||||
| 2024-02-17 | 2024-02-17 | RNA-Seq analysis | 2 | https://usegalaxy.eu | ||||
| 2024-02-17 | 2024-02-18 | Gene set testing Gene-set enrichment analysis Gene functional annotation | 2 | https://usegalaxy.eu | ||||
| 2024-02-18 | 2024-02-18 | Statistical calculation Data handling De-novo assembly Sequence composition calculation Sequence comparison Sequence annotation Validation Sequence contamination filtering RNA-Seq analysis Transcriptome assembly Sequence analysis Sequence assembly validation Sequence alignment Protein sequence analysis Sequencing quality control | 3 | https://usegalaxy.eu | ||||
| 2021-11-16 | 2021-11-17 | Statistical calculation Sequence composition calculation Read mapping Nucleic acid sequence analysis Sequencing quality control | https://usegalaxy.eu | |||||
| 2012-03-28 | 2012-03-28 | https://usegalaxy.org | ||||||
| 2024-06-05 | 2024-08-03 | Peak detection Mass spectrum visualisation Chromatogram visualisation Validation Chromatographic alignment Filtering Label-free quantification | GC-MS Metabolomics 2024 | https://usegalaxy.fr | ||||
| 2021-10-05 | 2021-10-19 | Sequence trimming Formatting Data handling Read pre-processing Read mapping Primer removal | https://usegalaxy.eu | |||||
| 2022-07-24 | 2022-07-24 | Sequence composition calculation Statistical calculation Read mapping Sequencing quality control | https://usegalaxy.org | |||||
| 2022-12-12 | 2022-12-12 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org | |||||
| 2023-01-01 | 2023-01-01 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2023-01-01 | 2023-01-01 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2020-05-12 | 2020-05-14 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2024-01-29 | 2024-02-04 | https://usegalaxy.eu | ||||||
| 2020-08-31 | 2020-08-31 | Sequence composition calculation Statistical calculation Sequencing quality control | epigenetics galaxy-training-network | https://usegalaxy.org.au | ||||
| 2022-06-14 | 2024-07-31 | Taxonomic classification | https://usegalaxy.fr | |||||
| 2016-04-07 | 2016-04-07 | Statistical calculation Formatting Data handling Sequence alignment analysis Sequence composition calculation Sequencing quality control | https://usegalaxy.org | |||||
| 2021-03-24 | 2021-03-25 | Statistical calculation Visualisation Taxonomic classification Genome assembly Sequence composition calculation Aggregation Sequence assembly validation Sequencing quality control | https://usegalaxy.eu | |||||
| 2024-10-12 | 2024-10-12 | Statistical calculation Formatting Genome indexing Sequence composition calculation Mapping Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.eu | |||||
| 2021-09-26 | 2023-01-16 | Apache-2.0 | Pathway Analysis Semantic Comparison Semantic Network Analysis | WorkflowHub | ||||
| 2024-01-13 | 2024-01-13 | Validation Variant calling Statistical calculation Sequence composition calculation Read mapping Sequencing quality control | https://usegalaxy.org | |||||
| 2021-12-10 | 2021-12-10 | Statistical calculation Data handling Sequence alignment analysis Genome indexing Sequence composition calculation Read mapping Primer removal Sequence trimming Generation Read pre-processing Sequence alignment Sequencing quality control | https://usegalaxy.eu | |||||
| 2020-04-03 | 2020-04-03 | Statistical calculation Data handling Sequence alignment analysis Genome indexing Sequence composition calculation Read mapping Primer removal Sequence trimming Generation Read pre-processing Sequence alignment Sequencing quality control | https://usegalaxy.eu | |||||
| 2018-05-01 | 2018-05-07 | Statistical calculation Data handling Sequence alignment analysis Genome indexing Sequence composition calculation Read mapping Primer removal Sequence trimming Generation Read pre-processing Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2022-02-08 | 2022-03-11 | Genome visualisation | https://usegalaxy.org.au | |||||
| 2024-06-26 | 2024-06-26 | Statistical calculation Data handling RNA-Seq quantification Sequence composition calculation Primer removal Validation Sequence trimming Read summarisation Read pre-processing Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2024-07-12 | 2024-07-12 | Peak detection Mass spectrum visualisation Chromatogram visualisation Validation Chromatographic alignment Filtering Label-free quantification | https://usegalaxy.fr | |||||
| 2018-10-16 | 2018-11-08 | https://usegalaxy.org | ||||||
| 2016-05-03 | 2016-05-03 | https://usegalaxy.org | ||||||
| 2023-01-09 | 2023-01-10 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Differential gene expression analysis RNA-Seq analysis Transcriptome assembly Read summarisation Sequencing quality control | https://usegalaxy.org | |||||
| 2019-07-01 | 2019-07-01 | https://usegalaxy.eu | ||||||
| 2024-03-16 | 2024-03-16 | Statistical calculation Data handling Genome assembly Sequence composition calculation Primer removal Aggregation Coding region prediction Scaffolding Genome annotation Visualisation Sequence trimming Transcriptome assembly Gene prediction Read pre-processing Sequence assembly validation Sequencing quality control | https://usegalaxy.eu | |||||
| 2023-11-15 | 2023-11-16 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.fr | |||||
| 2024-03-01 | 2024-03-02 | Validation Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Read summarisation Sequencing quality control | https://usegalaxy.eu | |||||
| 2020-07-23 | 2020-07-23 | Visualisation | https://usegalaxy.eu | |||||
| 2021-03-10 | 2021-03-10 | Differential gene expression analysis | https://usegalaxy.eu | |||||
| 2024-04-10 | 2024-04-10 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2024-04-11 | 2024-04-11 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2022-03-14 | 2022-03-14 | CC-BY-4.0 | Peak detection Mass spectrum visualisation Chromatogram visualisation Validation Chromatographic alignment Filtering Label-free quantification | LC-MSMS Metabolomics ESI Positive W4M DDA | https://usegalaxy.fr | |||
| 2023-12-14 | 2023-12-14 | Statistical calculation Formatting Data handling Sequence alignment analysis Genome assembly Sequence composition calculation Read mapping Primer removal Variant calling Sequence contamination filtering Sequence trimming Sequence file editing Read pre-processing Sequencing quality control | name:microGalaxy | https://usegalaxy.eu | ||||
| 2018-10-31 | 2018-11-07 | Sequence read processing Phylogenetic analysis Taxonomic classification Visualisation Sequence clustering DNA barcoding Sequencing quality control | https://usegalaxy.org.au | |||||
| 2020-01-10 | 2020-12-08 | Genome visualisation | assembly | https://usegalaxy.org.au | ||||
| 2020-01-10 | 2020-12-08 | Genome assembly De-novo assembly Genome indexing Read mapping Analysis Generation Box-Whisker plot plotting Cross-assembly Mapping assembly Read alignment Sequence assembly Sequence assembly visualisation Sequence alignment Scatter plot plotting | assembly | https://usegalaxy.org.au | ||||
| 2020-01-10 | 2020-12-08 | Genome visualisation Genome indexing Generation Read mapping Sequence alignment | assembly | https://usegalaxy.org.au | ||||
| 2017-04-08 | 2017-04-08 | Statistical calculation Formatting Data handling Sequence alignment analysis Genome indexing Sequence composition calculation Read mapping Variant calling Generation Sequence alignment Sequencing quality control | https://usegalaxy.org | |||||
| 2019-03-25 | 2019-12-17 | Variant calling RNA-Seq analysis Transcriptome assembly Statistical calculation Sequence alignment Sequence annotation | Proteogenomics | https://usegalaxy.eu | ||||
| 2014-03-25 | 2014-03-25 | https://usegalaxy.org | ||||||
| 2022-05-02 | 2022-05-03 | https://usegalaxy.eu | ||||||
| 2019-12-05 | 2019-12-17 | Peptide database search Conversion | Proteogenomics | https://usegalaxy.eu | ||||
| 2019-12-05 | 2019-12-17 | Proteogenomics | https://usegalaxy.eu | |||||
| 2021-03-19 | 2021-03-19 | Sequence read processing Phylogenetic analysis Taxonomic classification Phylogenetic tree generation Visualisation Sequence clustering Phylogenetic tree analysis DNA barcoding Phylogenetic tree reconstruction Sequencing quality control | metagenomics galaxy-training-network | https://usegalaxy.org.au | ||||
| 2020-06-17 | 2020-06-25 | Statistical calculation RNA-Seq analysis Transcriptome assembly Sequence composition calculation Sequence alignment Sequence annotation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2022-02-24 | 2022-02-24 | https://usegalaxy.eu | ||||||
| 2019-06-21 | 2019-06-26 | Formatting Taxonomic classification Sequence alignment analysis Phylogenetic inference Sequence comparison Primer removal Phylogenetic tree visualisation Sequence trimming Visualisation Conversion Read pre-processing Sequence similarity search Phylogenetic tree editing | GCC2019 | https://usegalaxy.eu | ||||
| 2019-06-21 | 2019-06-26 | GCC2019 | https://usegalaxy.eu | |||||
| 2016-06-15 | 2016-06-17 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org | |||||
| 2020-12-08 | 2021-04-06 | Metabolomics MSMS Annotation ESI | https://usegalaxy.fr | |||||
| 2022-12-26 | 2022-12-28 | Sequence composition calculation Statistical calculation Data handling Sequencing quality control | https://usegalaxy.org | |||||
| 2012-10-12 | 2012-11-13 | Sequence composition calculation Statistical calculation Sequencing quality control | for | https://usegalaxy.org | ||||
| 2024-03-03 | 2024-03-22 | Statistical calculation Taxonomic classification Genome assembly Sequence composition calculation Aggregation Coding region prediction Validation Genome annotation Visualisation Antimicrobial resistance prediction Gene prediction Sequence assembly visualisation Sequence assembly validation Sequencing quality control | https://usegalaxy.eu | |||||
| 2023-05-04 | 2023-05-04 | Statistical calculation RNA-Seq quantification Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming Read summarisation RNA-Seq analysis Read pre-processing Sequence alignment Sequencing quality control | https://usegalaxy.org.au | |||||
| 2023-05-02 | 2023-05-02 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2022-05-10 | 2022-05-12 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2022-05-09 | 2022-05-12 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Validation Differential gene expression analysis RNA-Seq analysis Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2020-05-14 | 2020-05-14 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2024-04-10 | 2024-04-10 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2023-05-04 | 2023-05-04 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2024-04-09 | 2024-04-09 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2024-03-24 | 2024-03-24 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2020-05-12 | 2020-05-14 | Statistical calculation Sequence trimming Sequence composition calculation Read pre-processing Primer removal Sequencing quality control | https://usegalaxy.org.au | |||||
| 2024-04-11 | 2024-04-11 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2023-05-04 | 2023-05-05 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2022-03-09 | 2022-03-09 | Genome visualisation | https://usegalaxy.org.au | |||||
| 2019-07-30 | 2019-07-30 | Statistical calculation Data handling Sequence composition calculation Mapping Read mapping Enrichment analysis Gene regulatory network analysis Validation Peak calling Sequencing quality control | https://usegalaxy.eu | |||||
| 2019-07-11 | 2019-07-30 | Statistical calculation Data handling Sequence composition calculation Mapping Read mapping Enrichment analysis Gene regulatory network analysis Validation Peak calling Sequencing quality control | https://usegalaxy.org | |||||
| 2024-04-11 | 2024-04-11 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Sequence trimming Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2024-04-11 | 2024-04-11 | Differential gene expression analysis RNA-Seq analysis | https://usegalaxy.org.au | |||||
| 2021-05-05 | 2021-05-06 | https://usegalaxy.org | ||||||
| 2024-03-17 | 2024-04-08 | Statistical calculation RNA-Seq quantification Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming Read summarisation RNA-Seq analysis Read pre-processing Sequence alignment Sequencing quality control | https://usegalaxy.org.au | |||||
| 2020-04-28 | 2020-05-14 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2021-05-04 | 2021-05-04 | Genome visualisation Nucleic acid sequence analysis | https://usegalaxy.org.au | |||||
| 2021-05-04 | 2021-05-04 | Read summarisation Nucleic acid sequence analysis RNA-Seq quantification | https://usegalaxy.org | |||||
| 2021-05-06 | 2021-05-07 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org | |||||
| 2023-04-26 | 2023-05-02 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2020-05-13 | 2020-05-14 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2021-05-05 | 2021-05-06 | Sequence alignment | https://usegalaxy.org.au | |||||
| 2020-05-12 | 2020-05-15 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2022-05-12 | 2022-05-12 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2023-12-15 | 2024-06-29 | Statistical calculation RNA-Seq quantification Data handling Gene functional annotation Sequence composition calculation Validation Differential gene expression analysis RNA-Seq analysis Read summarisation Sequence alignment Sequencing quality control | https://usegalaxy.eu | |||||
| 2024-03-06 | 2024-03-06 | CC-BY-4.0 | Bioimage imageJ | WorkflowHub | ||||
| 2021-05-06 | 2021-05-07 | Sequence composition calculation Statistical calculation Sequencing quality control | https://usegalaxy.org | |||||
| 2020-09-26 | 2020-11-17 | Read summarisation Sequence alignment RNA-Seq quantification | https://usegalaxy.org | |||||
| 2022-10-21 | 2022-11-22 | MIT | RNA-Seq quantification Taxonomic classification Genome alignment Genome indexing Read mapping Validation Sequence contamination filtering Visualisation Generation Filtering Sequence alignment Sequencing quality control | https://usegalaxy.eu | ||||
| 2022-11-02 | 2022-11-22 | MIT | Formatting RNA-Seq quantification Taxonomic classification Genome alignment Genome indexing Read mapping Validation Sequence contamination filtering SNP detection Visualisation Generation Filtering Sequence alignment Sequencing quality control | https://usegalaxy.eu | ||||
| 2022-05-31 | 2022-06-07 | https://usegalaxy.eu | ||||||
| 2022-06-07 | 2022-06-07 | MIT | ecology climate | https://usegalaxy.eu | ||||
| 2020-04-11 | 2020-04-11 | https://usegalaxy.eu | ||||||
| 2020-05-19 | 2020-05-19 | https://usegalaxy.eu | ||||||
| 2020-05-19 | 2020-05-19 | https://usegalaxy.eu | ||||||
| 2019-05-14 | 2020-05-19 | https://usegalaxy.eu | ||||||
| 2019-05-14 | 2020-05-19 | https://usegalaxy.eu | ||||||
| 2023-05-05 | 2023-05-05 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2024-04-11 | 2024-04-11 | Statistical calculation RNA-Seq quantification Sequence alignment Sequence composition calculation Primer removal Validation Differential gene expression analysis Sequence trimming RNA-Seq analysis Read pre-processing Read summarisation Sequencing quality control | https://usegalaxy.org.au | |||||
| 2012-06-06 | 2012-06-07 | https://usegalaxy.org | ||||||
| 2019-05-21 | 2019-05-22 | Validation Read summarisation Data handling Sequence alignment analysis RNA-Seq quantification Sequence alignment Sequencing quality control | https://usegalaxy.eu | |||||
| 2022-01-22 | 2022-02-07 | MIT | cheminformatics computational-chemistry | https://usegalaxy.eu | ||||
| 2019-12-05 | 2019-12-05 | https://usegalaxy.org |